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The map label for this gene is yjbJ [H]

Identifier: 13488571

GI number: 13488571

Start: 198372

End: 199133

Strand: Direct

Name: yjbJ [H]

Synonym: mlr9745

Alternate gene names: 13488571

Gene position: 198372-199133 (Clockwise)

Preceding gene: 13488570

Following gene: 13488572

Centisome position: 95.23

GC content: 62.73

Gene sequence:

>762_bases
ATGAGTGGACCATGGGCGCCGAAATGTGCGAACGGAAGCCACCCCGTCAGTTGGTTGCCTGGAAGGCGAAAAGCATTTTG
TCTTATCGGTGGCATGCTGATCTTCTGTCAGGCAATGACGGGGGCCGTCGCACAATCGATATCGGCCTCACGCAAATCCG
CGGACGATCCTTATGCCGCGCATATAGCAGAGGCATCGCATCGCTTCCGCGTTCCTGAGCGTTGGATACGGGCAATCATG
CACCTCGAGAGCGCCCGCGACCCGCGCGCCGTTTCGCGAAAGGGGGCCGTGGGCTTGATGCAGATCATGCCCGGAACGTG
GGCTAAGCTGCGCCTTCGCCACCAGCTCGGCCGCGATCCCTATGATCCACACGACAACATCCTTGCCGGCACCGCCTATC
TTCGCGAGCTGTATGATCGATACGGTTCACCAGGCTTTCTCGCCGCCTATAATGCGGGGCCAGGGCGTTACGAAGCTTCC
TTGAAGGGCCGTCCGCTGCCGGCTGAGACCCGGGCCTATGTTGCGATGCTCCGCCCTTTCTGGGGCGGCGGTGATGCACC
CGGAGCGCTCACCGCCGGCCATGCCAAGGCCGTTACCTGGAAGGCTGCGCCGCTGTTCATAAACCGGCCCGGGTCCATGG
CCGCTTCCGATCTTTCGTCCGGCGAAGGCGCTTCCGTCGAGGTCTCGTCGCGCGAACTTTTCGCGGCCGGTTCGCAGCCG
CGCCAACTGTTCACTGGGTCCGACGTCCGGAGATCACAGTGA

Upstream 100 bases:

>100_bases
CGCTGTTTGGCCGCCGCTTCCGTGCCGGTCTCTTCCGATCCGACAACGGCTCCTGGTCACTGCGCTGGATCCGGCCGAAA
CCGCGGTCGGAGCGTGCTCA

Downstream 100 bases:

>100_bases
TGACGAAGTCTCCGTCAGATCGCGCCCGGGCGTCTCTTTGGACGTCGCAGCCTGTGAGGCGCGTAGGGCACAAGGCAACA
ACCGAGGGATGGCAAGATAA

Product: lytic transglycosylase

Products: N-Acetylmuramic Acid Residues; N-Acetylglucosamine Residues [C]

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MSGPWAPKCANGSHPVSWLPGRRKAFCLIGGMLIFCQAMTGAVAQSISASRKSADDPYAAHIAEASHRFRVPERWIRAIM
HLESARDPRAVSRKGAVGLMQIMPGTWAKLRLRHQLGRDPYDPHDNILAGTAYLRELYDRYGSPGFLAAYNAGPGRYEAS
LKGRPLPAETRAYVAMLRPFWGGGDAPGALTAGHAKAVTWKAAPLFINRPGSMAASDLSSGEGASVEVSSRELFAAGSQP
RQLFTGSDVRRSQ

Sequences:

>Translated_253_residues
MSGPWAPKCANGSHPVSWLPGRRKAFCLIGGMLIFCQAMTGAVAQSISASRKSADDPYAAHIAEASHRFRVPERWIRAIM
HLESARDPRAVSRKGAVGLMQIMPGTWAKLRLRHQLGRDPYDPHDNILAGTAYLRELYDRYGSPGFLAAYNAGPGRYEAS
LKGRPLPAETRAYVAMLRPFWGGGDAPGALTAGHAKAVTWKAAPLFINRPGSMAASDLSSGEGASVEVSSRELFAAGSQP
RQLFTGSDVRRSQ
>Mature_252_residues
SGPWAPKCANGSHPVSWLPGRRKAFCLIGGMLIFCQAMTGAVAQSISASRKSADDPYAAHIAEASHRFRVPERWIRAIMH
LESARDPRAVSRKGAVGLMQIMPGTWAKLRLRHQLGRDPYDPHDNILAGTAYLRELYDRYGSPGFLAAYNAGPGRYEASL
KGRPLPAETRAYVAMLRPFWGGGDAPGALTAGHAKAVTWKAAPLFINRPGSMAASDLSSGEGASVEVSSRELFAAGSQPR
QLFTGSDVRRSQ

Specific function: Murein-Degrading Enzyme. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

Organism=Escherichia coli, GI87082441, Length=148, Percent_Identity=35.1351351351351, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 27303; Mature: 27172

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPWAPKCANGSHPVSWLPGRRKAFCLIGGMLIFCQAMTGAVAQSISASRKSADDPYAA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
HIAEASHRFRVPERWIRAIMHLESARDPRAVSRKGAVGLMQIMPGTWAKLRLRHQLGRDP
HHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCCCEEEEHHCCCCHHHHHHHHHHCCCC
YDPHDNILAGTAYLRELYDRYGSPGFLAAYNAGPGRYEASLKGRPLPAETRAYVAMLRPF
CCCCCCEEHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHHC
WGGGDAPGALTAGHAKAVTWKAAPLFINRPGSMAASDLSSGEGASVEVSSRELFAAGSQP
CCCCCCCCCEECCCCEEEEEECCCEEEECCCCHHHHHCCCCCCCEEEECCCCEEECCCCC
RQLFTGSDVRRSQ
CEECCCCCCCCCC
>Mature Secondary Structure 
SGPWAPKCANGSHPVSWLPGRRKAFCLIGGMLIFCQAMTGAVAQSISASRKSADDPYAA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
HIAEASHRFRVPERWIRAIMHLESARDPRAVSRKGAVGLMQIMPGTWAKLRLRHQLGRDP
HHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCCCEEEEHHCCCCHHHHHHHHHHCCCC
YDPHDNILAGTAYLRELYDRYGSPGFLAAYNAGPGRYEASLKGRPLPAETRAYVAMLRPF
CCCCCCEEHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHHC
WGGGDAPGALTAGHAKAVTWKAAPLFINRPGSMAASDLSSGEGASVEVSSRELFAAGSQP
CCCCCCCCCEECCCCEEEEEECCCEEEECCCCHHHHHCCCCCCCEEEECCCCEEECCCCC
RQLFTGSDVRRSQ
CEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]