Click here to switch to the map view.

The map label for this gene is yfkH [H]

Identifier: 13488510

GI number: 13488510

Start: 136047

End: 137117

Strand: Reverse

Name: yfkH [H]

Synonym: mll9669

Alternate gene names: 13488510

Gene position: 137117-136047 (Counterclockwise)

Preceding gene: 13488511

Following gene: 13488506

Centisome position: 65.82

GC content: 59.29

Gene sequence:

>1071_bases
GTGACTTCGAACGCGAAACGGAGTCAGCAGCCACTCCGCAAAGGGGCATCCTTAATCGATGAAGAAGCGGCCAGTCGCGC
TGCTTCAACAACGGAAGAGAGCAAGGCCGCTCTGAGAGCAGAGGAGGGAGACCGCGGACGTGACGCGGCTTGGCCCTCCC
AGATACCAGCGCTTGGGTGGAAAGATATTTTCTGGCGCCTGTGGGAGGAATTCAGCAAGGACCGGGTTCTGCTCGTCGCG
GCTGGCGCCACATTCTACCTGCTCCTGGCACTGTTTCCGGCCTTGGCCGCGTTCATTTCAATTTACGGCTTTGTCGCGGA
TCCAGTTACGGTTGCGGACCATGTCGCATATCTCGGCGGATTGCTTCCGTCAGGGGGGCTGGACCTCATTCGCGGCCAGC
TGCAAGCCTTGGCCAGCCAGAAACCCGGTGCTCTCGGCATAGGCTTCTTCATTGGCCTTGGTATCGCGCTGTGGAGTTCC
AACAGCGGCATGAAAGCCCTCTTTGATGCGATGAACATCGCCTATGAGGAACGCGAAAAACGCAGCATCATCGCGCTCAA
CCTCATGTCGATCCTGTTCACCGTCGGAGCGTTGCTGATCGGCATCCTGCTGCTCCTCACCGTGGGCGTCGTTCCGGCAC
TTTTGCGCTATTTCTATCTTGATGCTTGGACGGAGACGCTTGTCGCGGTGTCCCGGTGGCCGATCCTGGTGGGTGCGATG
CTGACCGGAATATCCCTCCTTTATCGCTTTGGGCCAAGCCGCGAACGAGCCAAGTGGCGCTGGCTGAGTTGGGGCTCCTT
GATTGCGACGGTGGCGTGGATCGCAGCGTCGTGGCTCTTCTCGTTCTATTTGCAGCATTTCGCTAACTACAACGCTACCT
ACGGGTCGCTCGGCGCCGTTGTCGGTTTGATGATGTGGACGTGGATTTCCGTCATCATCCTTATTGCTGGCGCAGCCATC
AATGCCGAGATGGAGCATCAGACAGCCGTAGACTCGACCACAGGCCCGCCCCTGCCCATGGGCAAGCGTGGCGCGGTGGT
GGCCGACACGTTGGGCAAGACCGCGGATTGA

Upstream 100 bases:

>100_bases
AAAGCGCTCGACGGCACCCCAGCACCACGCCAAGGGAGGGACGCGCTGGTCGCACATGCTAGAGTCTTGGTCGAATGTGG
CGTACAGTGAGGCTAAAAGA

Downstream 100 bases:

>100_bases
CTGCCACATTTCACCAACGGTAATAAGTTCCCTTTGGAGCGCTTGGACAGCCAGTCATGTCATTGCCCGCAGGATGCCGG
CCCACCGAGTTGGACGCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MTSNAKRSQQPLRKGASLIDEEAASRAASTTEESKAALRAEEGDRGRDAAWPSQIPALGWKDIFWRLWEEFSKDRVLLVA
AGATFYLLLALFPALAAFISIYGFVADPVTVADHVAYLGGLLPSGGLDLIRGQLQALASQKPGALGIGFFIGLGIALWSS
NSGMKALFDAMNIAYEEREKRSIIALNLMSILFTVGALLIGILLLLTVGVVPALLRYFYLDAWTETLVAVSRWPILVGAM
LTGISLLYRFGPSRERAKWRWLSWGSLIATVAWIAASWLFSFYLQHFANYNATYGSLGAVVGLMMWTWISVIILIAGAAI
NAEMEHQTAVDSTTGPPLPMGKRGAVVADTLGKTAD

Sequences:

>Translated_356_residues
MTSNAKRSQQPLRKGASLIDEEAASRAASTTEESKAALRAEEGDRGRDAAWPSQIPALGWKDIFWRLWEEFSKDRVLLVA
AGATFYLLLALFPALAAFISIYGFVADPVTVADHVAYLGGLLPSGGLDLIRGQLQALASQKPGALGIGFFIGLGIALWSS
NSGMKALFDAMNIAYEEREKRSIIALNLMSILFTVGALLIGILLLLTVGVVPALLRYFYLDAWTETLVAVSRWPILVGAM
LTGISLLYRFGPSRERAKWRWLSWGSLIATVAWIAASWLFSFYLQHFANYNATYGSLGAVVGLMMWTWISVIILIAGAAI
NAEMEHQTAVDSTTGPPLPMGKRGAVVADTLGKTAD
>Mature_355_residues
TSNAKRSQQPLRKGASLIDEEAASRAASTTEESKAALRAEEGDRGRDAAWPSQIPALGWKDIFWRLWEEFSKDRVLLVAA
GATFYLLLALFPALAAFISIYGFVADPVTVADHVAYLGGLLPSGGLDLIRGQLQALASQKPGALGIGFFIGLGIALWSSN
SGMKALFDAMNIAYEEREKRSIIALNLMSILFTVGALLIGILLLLTVGVVPALLRYFYLDAWTETLVAVSRWPILVGAML
TGISLLYRFGPSRERAKWRWLSWGSLIATVAWIAASWLFSFYLQHFANYNATYGSLGAVVGLMMWTWISVIILIAGAAIN
AEMEHQTAVDSTTGPPLPMGKRGAVVADTLGKTAD

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 38575; Mature: 38444

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSNAKRSQQPLRKGASLIDEEAASRAASTTEESKAALRAEEGDRGRDAAWPSQIPALGW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
KDIFWRLWEEFSKDRVLLVAAGATFYLLLALFPALAAFISIYGFVADPVTVADHVAYLGG
HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LLPSGGLDLIRGQLQALASQKPGALGIGFFIGLGIALWSSNSGMKALFDAMNIAYEEREK
CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RSIIALNLMSILFTVGALLIGILLLLTVGVVPALLRYFYLDAWTETLVAVSRWPILVGAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTGISLLYRFGPSRERAKWRWLSWGSLIATVAWIAASWLFSFYLQHFANYNATYGSLGAV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VGLMMWTWISVIILIAGAAINAEMEHQTAVDSTTGPPLPMGKRGAVVADTLGKTAD
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCC
>Mature Secondary Structure 
TSNAKRSQQPLRKGASLIDEEAASRAASTTEESKAALRAEEGDRGRDAAWPSQIPALGW
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
KDIFWRLWEEFSKDRVLLVAAGATFYLLLALFPALAAFISIYGFVADPVTVADHVAYLGG
HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LLPSGGLDLIRGQLQALASQKPGALGIGFFIGLGIALWSSNSGMKALFDAMNIAYEEREK
CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RSIIALNLMSILFTVGALLIGILLLLTVGVVPALLRYFYLDAWTETLVAVSRWPILVGAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTGISLLYRFGPSRERAKWRWLSWGSLIATVAWIAASWLFSFYLQHFANYNATYGSLGAV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VGLMMWTWISVIILIAGAAINAEMEHQTAVDSTTGPPLPMGKRGAVVADTLGKTAD
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]