Click here to switch to the map view.

The map label for this gene is 47060339

Identifier: 47060339

GI number: 47060339

Start: 378

End: 686

Strand: Reverse

Name: 47060339

Synonym: mll9502

Alternate gene names: NA

Gene position: 686-378 (Counterclockwise)

Preceding gene: 47060340

Following gene: NA

Centisome position: 0.33

GC content: 57.28

Gene sequence:

>309_bases
TTGATCAGGGATTTTCCCAAGGGTGCCATGCTGCTCGCCGACAATGGCTATGATGCGAACGCGTTGCGCACGGCCATCAC
CGAGCGAAAGGCTTGGGCCAACATCCCGCCCAAGGCCAACCGCAAGGACCCGATCTGCTTCAGTCCCTTCCTCTACAAGG
CGCGCAACCTCGTAGAGCGCTTCTTCAATAAAGCCAAGCAGTTCCGGCGGATCGCGACACGCTACGACAAGCTGGCAGAA
AACTATCTTGCTGCGCTCAAGCTCGTCTCAACTCGCATCTGGCTACGCAGTAATGAGTCTACGCCCTAG

Upstream 100 bases:

>100_bases
CCTGACCACCAAAATCCATGCCCTTGTCGACGCTCAAGGGAGGCCGATCAAGCTAACGCTAACGGCAGGCCAGAAGAGCG
ACATCGCCTCCGCAGTCGAC

Downstream 100 bases:

>100_bases
AACCGAAGGATTACTCTTCCCCGCCGCGCAGCAAGCGCCAGATATCGCCCCAATAAGCCGTAGCGAGCGACGCCAGAGTC
GCCGCCGCCATACAGGTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase And Inactivated Derivatives-Like Protein; LOW QUALITY PROTEIN Transposase; Insertion Sequence Transposase Protein; ISSpo7 Transposase; Transposase Domain Protein; Transposase Is4-Like; Transposase IS4 Family; ISBm1 Transposase OrfB; ISSoc13 Transposase OrfB; ISSod6 Transposase; IS4 Insertion Sequence Transposase Protein; Transposase-Like Protein; Insertion Sequence/Transposase-Related Protein; Transposase Of; Transposase Of Unassigned Insertion Sequence; IS5 Family Transposase; IS5 Family Transposase OrfB; Insertion Sequence; Transposase IS5 Family Protein; LOW QUALITY PROTEIN IS4 Family Transposase

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MIRDFPKGAMLLADNGYDANALRTAITERKAWANIPPKANRKDPICFSPFLYKARNLVERFFNKAKQFRRIATRYDKLAE
NYLAALKLVSTRIWLRSNESTP

Sequences:

>Translated_102_residues
MIRDFPKGAMLLADNGYDANALRTAITERKAWANIPPKANRKDPICFSPFLYKARNLVERFFNKAKQFRRIATRYDKLAE
NYLAALKLVSTRIWLRSNESTP
>Mature_102_residues
MIRDFPKGAMLLADNGYDANALRTAITERKAWANIPPKANRKDPICFSPFLYKARNLVERFFNKAKQFRRIATRYDKLAE
NYLAALKLVSTRIWLRSNESTP

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11851; Mature: 11851

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRDFPKGAMLLADNGYDANALRTAITERKAWANIPPKANRKDPICFSPFLYKARNLVER
CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHH
FFNKAKQFRRIATRYDKLAENYLAALKLVSTRIWLRSNESTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIRDFPKGAMLLADNGYDANALRTAITERKAWANIPPKANRKDPICFSPFLYKARNLVER
CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHH
FFNKAKQFRRIATRYDKLAENYLAALKLVSTRIWLRSNESTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA