| Definition | Mesorhizobium loti MAFF303099 plasmid pMLb, complete sequence. |
|---|---|
| Accession | NC_002682 |
| Length | 208,315 |
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The map label for this gene is 13488543
Identifier: 13488543
GI number: 13488543
Start: 170916
End: 171326
Strand: Reverse
Name: 13488543
Synonym: mll9711
Alternate gene names: NA
Gene position: 171326-170916 (Counterclockwise)
Preceding gene: 13488545
Following gene: 13488542
Centisome position: 82.24
GC content: 60.34
Gene sequence:
>411_bases GTGGGGACTTCAGCCAAGGAACCAGGCGGACGCCCTTTCACGGTCGTGCGTGCGGAGGAGCGCACGTTTCCGAGCCATCG CTGCCTGGTACCGGCGTCCGAATTCCGGTATCGCAGCCAGGGAAAGAACGACAGCTTTCGCCTTGGAAGCGGTGATTGGT TCTATTTCGTCGGCATCTGGCGGCCGGCGACGCGCGATTGGCCGGAAGCCTACGCAATCCTCACGATCCAGGCCTATGAC GACATTTCCCCCTATCATGACCGTCAGATGGTTGTGCTGCGCCGGGACGAGCGCTCGGTTTGGCTCGACATGACGCATCC TGAACACGAAGTCCTTCGCCCCCTTCCAGGAGCAAGTCTTGCGATTTCGCATCTGCGCCAGGCTCGCAAACAGGCTGAAT TTGCGATCTGA
Upstream 100 bases:
>100_bases GTTCCGGCTATGTTCATTTTACCATGCGCGCAAGAGTTTTCGCTGAACGCCGCGTCATCATAAGGCGCTATGGCGACGAT GTTGAGATGCTTGAGTTGCC
Downstream 100 bases:
>100_bases AGATTGTAGGATCTTTCAATACGAGGCTTAGACCCTGGTGAAATGATATTGCAGGCAAATGGTCCCTGAACGCGGCGCCG ACCCTCGCAAGATCATCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MGTSAKEPGGRPFTVVRAEERTFPSHRCLVPASEFRYRSQGKNDSFRLGSGDWFYFVGIWRPATRDWPEAYAILTIQAYD DISPYHDRQMVVLRRDERSVWLDMTHPEHEVLRPLPGASLAISHLRQARKQAEFAI
Sequences:
>Translated_136_residues MGTSAKEPGGRPFTVVRAEERTFPSHRCLVPASEFRYRSQGKNDSFRLGSGDWFYFVGIWRPATRDWPEAYAILTIQAYD DISPYHDRQMVVLRRDERSVWLDMTHPEHEVLRPLPGASLAISHLRQARKQAEFAI >Mature_135_residues GTSAKEPGGRPFTVVRAEERTFPSHRCLVPASEFRYRSQGKNDSFRLGSGDWFYFVGIWRPATRDWPEAYAILTIQAYDD ISPYHDRQMVVLRRDERSVWLDMTHPEHEVLRPLPGASLAISHLRQARKQAEFAI
Specific function: Unknown
COG id: COG2135
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15761; Mature: 15630
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTSAKEPGGRPFTVVRAEERTFPSHRCLVPASEFRYRSQGKNDSFRLGSGDWFYFVGIW CCCCCCCCCCCEEEEEEECCCCCCCCEEECCHHHHHHHCCCCCCCEEECCCCEEEEEEEE RPATRDWPEAYAILTIQAYDDISPYHDRQMVVLRRDERSVWLDMTHPEHEVLRPLPGASL CCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCEEEEECCCCHHHHHCCCCCHHH AISHLRQARKQAEFAI HHHHHHHHHHHHCCCC >Mature Secondary Structure GTSAKEPGGRPFTVVRAEERTFPSHRCLVPASEFRYRSQGKNDSFRLGSGDWFYFVGIW CCCCCCCCCCEEEEEEECCCCCCCCEEECCHHHHHHHCCCCCCCEEECCCCEEEEEEEE RPATRDWPEAYAILTIQAYDDISPYHDRQMVVLRRDERSVWLDMTHPEHEVLRPLPGASL CCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCEEEEECCCCHHHHHCCCCCHHH AISHLRQARKQAEFAI HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA