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The map label for this gene is 13488569

Identifier: 13488569

GI number: 13488569

Start: 197465

End: 198010

Strand: Direct

Name: 13488569

Synonym: mlr9742

Alternate gene names: NA

Gene position: 197465-198010 (Clockwise)

Preceding gene: 13488568

Following gene: 13488570

Centisome position: 94.79

GC content: 67.4

Gene sequence:

>546_bases
ATGAGCCGCGCCGCCTGCATAGCCGCAGCACTTGCGGCCGTCGCCGCGACGCTCGCGCCCGCTGCCGTGAAGATGCCGCC
GCTGCTTTTGTGGAACGCATCGGCCAGCGCGCCTCTTGGGCTCTATGCGATCAGGAAAATGGCCGTTCCGACGGCTGGCG
CGCTCGTTGTCGTCGAACCGCCAGACAAGGTCGCCAGGTTTGCCGCCGAGCGTGGCTACCTTCCGCTGGGCGTGCCGATG
CTCAAACACATCGAGGGACTTCCCGGGCAGCCAGTCTGCCGCCTCAGCCGCCTCATCACAGTCACCGGGCTTGCGGTTGG
CGTCGCACTTGAGCGCGACCGCAAAGGACGCGCCCTGCCTGATTGGCAGGGCTGCCGCGTCATCGCCGCCACCGAAATCT
TCGTCCTGAACCGGAAGGTCGAGGACAGTCTCGACGGCCGCTATTTCGGCCCGTTCCCAGCGAGCTCGATCGTCGGAGCC
GCGCGGCCGCTTTGGACCGACGAGAGGGGCGATGGCCACTACACCTGGCTCGCTCCGGCGAACTGA

Upstream 100 bases:

>100_bases
ATTGGCGTCAGACCCATAACCGTCTCATTGCCGGCGCAACGCCGCGCGCCTATTCGCTTGAGCAGCACCGGGCCTTTCTG
TTGCGCAAGCGAGCGACATC

Downstream 100 bases:

>100_bases
AATCCAGCCCACTGACAGAAAGAAGGAGGCACTCAATGGCCGAGATCGGCATCTTCCACAAAACTGAATCTGGTTACTCC
GGACGCATTCGAACACTGCT

Product: conjugal transfer protein; TraF

Products: NA

Alternate protein names: Conjugal Transfer Protein TraF; Conjugal Transfer TRAF Transmembrane Protein; TraF Peptidase; Peptidase; Type IV Secretory Pathway Protease TraF-Like Protein; Type IV Secretory Pathway Protease TraF; Plasmid Transfer Protein TraF; Conjugative Transfer Signal Peptidase TraF; Peptidase S; Raf Peptidase. Serine Peptidase. Merops Family; Plasmid Transfer Protein Traf; Conjugal Transfer Protein Traf; RaF Peptidase. Serine Peptidase. MEROPS Family; TraF Peptidase Serine Peptidase MEROPS Family; Conjugal Transfer TraF Transmembrane Protein; Traf Peptidase Serine Peptidase Merops Family; Transmembrane Anchor Conjugal Transfer Protein

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSRAACIAAALAAVAATLAPAAVKMPPLLLWNASASAPLGLYAIRKMAVPTAGALVVVEPPDKVARFAAERGYLPLGVPM
LKHIEGLPGQPVCRLSRLITVTGLAVGVALERDRKGRALPDWQGCRVIAATEIFVLNRKVEDSLDGRYFGPFPASSIVGA
ARPLWTDERGDGHYTWLAPAN

Sequences:

>Translated_181_residues
MSRAACIAAALAAVAATLAPAAVKMPPLLLWNASASAPLGLYAIRKMAVPTAGALVVVEPPDKVARFAAERGYLPLGVPM
LKHIEGLPGQPVCRLSRLITVTGLAVGVALERDRKGRALPDWQGCRVIAATEIFVLNRKVEDSLDGRYFGPFPASSIVGA
ARPLWTDERGDGHYTWLAPAN
>Mature_180_residues
SRAACIAAALAAVAATLAPAAVKMPPLLLWNASASAPLGLYAIRKMAVPTAGALVVVEPPDKVARFAAERGYLPLGVPML
KHIEGLPGQPVCRLSRLITVTGLAVGVALERDRKGRALPDWQGCRVIAATEIFVLNRKVEDSLDGRYFGPFPASSIVGAA
RPLWTDERGDGHYTWLAPAN

Specific function: Unknown

COG id: COG4959

COG function: function code OU; Type IV secretory pathway, protease TraF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19133; Mature: 19001

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAACIAAALAAVAATLAPAAVKMPPLLLWNASASAPLGLYAIRKMAVPTAGALVVVEP
CCHHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCCEEEEECC
PDKVARFAAERGYLPLGVPMLKHIEGLPGQPVCRLSRLITVTGLAVGVALERDRKGRALP
CHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCC
DWQGCRVIAATEIFVLNRKVEDSLDGRYFGPFPASSIVGAARPLWTDERGDGHYTWLAPA
CCCCCEEEEEEEEEEECCCHHHCCCCCEECCCCCHHHHHCCCCCCCCCCCCCCEEEEECC
N
C
>Mature Secondary Structure 
SRAACIAAALAAVAATLAPAAVKMPPLLLWNASASAPLGLYAIRKMAVPTAGALVVVEP
CHHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCCEEEEECC
PDKVARFAAERGYLPLGVPMLKHIEGLPGQPVCRLSRLITVTGLAVGVALERDRKGRALP
CHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCC
DWQGCRVIAATEIFVLNRKVEDSLDGRYFGPFPASSIVGAARPLWTDERGDGHYTWLAPA
CCCCCEEEEEEEEEEECCCHHHCCCCCEECCCCCHHHHHCCCCCCCCCCCCCCEEEEECC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA