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The map label for this gene is rbn [C]

Identifier: 13488528

GI number: 13488528

Start: 153076

End: 154230

Strand: Direct

Name: rbn [C]

Synonym: mlr9690

Alternate gene names: 13488528

Gene position: 153076-154230 (Clockwise)

Preceding gene: 13488527

Following gene: 13488530

Centisome position: 73.48

GC content: 57.4

Gene sequence:

>1155_bases
ATGCCCGAATGCGGACCTCGATTCCCGCCGCCTTTCGGCACCCTCGGATCTACCCAAGCCAAGCGGAACATCCGAAGCGT
CGACGCATTGCTAGTGAGGACATGGAGCTCTGTCGGTTTTTTAGGGACCAACATGCCCCTAGCTTTCAAGGATGTTTGGA
ACGTTGCGCGCGAAGCCGTGGTTGGTTTTGTCGACGACGATGCCCTTAGTCATGGCGCGGCGATGGCCTTCTACGCCACG
ACTTCGCTTGCACCGGTCCTGTTGATCGTGGTCGCGATCGCTGGTTTGGCTTTCGGTCATGACGCTGCGCAGTTGGCTCT
ATCGGCACAGATTTCGGGTCTTATGGGAGCGGGGAGCGCGGGGATCCTCGAAGACATCCTGAAAGGGGCGTCTGCGAAAT
CGTCGGGAACCGTGGCGGCGATCCTAGGCACGGTCACTTTGTTCATAACCGCCTCGGGTGTCTTTGGCGAAATGCAGCAG
TCGCTCAACAAGATATGGAAGGTTGAGCCGAACGGCGGTTCGATTTCGCGCCTTGTTCGGGCCCGCGCAGTAAGTCTGGG
TCTTGTGGCTGCACTCGGTTTCATGCTGCTCGTATCTTTGGTGGCGAGCGCCGCAATCTCGACACTCGGCGACTTCATCA
GCGCTCGATTGCCTTTCGGCACAATCGTTTTGAGTGTCATCAATACCTTTGTTTCCTTTGTTCTGATTTCTGCGATGTTC
GCCGCGATCTATAAAGTGTTGCCCGACCGGACCTTGAAATGGCGCGATGTCGCAATTGGCGCTTTGGTGACCGCTGCCCT
GTTCACGATCGGAAAATCACTAATTGGTTGGTACCTTGGCACAAGCGCCGTTGCATCATCATACGGGGCTGCGGGAGGAC
TGCTCGTTATCCTGCTGTGGGTCTACTATTCGTCGGAAATTTTCCTGCTCGGAGCAGAATTCACCCGCGCCTTTTCCATC
CGACATGGAAGCAGATCCGATCTGGCCAGGCTAGTTCCCCAGCCGTTGCCGGCAGACACGGCGATCCCGGCTCGCAGCGA
GCGAATGGCTCTCGATGATAAAAAGGGCAAGTCGGGCGGGGTTTTGGCTGTAGTCGCCGTGGCCTCCGTGAGTGCGACGA
TAACCGCTATCGTGCTGGGTCCACGCCGCCCTTAG

Upstream 100 bases:

>100_bases
CGGATATTAAATGCGCGGTTCCCGCTTTGGATCCACCTCTCTCTAGTTTAGATCTGGCTAACGATGGTTTTTGACGGGTC
CATATGGGTATCTCGGCGGG

Downstream 100 bases:

>100_bases
CATTTGTTGATGAAAACGCATGTCGACGAAGCCGGTAGGCAGGAGTGTCGGAGACTAGGAACGCTATGAGCATGAACAAT
CACCCAGGGCCCCTGCCTCG

Product: BrkB (serum resistance)-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MPECGPRFPPPFGTLGSTQAKRNIRSVDALLVRTWSSVGFLGTNMPLAFKDVWNVAREAVVGFVDDDALSHGAAMAFYAT
TSLAPVLLIVVAIAGLAFGHDAAQLALSAQISGLMGAGSAGILEDILKGASAKSSGTVAAILGTVTLFITASGVFGEMQQ
SLNKIWKVEPNGGSISRLVRARAVSLGLVAALGFMLLVSLVASAAISTLGDFISARLPFGTIVLSVINTFVSFVLISAMF
AAIYKVLPDRTLKWRDVAIGALVTAALFTIGKSLIGWYLGTSAVASSYGAAGGLLVILLWVYYSSEIFLLGAEFTRAFSI
RHGSRSDLARLVPQPLPADTAIPARSERMALDDKKGKSGGVLAVVAVASVSATITAIVLGPRRP

Sequences:

>Translated_384_residues
MPECGPRFPPPFGTLGSTQAKRNIRSVDALLVRTWSSVGFLGTNMPLAFKDVWNVAREAVVGFVDDDALSHGAAMAFYAT
TSLAPVLLIVVAIAGLAFGHDAAQLALSAQISGLMGAGSAGILEDILKGASAKSSGTVAAILGTVTLFITASGVFGEMQQ
SLNKIWKVEPNGGSISRLVRARAVSLGLVAALGFMLLVSLVASAAISTLGDFISARLPFGTIVLSVINTFVSFVLISAMF
AAIYKVLPDRTLKWRDVAIGALVTAALFTIGKSLIGWYLGTSAVASSYGAAGGLLVILLWVYYSSEIFLLGAEFTRAFSI
RHGSRSDLARLVPQPLPADTAIPARSERMALDDKKGKSGGVLAVVAVASVSATITAIVLGPRRP
>Mature_383_residues
PECGPRFPPPFGTLGSTQAKRNIRSVDALLVRTWSSVGFLGTNMPLAFKDVWNVAREAVVGFVDDDALSHGAAMAFYATT
SLAPVLLIVVAIAGLAFGHDAAQLALSAQISGLMGAGSAGILEDILKGASAKSSGTVAAILGTVTLFITASGVFGEMQQS
LNKIWKVEPNGGSISRLVRARAVSLGLVAALGFMLLVSLVASAAISTLGDFISARLPFGTIVLSVINTFVSFVLISAMFA
AIYKVLPDRTLKWRDVAIGALVTAALFTIGKSLIGWYLGTSAVASSYGAAGGLLVILLWVYYSSEIFLLGAEFTRAFSIR
HGSRSDLARLVPQPLPADTAIPARSERMALDDKKGKSGGVLAVVAVASVSATITAIVLGPRRP

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 39884; Mature: 39753

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPECGPRFPPPFGTLGSTQAKRNIRSVDALLVRTWSSVGFLGTNMPLAFKDVWNVAREAV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
VGFVDDDALSHGAAMAFYATTSLAPVLLIVVAIAGLAFGHDAAQLALSAQISGLMGAGSA
HHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCH
GILEDILKGASAKSSGTVAAILGTVTLFITASGVFGEMQQSLNKIWKVEPNGGSISRLVR
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEECCCCCHHHHHHH
ARAVSLGLVAALGFMLLVSLVASAAISTLGDFISARLPFGTIVLSVINTFVSFVLISAMF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AAIYKVLPDRTLKWRDVAIGALVTAALFTIGKSLIGWYLGTSAVASSYGAAGGLLVILLW
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VYYSSEIFLLGAEFTRAFSIRHGSRSDLARLVPQPLPADTAIPARSERMALDDKKGKSGG
HHHCCCEEEEEHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VLAVVAVASVSATITAIVLGPRRP
EEHHHHHHHHHHEEEEEEECCCCC
>Mature Secondary Structure 
PECGPRFPPPFGTLGSTQAKRNIRSVDALLVRTWSSVGFLGTNMPLAFKDVWNVAREAV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
VGFVDDDALSHGAAMAFYATTSLAPVLLIVVAIAGLAFGHDAAQLALSAQISGLMGAGSA
HHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCH
GILEDILKGASAKSSGTVAAILGTVTLFITASGVFGEMQQSLNKIWKVEPNGGSISRLVR
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEECCCCCHHHHHHH
ARAVSLGLVAALGFMLLVSLVASAAISTLGDFISARLPFGTIVLSVINTFVSFVLISAMF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AAIYKVLPDRTLKWRDVAIGALVTAALFTIGKSLIGWYLGTSAVASSYGAAGGLLVILLW
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VYYSSEIFLLGAEFTRAFSIRHGSRSDLARLVPQPLPADTAIPARSERMALDDKKGKSGG
HHHCCCEEEEEHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VLAVVAVASVSATITAIVLGPRRP
EEHHHHHHHHHHEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]