Definition Mesorhizobium loti MAFF303099 plasmid pMLb, complete sequence.
Accession NC_002682
Length 208,315

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The map label for this gene is 13488545

Identifier: 13488545

GI number: 13488545

Start: 172049

End: 172615

Strand: Reverse

Name: 13488545

Synonym: mll9714

Alternate gene names: NA

Gene position: 172615-172049 (Counterclockwise)

Preceding gene: 13488549

Following gene: 13488543

Centisome position: 82.86

GC content: 59.96

Gene sequence:

>567_bases
GTGAACACGGCGGCCTGGAGGTTGCGTTCGGACGTTGAAGAGCGGCTCCCTGGCCCGGAAGCTCTGCTGGACTGGTTTCA
TGCCAACGACTTGCTTTCCCGTGGCGAACGAACTGCGTTGCAGAGGGCCTGGAAATCCGACGTCGAGGCTGCCAACTCCC
TTTGTGAGAGCGCGATCGCTTTGCGCGAACTGATCTACAATCTGTTGATTGCGCGGATCGGTGGCCAGACGCCGCGCACC
AAGGACCTTGAGGCCTTCAATAATTTCCTGACCGCTTGCGGGGCGGGCGCAACCCTCGTTTGGCGCGCAGGCGACTACGG
TTGGCGCGCGACAAAGGGCATGGCGAGCCTTCTAACTCCGATCACCCTGTCGGCTGCTGAGCTGCTGACGGGAATCCGCT
CAGGCAAAGTCAGGCAGTGTCAGGATGATAGAGGGTGCGGCTGGCTTTTTGTCGACGAGAGCAGAGCCCAGAACCGCCGA
TGGTGCTCGATGGGAGATTGTGGAAATCGCGCGAAGGCGCATCGCCACTATCAACGAGCAAAGGGGCATGACCTGAAGTC
AAATTAG

Upstream 100 bases:

>100_bases
AAGCGGCATGAGCCCGATTGGTTCCACCAGCTCTCCAAAATCAAGTGTCACGCGCGTTGCGAAGCACCATCTCGCGAACG
AGGATCTGGCGATCCGCTTT

Downstream 100 bases:

>100_bases
CCGACCTGCTCGACCGACAATGTCCCAGCCGGCAACGGCCTAATCAATGTTTTGGCGGAGACCGACGGATCGAGCCAAGC
GGCCCAATCCTTCCGTTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MNTAAWRLRSDVEERLPGPEALLDWFHANDLLSRGERTALQRAWKSDVEAANSLCESAIALRELIYNLLIARIGGQTPRT
KDLEAFNNFLTACGAGATLVWRAGDYGWRATKGMASLLTPITLSAAELLTGIRSGKVRQCQDDRGCGWLFVDESRAQNRR
WCSMGDCGNRAKAHRHYQRAKGHDLKSN

Sequences:

>Translated_188_residues
MNTAAWRLRSDVEERLPGPEALLDWFHANDLLSRGERTALQRAWKSDVEAANSLCESAIALRELIYNLLIARIGGQTPRT
KDLEAFNNFLTACGAGATLVWRAGDYGWRATKGMASLLTPITLSAAELLTGIRSGKVRQCQDDRGCGWLFVDESRAQNRR
WCSMGDCGNRAKAHRHYQRAKGHDLKSN
>Mature_188_residues
MNTAAWRLRSDVEERLPGPEALLDWFHANDLLSRGERTALQRAWKSDVEAANSLCESAIALRELIYNLLIARIGGQTPRT
KDLEAFNNFLTACGAGATLVWRAGDYGWRATKGMASLLTPITLSAAELLTGIRSGKVRQCQDDRGCGWLFVDESRAQNRR
WCSMGDCGNRAKAHRHYQRAKGHDLKSN

Specific function: Unknown

COG id: COG5516

COG function: function code R; Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20975; Mature: 20975

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTAAWRLRSDVEERLPGPEALLDWFHANDLLSRGERTALQRAWKSDVEAANSLCESAIA
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRELIYNLLIARIGGQTPRTKDLEAFNNFLTACGAGATLVWRAGDYGWRATKGMASLLTP
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH
ITLSAAELLTGIRSGKVRQCQDDRGCGWLFVDESRAQNRRWCSMGDCGNRAKAHRHYQRA
HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCHHHHHHHHHHH
KGHDLKSN
CCCCCCCC
>Mature Secondary Structure
MNTAAWRLRSDVEERLPGPEALLDWFHANDLLSRGERTALQRAWKSDVEAANSLCESAIA
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRELIYNLLIARIGGQTPRTKDLEAFNNFLTACGAGATLVWRAGDYGWRATKGMASLLTP
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH
ITLSAAELLTGIRSGKVRQCQDDRGCGWLFVDESRAQNRRWCSMGDCGNRAKAHRHYQRA
HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCHHHHHHHHHHH
KGHDLKSN
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA