| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21672864
Identifier: 21672864
GI number: 21672864
Start: 19930
End: 20250
Strand: Reverse
Name: 21672864
Synonym: CT0023
Alternate gene names: NA
Gene position: 20250-19930 (Counterclockwise)
Preceding gene: 21672865
Following gene: 161485733
Centisome position: 0.94
GC content: 52.02
Gene sequence:
>321_bases ATGCCTCCAAAGGAGATGACCATGTTAGATAATGACAGGAAAAAGGATAAATTCTCCGAGCAGTTTGGAGGAACGGTCAG AGCGCTATCGGAGTATCTCGGGATCGGGATTCAGATCGCCGCGAGTTTCGCACTTTTCGTCTTCCTCGGTTATTGGTCAG ATTCGAAGCTTGGCACCTCGCCTCTGCTTCTGCTGGCCGGAGTGCTTGTTGGCATGGTTGGCATGGCCCTTGTGCTCATG AAAACCATTCGGCAGGCAGACCGCGAGCATGACCGTTTACATCAACACACTCGAAACCACGAAAAGGATCGCCGGACATG A
Upstream 100 bases:
>100_bases AGTACAGCGATCTGGACACGCTGGTTGAATCGACCTGGAATGTTTACCGGGATGTTAACGCAGGTTCCGGCAGGCAATAG CTATTACCCGATAGCGGCTC
Downstream 100 bases:
>100_bases AGGCATTGTTTGATTTTCTTATAAAGTTATTTATCTTGTCGGTCATTTTATGGGGGGGTGTTTACTGGAGCTCGGCAAAC TATCCGATTGACATCAACTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MPPKEMTMLDNDRKKDKFSEQFGGTVRALSEYLGIGIQIAASFALFVFLGYWSDSKLGTSPLLLLAGVLVGMVGMALVLM KTIRQADREHDRLHQHTRNHEKDRRT
Sequences:
>Translated_106_residues MPPKEMTMLDNDRKKDKFSEQFGGTVRALSEYLGIGIQIAASFALFVFLGYWSDSKLGTSPLLLLAGVLVGMVGMALVLM KTIRQADREHDRLHQHTRNHEKDRRT >Mature_105_residues PPKEMTMLDNDRKKDKFSEQFGGTVRALSEYLGIGIQIAASFALFVFLGYWSDSKLGTSPLLLLAGVLVGMVGMALVLMK TIRQADREHDRLHQHTRNHEKDRRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12004; Mature: 11873
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPKEMTMLDNDRKKDKFSEQFGGTVRALSEYLGIGIQIAASFALFVFLGYWSDSKLGTS CCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCC PLLLLAGVLVGMVGMALVLMKTIRQADREHDRLHQHTRNHEKDRRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PPKEMTMLDNDRKKDKFSEQFGGTVRALSEYLGIGIQIAASFALFVFLGYWSDSKLGTS CCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCC PLLLLAGVLVGMVGMALVLMKTIRQADREHDRLHQHTRNHEKDRRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA