| Definition | Mesorhizobium loti MAFF303099 plasmid pMLb, complete sequence. |
|---|---|
| Accession | NC_002682 |
| Length | 208,315 |
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The map label for this gene is 13488563
Identifier: 13488563
GI number: 13488563
Start: 191729
End: 192829
Strand: Direct
Name: 13488563
Synonym: mlr9736
Alternate gene names: NA
Gene position: 191729-192829 (Clockwise)
Preceding gene: 13488562
Following gene: 13488564
Centisome position: 92.04
GC content: 62.94
Gene sequence:
>1101_bases ATGGCCAAGTCGCAACACGCGTTCGTGCGCGGCAGCGCCTCGCTGTTTTATGAATGGCTGAACAAGCATGATGAAGGATT GCCGCAGGGGCCCGCTGTCTGGATCTGCGGCGACTGCCATCTTGGCAACCTGGGGGCGCTTGCGGACCTGGAAGGCGGCG TAGCGATTCAGATCCGGGATTTTGACCAGACCGTCATCGGCAACCCGGCACACGACGTCGTGCGGCTGGGCCTCTCGCTG GCTTCAGCCATCCGCAGTTCCGACCTGCCGGGCGTGACAACAGCGCACATGCTCGACAACCTCCTCGCCGGCTACATCAA GGCAGCGCCTTCGTCAGGCGCGCGGGGATCCAAGGACCTCCGAAAGCTGCTCAAACGCGCCGCGCACCGCCGCTGGCACA ACCTCGCCCTTGAGGGATTTGAAGGACAACAGAAGCAGTTGCCGCGGAACCGCCGGTTTTGGCCCTTGCATCGCCGCGAG CGCAGCCAGGTGCGCACCTTCTGCCAAGCTCTGGATATCTCAGGCCTGACTCCGGAAACGGAGCAGCACGGCAAGAACGG CTGGGAGTTCATGGATGCGGCGTACTGGATCAAAGGATGCAGTTCGCTTGGGGACCTGCGCTTTGCGGCCCTGATGCGGG GCAAGCATCATCGCATGGCGCTGCTCGACGTCAAGGAAGCGACGGCTGCGGCCGCTCCCCCGGCACTGCGGGTACAGATG CCGGGCGATCATGCCGAGCGCGTCCGGGTAGGCGCGCGCGCCATGTCTCCAAACCTTGGCGATCGCATGGTGTGCGGTAA GGTTGAGGGGAAGCCTGTTTTTGTCAGGGCGATATCGCCACGCGATATGAAACTCGAAATCGACCGGCTGACAAGTCGGC AGACACAGACGCTTGCCCGCCACCTCGGTTCGATCGTGGGCGAAGCGCACGGCCGCCAGATGGACGCCGCCGATTGGCGC AGTTGGACCCGCGAACTGTCGCACGCCGCCGGCGCGAACACTAAGACACCGTCGTGGTTATGGACAAGCGTCGTTGACCT GCTCGCAATTCATGAGCTTGCATATCTTGATCATTGCCGGCGGTTCGCTCTCGCAAACTAA
Upstream 100 bases:
>100_bases GCCTTTGGCATGTCTGGCCGCTACTGCGCCGAAGGGGGGAGACGCAGCCATGAACTTCTCGGATCGACCAGGGTATCTGG AACGGTTGCGCAACCGCAAA
Downstream 100 bases:
>100_bases TCGGTTTTCTGGAAACGCCACGACGCTGGAACCTCCAAGTCGATGGCTAGTTCATCCCTGACTCATGACATGAGAGAAAA CCGACATGACGACCTCGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MAKSQHAFVRGSASLFYEWLNKHDEGLPQGPAVWICGDCHLGNLGALADLEGGVAIQIRDFDQTVIGNPAHDVVRLGLSL ASAIRSSDLPGVTTAHMLDNLLAGYIKAAPSSGARGSKDLRKLLKRAAHRRWHNLALEGFEGQQKQLPRNRRFWPLHRRE RSQVRTFCQALDISGLTPETEQHGKNGWEFMDAAYWIKGCSSLGDLRFAALMRGKHHRMALLDVKEATAAAAPPALRVQM PGDHAERVRVGARAMSPNLGDRMVCGKVEGKPVFVRAISPRDMKLEIDRLTSRQTQTLARHLGSIVGEAHGRQMDAADWR SWTRELSHAAGANTKTPSWLWTSVVDLLAIHELAYLDHCRRFALAN
Sequences:
>Translated_366_residues MAKSQHAFVRGSASLFYEWLNKHDEGLPQGPAVWICGDCHLGNLGALADLEGGVAIQIRDFDQTVIGNPAHDVVRLGLSL ASAIRSSDLPGVTTAHMLDNLLAGYIKAAPSSGARGSKDLRKLLKRAAHRRWHNLALEGFEGQQKQLPRNRRFWPLHRRE RSQVRTFCQALDISGLTPETEQHGKNGWEFMDAAYWIKGCSSLGDLRFAALMRGKHHRMALLDVKEATAAAAPPALRVQM PGDHAERVRVGARAMSPNLGDRMVCGKVEGKPVFVRAISPRDMKLEIDRLTSRQTQTLARHLGSIVGEAHGRQMDAADWR SWTRELSHAAGANTKTPSWLWTSVVDLLAIHELAYLDHCRRFALAN >Mature_365_residues AKSQHAFVRGSASLFYEWLNKHDEGLPQGPAVWICGDCHLGNLGALADLEGGVAIQIRDFDQTVIGNPAHDVVRLGLSLA SAIRSSDLPGVTTAHMLDNLLAGYIKAAPSSGARGSKDLRKLLKRAAHRRWHNLALEGFEGQQKQLPRNRRFWPLHRRER SQVRTFCQALDISGLTPETEQHGKNGWEFMDAAYWIKGCSSLGDLRFAALMRGKHHRMALLDVKEATAAAAPPALRVQMP GDHAERVRVGARAMSPNLGDRMVCGKVEGKPVFVRAISPRDMKLEIDRLTSRQTQTLARHLGSIVGEAHGRQMDAADWRS WTRELSHAAGANTKTPSWLWTSVVDLLAIHELAYLDHCRRFALAN
Specific function: Unknown
COG id: COG4320
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40554; Mature: 40423
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSQHAFVRGSASLFYEWLNKHDEGLPQGPAVWICGDCHLGNLGALADLEGGVAIQIRD CCCCCCHHHHCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEECCCCEEEEEEC FDQTVIGNPAHDVVRLGLSLASAIRSSDLPGVTTAHMLDNLLAGYIKAAPSSGARGSKDL CCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH RKLLKRAAHRRWHNLALEGFEGQQKQLPRNRRFWPLHRRERSQVRTFCQALDISGLTPET HHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCH EQHGKNGWEFMDAAYWIKGCSSLGDLRFAALMRGKHHRMALLDVKEATAAAAPPALRVQM HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCEEEEEC PGDHAERVRVGARAMSPNLGDRMVCGKVEGKPVFVRAISPRDMKLEIDRLTSRQTQTLAR CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHH HLGSIVGEAHGRQMDAADWRSWTRELSHAAGANTKTPSWLWTSVVDLLAIHELAYLDHCR HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RFALAN HHHCCC >Mature Secondary Structure AKSQHAFVRGSASLFYEWLNKHDEGLPQGPAVWICGDCHLGNLGALADLEGGVAIQIRD CCCCCHHHHCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEECCCCEEEEEEC FDQTVIGNPAHDVVRLGLSLASAIRSSDLPGVTTAHMLDNLLAGYIKAAPSSGARGSKDL CCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH RKLLKRAAHRRWHNLALEGFEGQQKQLPRNRRFWPLHRRERSQVRTFCQALDISGLTPET HHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCH EQHGKNGWEFMDAAYWIKGCSSLGDLRFAALMRGKHHRMALLDVKEATAAAAPPALRVQM HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCEEEEEC PGDHAERVRVGARAMSPNLGDRMVCGKVEGKPVFVRAISPRDMKLEIDRLTSRQTQTLAR CCCHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHH HLGSIVGEAHGRQMDAADWRSWTRELSHAAGANTKTPSWLWTSVVDLLAIHELAYLDHCR HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RFALAN HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA