| Definition | Mesorhizobium loti MAFF303099 plasmid pMLb, complete sequence. |
|---|---|
| Accession | NC_002682 |
| Length | 208,315 |
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The map label for this gene is 13488549
Identifier: 13488549
GI number: 13488549
Start: 175119
End: 176402
Strand: Reverse
Name: 13488549
Synonym: mll9718
Alternate gene names: NA
Gene position: 176402-175119 (Counterclockwise)
Preceding gene: 13488551
Following gene: 13488545
Centisome position: 84.68
GC content: 58.33
Gene sequence:
>1284_bases ATGACACTCCATTACACATCAGGTGGATCAGCCGCGGACGTCGCAACGGCCGGCTTCAATCTGGTTGATGTTCAATCCGT CGACGAACTCAACGCGCTGCCAGCCGGGATGAAGGGCTTGGTCTGGCTCAACGAGGTCGATGGAACATCATCGTCCTTCA TCCAGAAAGTCACCCCCTTCATCGGCAATCCGAAGGTCTTTGGCTTTTTCCTCGCCGACGAGCCGGATCCCACCGGCAAA TGGGGTGTCTACGCAACCGCCGACAACCTGAAAGCGGAGTCCGACTGGATCCATTCCAATTTGCCAGGCGCCAAGACCTT TATCACCATGATGAACATGGGGTCTGCCGCGAATCCGGACTTTTCGAACACATTCAATCCTGCCAACACGCATATCGATT ACTACGGAGTGGATCCCTATCCGGTGCAAACTGGAACAAGTGCGGTCGACTACAACATGATCGACAGAACCGTGGCGGCA GCCGTGGCGTCGGGCGTCCCGAACAGCCAGATCGTTCCCGTCTATCAGACGTTCGGAGGCGGCAACTGGACCACCGATAC GGATGGCAAATTTGTCGTCCCTTCCACGTCCCAGATGCAGACAATGATGGATCATTGGGACCAGCTGGTTCCGTCACCCG CCTTCGACTACGCGTATGCCTGGGGTTCGCAACAAGGCGACACAGCGCTTGGAAACTCGCCGGAACTGCAAGCCTTTTTC CAGCAACACAATCTAAGCAGTGCCGCAGGCACTCCCATCACGTCTGATACCTCCAGTCCTCCCAGCACCACTGTTGCCCT CGGTGCTCCTACCACCCCCAGTGCTCCCAGCACCTCCAGTGCACCGAGCGCTCCATTTGGCGACAATCCCAGCGATGGTA GATATCATCACATTAATGGTGCCGATTTGCCCCACGCAGTCCAGAGTGCCGATCATGTCGCCAATGCCAGCCAGGGGGTG ACAGAATCGGCTGGCGGCAGAGGCCCGGTGAGCGTCGTCGACGGCAGCGATGCCTTCGTATTCAGCACCGCTCCCGCGGC CGGAAATGCGGACAGGGCTCCGGACTTCAGCGTCTCCCACCACCAGCCTCACCTCGACCACGCCTTGGGCCTTCGCACGG ACGCCCCGACAGCCGCGCTTTTCGCCGATCCAGGCGCGCAACATGGTGGCGACCACATCATCTACAACAGTTCTACCGGA GCGCTTTCTTTCGATAGCCATGCCAGCAGTGAAGACTCGCATCATATAGCGTTCGCCCATTCCCCAGGTCTCTTCATGAC TTGA
Upstream 100 bases:
>100_bases CAAAGATTCTATCAACGAGTGCCGGTATTTGATTATGCGCTAATGTACGCCTTCCGGTAAGCAGGGGTCGGGGCGTTGTC GAATCAAATGAGGAAATCGG
Downstream 100 bases:
>100_bases AAGAGTCTTTTTAGAAGTGTGAACCGGCCTTATTGTGGGTAATTGTCAATCCGAGTTGTCGTTCTGTAATCGTCGGGCAT GGTCCTTTCCGAGGTCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MTLHYTSGGSAADVATAGFNLVDVQSVDELNALPAGMKGLVWLNEVDGTSSSFIQKVTPFIGNPKVFGFFLADEPDPTGK WGVYATADNLKAESDWIHSNLPGAKTFITMMNMGSAANPDFSNTFNPANTHIDYYGVDPYPVQTGTSAVDYNMIDRTVAA AVASGVPNSQIVPVYQTFGGGNWTTDTDGKFVVPSTSQMQTMMDHWDQLVPSPAFDYAYAWGSQQGDTALGNSPELQAFF QQHNLSSAAGTPITSDTSSPPSTTVALGAPTTPSAPSTSSAPSAPFGDNPSDGRYHHINGADLPHAVQSADHVANASQGV TESAGGRGPVSVVDGSDAFVFSTAPAAGNADRAPDFSVSHHQPHLDHALGLRTDAPTAALFADPGAQHGGDHIIYNSSTG ALSFDSHASSEDSHHIAFAHSPGLFMT
Sequences:
>Translated_427_residues MTLHYTSGGSAADVATAGFNLVDVQSVDELNALPAGMKGLVWLNEVDGTSSSFIQKVTPFIGNPKVFGFFLADEPDPTGK WGVYATADNLKAESDWIHSNLPGAKTFITMMNMGSAANPDFSNTFNPANTHIDYYGVDPYPVQTGTSAVDYNMIDRTVAA AVASGVPNSQIVPVYQTFGGGNWTTDTDGKFVVPSTSQMQTMMDHWDQLVPSPAFDYAYAWGSQQGDTALGNSPELQAFF QQHNLSSAAGTPITSDTSSPPSTTVALGAPTTPSAPSTSSAPSAPFGDNPSDGRYHHINGADLPHAVQSADHVANASQGV TESAGGRGPVSVVDGSDAFVFSTAPAAGNADRAPDFSVSHHQPHLDHALGLRTDAPTAALFADPGAQHGGDHIIYNSSTG ALSFDSHASSEDSHHIAFAHSPGLFMT >Mature_426_residues TLHYTSGGSAADVATAGFNLVDVQSVDELNALPAGMKGLVWLNEVDGTSSSFIQKVTPFIGNPKVFGFFLADEPDPTGKW GVYATADNLKAESDWIHSNLPGAKTFITMMNMGSAANPDFSNTFNPANTHIDYYGVDPYPVQTGTSAVDYNMIDRTVAAA VASGVPNSQIVPVYQTFGGGNWTTDTDGKFVVPSTSQMQTMMDHWDQLVPSPAFDYAYAWGSQQGDTALGNSPELQAFFQ QHNLSSAAGTPITSDTSSPPSTTVALGAPTTPSAPSTSSAPSAPFGDNPSDGRYHHINGADLPHAVQSADHVANASQGVT ESAGGRGPVSVVDGSDAFVFSTAPAAGNADRAPDFSVSHHQPHLDHALGLRTDAPTAALFADPGAQHGGDHIIYNSSTGA LSFDSHASSEDSHHIAFAHSPGLFMT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44506; Mature: 44374
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLHYTSGGSAADVATAGFNLVDVQSVDELNALPAGMKGLVWLNEVDGTSSSFIQKVTPF CEEEECCCCCCCHHHHCCCCEEECCCHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHC IGNPKVFGFFLADEPDPTGKWGVYATADNLKAESDWIHSNLPGAKTFITMMNMGSAANPD CCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCHHHCCCCCHHHEEEEHHCCCCCCCC FSNTFNPANTHIDYYGVDPYPVQTGTSAVDYNMIDRTVAAAVASGVPNSQIVPVYQTFGG CCCCCCCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEEECCC GNWTTDTDGKFVVPSTSQMQTMMDHWDQLVPSPAFDYAYAWGSQQGDTALGNSPELQAFF CCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHHH QQHNLSSAAGTPITSDTSSPPSTTVALGAPTTPSAPSTSSAPSAPFGDNPSDGRYHHING HHHCCCHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC ADLPHAVQSADHVANASQGVTESAGGRGPVSVVDGSDAFVFSTAPAAGNADRAPDFSVSH CCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCC HQPHLDHALGLRTDAPTAALFADPGAQHGGDHIIYNSSTGALSFDSHASSEDSHHIAFAH CCCCHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCCCCCEEEEEE SPGLFMT CCCCCCC >Mature Secondary Structure TLHYTSGGSAADVATAGFNLVDVQSVDELNALPAGMKGLVWLNEVDGTSSSFIQKVTPF EEEECCCCCCCHHHHCCCCEEECCCHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHC IGNPKVFGFFLADEPDPTGKWGVYATADNLKAESDWIHSNLPGAKTFITMMNMGSAANPD CCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCHHHCCCCCHHHEEEEHHCCCCCCCC FSNTFNPANTHIDYYGVDPYPVQTGTSAVDYNMIDRTVAAAVASGVPNSQIVPVYQTFGG CCCCCCCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEEECCC GNWTTDTDGKFVVPSTSQMQTMMDHWDQLVPSPAFDYAYAWGSQQGDTALGNSPELQAFF CCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHHH QQHNLSSAAGTPITSDTSSPPSTTVALGAPTTPSAPSTSSAPSAPFGDNPSDGRYHHING HHHCCCHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC ADLPHAVQSADHVANASQGVTESAGGRGPVSVVDGSDAFVFSTAPAAGNADRAPDFSVSH CCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCC HQPHLDHALGLRTDAPTAALFADPGAQHGGDHIIYNSSTGALSFDSHASSEDSHHIAFAH CCCCHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCEEECCCCCCCCCCEEEEEE SPGLFMT CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA