| Definition | Mesorhizobium loti MAFF303099 plasmid pMLb, complete sequence. |
|---|---|
| Accession | NC_002682 |
| Length | 208,315 |
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The map label for this gene is 13488555
Identifier: 13488555
GI number: 13488555
Start: 183638
End: 184987
Strand: Direct
Name: 13488555
Synonym: mlr9725
Alternate gene names: NA
Gene position: 183638-184987 (Clockwise)
Preceding gene: 13488550
Following gene: 13488556
Centisome position: 88.15
GC content: 58.96
Gene sequence:
>1350_bases ATGTCCAGAAACGATTTTCCGACGCCTGGGACGTTCACTATGATCGCGAAAGTAATGGCCGGCGCAACGCCAAGCCCGAT CCGCACCATTATTCGCGTTGCGGGGGGCGTCTCGGCCATGGCGATCATTGGCCAGTTCACTCTGGTCGCTGCCATCCCTC TGCTGGCTCGACTTTATTCGCCAGCCGATTTCGGTATTTTCACAATCTATCTGTCGATCGTAAATATCCTCGGCTCCATC GCGGCGCTTCGTTTCGAATCCTCGATCTACGTCGTTGAGAACAAGGTTCGAGGGCAGGTGGCGTTCAAACTCGTTCTCTT GGCTGTCTTCGTCACGTCGGTTACGACCTTGGCGGCTGGATATCTGCTGTTGCGCGTCGCGCCGGGGCGGCTCAGCCATC TTGTCTGGCTCGTTCCAATCGGGATGGCCGGCGCGGCCATCGCCGAAGCCATGAGCTGCTGGAGCCTGCGCTTTGGTTAC GTACGCGACTTCGCCATTGGACGCGTGATCCAACCGGCGACCATGGCATTTCTGCAATTGATCTTTGGCGTCGCCCAACT CGGAGGTGAGGCGATGGCCTATGCACATATCCTCAGCCAGGCAGTGCTCATATTAGTAATCGGCACCCGCATCCTGAGTT GGGAGGATGCGTCTGGCATCGTCCGAGCCCCGTGGCTGACCGTAGTCGCTGCGGCCAGACGAGAATACAAGTTTCCTTTG TTCGACCTTCCCGCAGCCCTCGCGGGCTTCACAATCATCAACCTTCCCGCAATTCTCATTGGATCGCTGTTTGGTGCCAG TTTCGCGGGATTTTTCGGAGTCGCCGCGCGCTTCGTGACCGCGCCAATCGCGTTGATCGCAAATCCCCTCGGCAATGTTT TTGTTGCTATAGCGAATGAAGGGCGTAACGACCGGAGTCTGCTCGGCACCGCCCGCGGCCTGCTGATTCTCGCGGCCGGC GTGATTGCCCTACCAATATTGGGGCTTGGCCTTGCCGCCCCTTATTTTGTCGTTCCACTTTTGGGCGAGCCTTGGATGGT CGCGGGACAGATTATGAGCGCTCTCGCGTGCATGGGGGCGGCGCAGGCACTGGCGACACCGCTTCAAATGGTCCCGACCA TCCTGCGGCGACAGGAGGTGCGGCTTCTGGTTGAGGTGGCCCGGACGTTGCTTATGTTTGGACCGCTCGCGGTCGGTGTT CACGCCGGCTGGCAACCGTTGCACGTGATTTATCTGATGGCAGCCGGCGGTGCGGTCGGATTTGCTTTGAGCGCGGCCGC CTCTCTCCTTCTCTTAACTCGCGACGCGCAATCGGATGGAGTGTGCACAACAACAGAGCTGGTTGAATGA
Upstream 100 bases:
>100_bases CCGATCTGGTCGACATCATACGAATGAATGATTGTGAGGCCCGGAACCGATTATAAGAATCTGAAAAAGCGAAAGGTCGT TTGCATAGGCGCGATCGCAC
Downstream 100 bases:
>100_bases GGGAGAACAGCACGAAGCCACCGCAGCCGCACATATCCGAACCCGCCGATGTTGCGGAAAGCCGTTTCATTTCGGTAGCC ATTCCGACTTTCCGTCGGCC
Product: O-antigen translocase-like protein
Products: NA
Alternate protein names: O-Antigen Translocase; O-Antigen Translocase-Like Protein
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MSRNDFPTPGTFTMIAKVMAGATPSPIRTIIRVAGGVSAMAIIGQFTLVAAIPLLARLYSPADFGIFTIYLSIVNILGSI AALRFESSIYVVENKVRGQVAFKLVLLAVFVTSVTTLAAGYLLLRVAPGRLSHLVWLVPIGMAGAAIAEAMSCWSLRFGY VRDFAIGRVIQPATMAFLQLIFGVAQLGGEAMAYAHILSQAVLILVIGTRILSWEDASGIVRAPWLTVVAAARREYKFPL FDLPAALAGFTIINLPAILIGSLFGASFAGFFGVAARFVTAPIALIANPLGNVFVAIANEGRNDRSLLGTARGLLILAAG VIALPILGLGLAAPYFVVPLLGEPWMVAGQIMSALACMGAAQALATPLQMVPTILRRQEVRLLVEVARTLLMFGPLAVGV HAGWQPLHVIYLMAAGGAVGFALSAAASLLLLTRDAQSDGVCTTTELVE
Sequences:
>Translated_449_residues MSRNDFPTPGTFTMIAKVMAGATPSPIRTIIRVAGGVSAMAIIGQFTLVAAIPLLARLYSPADFGIFTIYLSIVNILGSI AALRFESSIYVVENKVRGQVAFKLVLLAVFVTSVTTLAAGYLLLRVAPGRLSHLVWLVPIGMAGAAIAEAMSCWSLRFGY VRDFAIGRVIQPATMAFLQLIFGVAQLGGEAMAYAHILSQAVLILVIGTRILSWEDASGIVRAPWLTVVAAARREYKFPL FDLPAALAGFTIINLPAILIGSLFGASFAGFFGVAARFVTAPIALIANPLGNVFVAIANEGRNDRSLLGTARGLLILAAG VIALPILGLGLAAPYFVVPLLGEPWMVAGQIMSALACMGAAQALATPLQMVPTILRRQEVRLLVEVARTLLMFGPLAVGV HAGWQPLHVIYLMAAGGAVGFALSAAASLLLLTRDAQSDGVCTTTELVE >Mature_448_residues SRNDFPTPGTFTMIAKVMAGATPSPIRTIIRVAGGVSAMAIIGQFTLVAAIPLLARLYSPADFGIFTIYLSIVNILGSIA ALRFESSIYVVENKVRGQVAFKLVLLAVFVTSVTTLAAGYLLLRVAPGRLSHLVWLVPIGMAGAAIAEAMSCWSLRFGYV RDFAIGRVIQPATMAFLQLIFGVAQLGGEAMAYAHILSQAVLILVIGTRILSWEDASGIVRAPWLTVVAAARREYKFPLF DLPAALAGFTIINLPAILIGSLFGASFAGFFGVAARFVTAPIALIANPLGNVFVAIANEGRNDRSLLGTARGLLILAAGV IALPILGLGLAAPYFVVPLLGEPWMVAGQIMSALACMGAAQALATPLQMVPTILRRQEVRLLVEVARTLLMFGPLAVGVH AGWQPLHVIYLMAAGGAVGFALSAAASLLLLTRDAQSDGVCTTTELVE
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47198; Mature: 47067
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNDFPTPGTFTMIAKVMAGATPSPIRTIIRVAGGVSAMAIIGQFTLVAAIPLLARLYS CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC PADFGIFTIYLSIVNILGSIAALRFESSIYVVENKVRGQVAFKLVLLAVFVTSVTTLAAG CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH YLLLRVAPGRLSHLVWLVPIGMAGAAIAEAMSCWSLRFGYVRDFAIGRVIQPATMAFLQL HHHEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH IFGVAQLGGEAMAYAHILSQAVLILVIGTRILSWEDASGIVRAPWLTVVAAARREYKFPL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHCCCCC FDLPAALAGFTIINLPAILIGSLFGASFAGFFGVAARFVTAPIALIANPLGNVFVAIANE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC GRNDRSLLGTARGLLILAAGVIALPILGLGLAAPYFVVPLLGEPWMVAGQIMSALACMGA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AQALATPLQMVPTILRRQEVRLLVEVARTLLMFGPLAVGVHAGWQPLHVIYLMAAGGAVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHH FALSAAASLLLLTRDAQSDGVCTTTELVE HHHHHHHHHHHEEECCCCCCCCCHHHHCC >Mature Secondary Structure SRNDFPTPGTFTMIAKVMAGATPSPIRTIIRVAGGVSAMAIIGQFTLVAAIPLLARLYS CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC PADFGIFTIYLSIVNILGSIAALRFESSIYVVENKVRGQVAFKLVLLAVFVTSVTTLAAG CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH YLLLRVAPGRLSHLVWLVPIGMAGAAIAEAMSCWSLRFGYVRDFAIGRVIQPATMAFLQL HHHEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH IFGVAQLGGEAMAYAHILSQAVLILVIGTRILSWEDASGIVRAPWLTVVAAARREYKFPL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHCCCCC FDLPAALAGFTIINLPAILIGSLFGASFAGFFGVAARFVTAPIALIANPLGNVFVAIANE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC GRNDRSLLGTARGLLILAAGVIALPILGLGLAAPYFVVPLLGEPWMVAGQIMSALACMGA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AQALATPLQMVPTILRRQEVRLLVEVARTLLMFGPLAVGVHAGWQPLHVIYLMAAGGAVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHH FALSAAASLLLLTRDAQSDGVCTTTELVE HHHHHHHHHHHEEECCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA