| Definition | Mesorhizobium loti MAFF303099 plasmid pMLb, complete sequence. |
|---|---|
| Accession | NC_002682 |
| Length | 208,315 |
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The map label for this gene is 13488552
Identifier: 13488552
GI number: 13488552
Start: 178719
End: 179483
Strand: Reverse
Name: 13488552
Synonym: mll9721
Alternate gene names: NA
Gene position: 179483-178719 (Counterclockwise)
Preceding gene: 13488553
Following gene: 13488551
Centisome position: 86.16
GC content: 55.16
Gene sequence:
>765_bases ATGACACTCCATTACACATCAGGTGGATCAGCCGCAGAAATCGCAACAGCCGGCTTCAATCTGGTTGACGTTTCATCCGT CGAGCAGCTCAACGCTCTGCCAGCCGGGATGAAGGGCTTGGTCTGGCTCGACGAGGCTAACGGGGCATCATTGTCCTTCA TCCAGAAAGTCACCCCCTTCATCGGCAATCCGAAGCTATTTGGCTTCTTCCTCGCCGACGAGCCGGATCCCACCGGCAAA TGGGGTGTCTACGCAACCGCCGACAACCTGAAGGCGGAGTCCGACTGGATCCATTCCAATTTGCCAGGCGCCAAGACCTT TATCACCATGATGAACATGGGGTCTGCCGCGAATCCGGACTTTTCGAACACATTCAATCCTGCCAACACGCATATCGATT ACTACGGAGTGGATCCCTATCCGGTGCAAACTGGAACAAGTGCGGTCGACTACAACATGATCGACAGAACCGTGGCGGCA GCCGTGGCGTCGGGCGTCCCGAACAGCCAGATCGTTCCCGTCTATCAGACGTTTGGAGGCGGCAACTGGACCACCGATAC GGATGGCAAATTTGTCGTCCCTTCCACGTCCCAGATGCAGACAATGATGGATCATTGGGACCATCTGGTTCCGTCACCCG CCTTCGACTACGCGTATGCCTGGGGTTCGCAACAAGGCGACACAGCGCTTGGAAACTCGCCGGAACTGCAAGCCTTTTTC CTTAAACATAATCTCCATAATGTCGATGATCTCCCCCGTCGATAA
Upstream 100 bases:
>100_bases ATAGAGAGCGCCTTCCTGACGAGCGGCAGGTGAGAGCGGAGGATTTCTGGTTCATCGTACCTTTCAAGCCTGGTCGTTTC GAATCAAAAGAGGAAATCGG
Downstream 100 bases:
>100_bases CGTTCTAAGTCGGAGGATCCAATGAGCCATCCTGCGTTCCAGAACGAGTTCGGAAACGACGTTGAGTTCGGGGAAATCGT TTCGATCATCGGCTGGTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTLHYTSGGSAAEIATAGFNLVDVSSVEQLNALPAGMKGLVWLDEANGASLSFIQKVTPFIGNPKLFGFFLADEPDPTGK WGVYATADNLKAESDWIHSNLPGAKTFITMMNMGSAANPDFSNTFNPANTHIDYYGVDPYPVQTGTSAVDYNMIDRTVAA AVASGVPNSQIVPVYQTFGGGNWTTDTDGKFVVPSTSQMQTMMDHWDHLVPSPAFDYAYAWGSQQGDTALGNSPELQAFF LKHNLHNVDDLPRR
Sequences:
>Translated_254_residues MTLHYTSGGSAAEIATAGFNLVDVSSVEQLNALPAGMKGLVWLDEANGASLSFIQKVTPFIGNPKLFGFFLADEPDPTGK WGVYATADNLKAESDWIHSNLPGAKTFITMMNMGSAANPDFSNTFNPANTHIDYYGVDPYPVQTGTSAVDYNMIDRTVAA AVASGVPNSQIVPVYQTFGGGNWTTDTDGKFVVPSTSQMQTMMDHWDHLVPSPAFDYAYAWGSQQGDTALGNSPELQAFF LKHNLHNVDDLPRR >Mature_253_residues TLHYTSGGSAAEIATAGFNLVDVSSVEQLNALPAGMKGLVWLDEANGASLSFIQKVTPFIGNPKLFGFFLADEPDPTGKW GVYATADNLKAESDWIHSNLPGAKTFITMMNMGSAANPDFSNTFNPANTHIDYYGVDPYPVQTGTSAVDYNMIDRTVAAA VASGVPNSQIVPVYQTFGGGNWTTDTDGKFVVPSTSQMQTMMDHWDHLVPSPAFDYAYAWGSQQGDTALGNSPELQAFFL KHNLHNVDDLPRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27439; Mature: 27307
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLHYTSGGSAAEIATAGFNLVDVSSVEQLNALPAGMKGLVWLDEANGASLSFIQKVTPF CEEEECCCCCCEEHHHCCCCEEECCHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHC IGNPKLFGFFLADEPDPTGKWGVYATADNLKAESDWIHSNLPGAKTFITMMNMGSAANPD CCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCHHHCCCCCHHHEEEEHHCCCCCCCC FSNTFNPANTHIDYYGVDPYPVQTGTSAVDYNMIDRTVAAAVASGVPNSQIVPVYQTFGG CCCCCCCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCEEEEEEECCC GNWTTDTDGKFVVPSTSQMQTMMDHWDHLVPSPAFDYAYAWGSQQGDTALGNSPELQAFF CCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCEEEE LKHNLHNVDDLPRR EECCCCCCCCCCCC >Mature Secondary Structure TLHYTSGGSAAEIATAGFNLVDVSSVEQLNALPAGMKGLVWLDEANGASLSFIQKVTPF EEEECCCCCCEEHHHCCCCEEECCHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHC IGNPKLFGFFLADEPDPTGKWGVYATADNLKAESDWIHSNLPGAKTFITMMNMGSAANPD CCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCHHHCCCCCHHHEEEEHHCCCCCCCC FSNTFNPANTHIDYYGVDPYPVQTGTSAVDYNMIDRTVAAAVASGVPNSQIVPVYQTFGG CCCCCCCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCEEEEEEECCC GNWTTDTDGKFVVPSTSQMQTMMDHWDHLVPSPAFDYAYAWGSQQGDTALGNSPELQAFF CCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCEEEE LKHNLHNVDDLPRR EECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA