| Definition | Mesorhizobium loti MAFF303099 plasmid pMLb, complete sequence. |
|---|---|
| Accession | NC_002682 |
| Length | 208,315 |
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The map label for this gene is 13488562
Identifier: 13488562
GI number: 13488562
Start: 190601
End: 191098
Strand: Direct
Name: 13488562
Synonym: mlr9734
Alternate gene names: NA
Gene position: 190601-191098 (Clockwise)
Preceding gene: 13488561
Following gene: 13488563
Centisome position: 91.5
GC content: 66.27
Gene sequence:
>498_bases GTGAACCTTGTCGAGGCTCCTCCCGAGCTGCGCGCGGGGCAGGGCGCTTTCGACGTCCCGCTTGCCGCGGGCCGGCATGA CGAAGTCGGGCTTCACATGCGATCTTCGCCCGGCGGCACGCAACTGGCGCTTCTCGGCGACGCAAAGCCAGGCAAATCCC TTGCCGCCATCATCCCGCTCGACGACATGGCGCAAGACCGGCTCCAGGCTATCGAGCGGTTCATCCGCTCGATCCACAGG CAACACCTTCCCGACGCGCGATTGACCGCGGCCCAGCGCCGGCGCCTTGGTCATATGCTGCGATGCCTCGATGGCCGGGA GGAGCAGGCATCCCATTTTGAAGTGGCGACCGTCTTGTTCGGCCGTCGGCTGGTCAGCGCCGCCGACTGGCACGACTCGG CTTTTCGCTATCAGACGCATCGCCTCCTGCGCGATGGCTTGAAGATGGTGGAGCGCGGCTACCGCCAATTGCTGCGCGCG CGACGGCGCGTTTTCTGA
Upstream 100 bases:
>100_bases GCGTTGCGCAAGCGCTGGGGTTTGCAGTTTCGCCGCCAGGCCTGACCAATCCGCGGTCGAGCAGCCCGTCTATTGGGCGC CTCAGATCGACCCGGGGGTC
Downstream 100 bases:
>100_bases ACAGGGTTCCGTCCGGCGCCTGGGCCACTTATTGCGCTATCGGCAGGTACGACACTGGCGACTAGAAAAGCCCGTCGCAG CTTATACGCTTCAGCGAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MNLVEAPPELRAGQGAFDVPLAAGRHDEVGLHMRSSPGGTQLALLGDAKPGKSLAAIIPLDDMAQDRLQAIERFIRSIHR QHLPDARLTAAQRRRLGHMLRCLDGREEQASHFEVATVLFGRRLVSAADWHDSAFRYQTHRLLRDGLKMVERGYRQLLRA RRRVF
Sequences:
>Translated_165_residues MNLVEAPPELRAGQGAFDVPLAAGRHDEVGLHMRSSPGGTQLALLGDAKPGKSLAAIIPLDDMAQDRLQAIERFIRSIHR QHLPDARLTAAQRRRLGHMLRCLDGREEQASHFEVATVLFGRRLVSAADWHDSAFRYQTHRLLRDGLKMVERGYRQLLRA RRRVF >Mature_165_residues MNLVEAPPELRAGQGAFDVPLAAGRHDEVGLHMRSSPGGTQLALLGDAKPGKSLAAIIPLDDMAQDRLQAIERFIRSIHR QHLPDARLTAAQRRRLGHMLRCLDGREEQASHFEVATVLFGRRLVSAADWHDSAFRYQTHRLLRDGLKMVERGYRQLLRA RRRVF
Specific function: Unknown
COG id: COG5419
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18675; Mature: 18675
Theoretical pI: Translated: 11.39; Mature: 11.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLVEAPPELRAGQGAFDVPLAAGRHDEVGLHMRSSPGGTQLALLGDAKPGKSLAAIIPL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCEEEEECC DDMAQDRLQAIERFIRSIHRQHLPDARLTAAQRRRLGHMLRCLDGREEQASHFEVATVLF HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GRRLVSAADWHDSAFRYQTHRLLRDGLKMVERGYRQLLRARRRVF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNLVEAPPELRAGQGAFDVPLAAGRHDEVGLHMRSSPGGTQLALLGDAKPGKSLAAIIPL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCEEEEECC DDMAQDRLQAIERFIRSIHRQHLPDARLTAAQRRRLGHMLRCLDGREEQASHFEVATVLF HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GRRLVSAADWHDSAFRYQTHRLLRDGLKMVERGYRQLLRARRRVF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA