| Definition | Mesorhizobium loti MAFF303099 plasmid pMLb, complete sequence. |
|---|---|
| Accession | NC_002682 |
| Length | 208,315 |
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The map label for this gene is 13488545
Identifier: 13488545
GI number: 13488545
Start: 172049
End: 172615
Strand: Reverse
Name: 13488545
Synonym: mll9714
Alternate gene names: NA
Gene position: 172615-172049 (Counterclockwise)
Preceding gene: 13488549
Following gene: 13488543
Centisome position: 82.86
GC content: 59.96
Gene sequence:
>567_bases GTGAACACGGCGGCCTGGAGGTTGCGTTCGGACGTTGAAGAGCGGCTCCCTGGCCCGGAAGCTCTGCTGGACTGGTTTCA TGCCAACGACTTGCTTTCCCGTGGCGAACGAACTGCGTTGCAGAGGGCCTGGAAATCCGACGTCGAGGCTGCCAACTCCC TTTGTGAGAGCGCGATCGCTTTGCGCGAACTGATCTACAATCTGTTGATTGCGCGGATCGGTGGCCAGACGCCGCGCACC AAGGACCTTGAGGCCTTCAATAATTTCCTGACCGCTTGCGGGGCGGGCGCAACCCTCGTTTGGCGCGCAGGCGACTACGG TTGGCGCGCGACAAAGGGCATGGCGAGCCTTCTAACTCCGATCACCCTGTCGGCTGCTGAGCTGCTGACGGGAATCCGCT CAGGCAAAGTCAGGCAGTGTCAGGATGATAGAGGGTGCGGCTGGCTTTTTGTCGACGAGAGCAGAGCCCAGAACCGCCGA TGGTGCTCGATGGGAGATTGTGGAAATCGCGCGAAGGCGCATCGCCACTATCAACGAGCAAAGGGGCATGACCTGAAGTC AAATTAG
Upstream 100 bases:
>100_bases AAGCGGCATGAGCCCGATTGGTTCCACCAGCTCTCCAAAATCAAGTGTCACGCGCGTTGCGAAGCACCATCTCGCGAACG AGGATCTGGCGATCCGCTTT
Downstream 100 bases:
>100_bases CCGACCTGCTCGACCGACAATGTCCCAGCCGGCAACGGCCTAATCAATGTTTTGGCGGAGACCGACGGATCGAGCCAAGC GGCCCAATCCTTCCGTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MNTAAWRLRSDVEERLPGPEALLDWFHANDLLSRGERTALQRAWKSDVEAANSLCESAIALRELIYNLLIARIGGQTPRT KDLEAFNNFLTACGAGATLVWRAGDYGWRATKGMASLLTPITLSAAELLTGIRSGKVRQCQDDRGCGWLFVDESRAQNRR WCSMGDCGNRAKAHRHYQRAKGHDLKSN
Sequences:
>Translated_188_residues MNTAAWRLRSDVEERLPGPEALLDWFHANDLLSRGERTALQRAWKSDVEAANSLCESAIALRELIYNLLIARIGGQTPRT KDLEAFNNFLTACGAGATLVWRAGDYGWRATKGMASLLTPITLSAAELLTGIRSGKVRQCQDDRGCGWLFVDESRAQNRR WCSMGDCGNRAKAHRHYQRAKGHDLKSN >Mature_188_residues MNTAAWRLRSDVEERLPGPEALLDWFHANDLLSRGERTALQRAWKSDVEAANSLCESAIALRELIYNLLIARIGGQTPRT KDLEAFNNFLTACGAGATLVWRAGDYGWRATKGMASLLTPITLSAAELLTGIRSGKVRQCQDDRGCGWLFVDESRAQNRR WCSMGDCGNRAKAHRHYQRAKGHDLKSN
Specific function: Unknown
COG id: COG5516
COG function: function code R; Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20975; Mature: 20975
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTAAWRLRSDVEERLPGPEALLDWFHANDLLSRGERTALQRAWKSDVEAANSLCESAIA CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRELIYNLLIARIGGQTPRTKDLEAFNNFLTACGAGATLVWRAGDYGWRATKGMASLLTP HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH ITLSAAELLTGIRSGKVRQCQDDRGCGWLFVDESRAQNRRWCSMGDCGNRAKAHRHYQRA HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCHHHHHHHHHHH KGHDLKSN CCCCCCCC >Mature Secondary Structure MNTAAWRLRSDVEERLPGPEALLDWFHANDLLSRGERTALQRAWKSDVEAANSLCESAIA CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRELIYNLLIARIGGQTPRTKDLEAFNNFLTACGAGATLVWRAGDYGWRATKGMASLLTP HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH ITLSAAELLTGIRSGKVRQCQDDRGCGWLFVDESRAQNRRWCSMGDCGNRAKAHRHYQRA HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCHHHHHHHHHHH KGHDLKSN CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA