Definition Mesorhizobium loti MAFF303099 plasmid pMLb, complete sequence.
Accession NC_002682
Length 208,315

Click here to switch to the map view.

The map label for this gene is 13488501

Identifier: 13488501

GI number: 13488501

Start: 128790

End: 129866

Strand: Direct

Name: 13488501

Synonym: mlr9657

Alternate gene names: NA

Gene position: 128790-129866 (Clockwise)

Preceding gene: 13488493

Following gene: 13488504

Centisome position: 61.82

GC content: 58.03

Gene sequence:

>1077_bases
GTGGCCCATGGCTCCCGCGCTATAGTCCGTTGGGGCCTTCTTTCCACGCTACGCACGGCGAGTAACTTCTCGCTCGAACT
TGGCAAGGCCGCCCGCAAAGTAAGCGTGGGGCGGGCTGTGGGCCGCTGGCTTCAGCGGGCGGGTGTCGTGGGAACCTCGA
TCAGCGCATTCCGTTGTGATGCATCAAGTTGCCGTCCTGTCCGGGCAACGGGCAGGGCGTGCGACGACAACGAAAGGATC
ACCACGATGAGTTACAAAAGTCTGGCTACCGCCACCGCGCTAGCGACCCTTGTTGCCTCAGGCGCTTTTGCCGCGAATGT
TGTGACAGCGGCGCCCGCGGACACCAATGCTGCGACAACTGCTGCGGTCGCGCCAAATGGCAGCCTTGTTTCCAAAATTA
TCGGCGCTACCGTTTACAACGGAACGGACGCTAATGCCCAGACGATCGGCAAGGTCAATGACGTCCTGCTTGCGAAGGAC
GGCAAGGCGCAGTCTCTCATTATCGGCGTCGGAGGCTTTCTCGGCATCGGTGAAAAGAATGTCGCTTTCGACTTCAACAA
GGCCCAGTGGGCCGAAAAGGACGGCAAGCGCTGGCTTGTGATCAAGACCACCAAGGAAGATCTCCAGGCCCAGCCGAACT
TCGATACCAAGGCCTATGACCCAACCTTGGCTTCCAACACACCCCCCGCGTCCACGACAGTGGTGACCGACTCAACCACT
ACCGCAGCTGTAGATAAGACGGCTTTGACCGCCGTTCCGATCGACAAGATCCGGGCCGAGGATCTGGTCGGCACGACCGT
CTATGGCGCCAACGACGCCAAGGTTGGAAAGATCGGCGACGTTGTGCTGACGGGTGACAAGAAAGTCGACGCAGTCCTGA
TCGATGTCGGTGGGTTCCTCGGGATAGGCGCCAAGGAGGTGGCCGTTGGCATGGACAACCTCAAGTTCATGACGGACAAG
TCAGGAAATAAGTATCTATATACAAACTTTACAAAAGAGCAGTTTAACGCGCAGCCGGCCTATGAAAAAGGCAGCTACGC
TAACGCGCGTGACAAACAACGCATGATCGCGAACTAG

Upstream 100 bases:

>100_bases
GTGAAAGACAACCGGCGAGGAACGTTCCCGCTACGCGCCTGGCAACTGGCTCGAGTCCCGAGGGGACTTGCTGACACCCC
CCGGCCAGCCCTCGGGCGGG

Downstream 100 bases:

>100_bases
AGGGGCTTGGCCTGTCCGTTGAATGGACGGACGCGCTCTCCGCGACCTGGTTCCTATCGACCGGGTCGCGGGCGATTCGT
TGGGCGGGTCCAGCGGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: PRC-Barrel Domain Protein; PRC-Barrel; PRC Protein

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MAHGSRAIVRWGLLSTLRTASNFSLELGKAARKVSVGRAVGRWLQRAGVVGTSISAFRCDASSCRPVRATGRACDDNERI
TTMSYKSLATATALATLVASGAFAANVVTAAPADTNAATTAAVAPNGSLVSKIIGATVYNGTDANAQTIGKVNDVLLAKD
GKAQSLIIGVGGFLGIGEKNVAFDFNKAQWAEKDGKRWLVIKTTKEDLQAQPNFDTKAYDPTLASNTPPASTTVVTDSTT
TAAVDKTALTAVPIDKIRAEDLVGTTVYGANDAKVGKIGDVVLTGDKKVDAVLIDVGGFLGIGAKEVAVGMDNLKFMTDK
SGNKYLYTNFTKEQFNAQPAYEKGSYANARDKQRMIAN

Sequences:

>Translated_358_residues
MAHGSRAIVRWGLLSTLRTASNFSLELGKAARKVSVGRAVGRWLQRAGVVGTSISAFRCDASSCRPVRATGRACDDNERI
TTMSYKSLATATALATLVASGAFAANVVTAAPADTNAATTAAVAPNGSLVSKIIGATVYNGTDANAQTIGKVNDVLLAKD
GKAQSLIIGVGGFLGIGEKNVAFDFNKAQWAEKDGKRWLVIKTTKEDLQAQPNFDTKAYDPTLASNTPPASTTVVTDSTT
TAAVDKTALTAVPIDKIRAEDLVGTTVYGANDAKVGKIGDVVLTGDKKVDAVLIDVGGFLGIGAKEVAVGMDNLKFMTDK
SGNKYLYTNFTKEQFNAQPAYEKGSYANARDKQRMIAN
>Mature_357_residues
AHGSRAIVRWGLLSTLRTASNFSLELGKAARKVSVGRAVGRWLQRAGVVGTSISAFRCDASSCRPVRATGRACDDNERIT
TMSYKSLATATALATLVASGAFAANVVTAAPADTNAATTAAVAPNGSLVSKIIGATVYNGTDANAQTIGKVNDVLLAKDG
KAQSLIIGVGGFLGIGEKNVAFDFNKAQWAEKDGKRWLVIKTTKEDLQAQPNFDTKAYDPTLASNTPPASTTVVTDSTTT
AAVDKTALTAVPIDKIRAEDLVGTTVYGANDAKVGKIGDVVLTGDKKVDAVLIDVGGFLGIGAKEVAVGMDNLKFMTDKS
GNKYLYTNFTKEQFNAQPAYEKGSYANARDKQRMIAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37512; Mature: 37381

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHGSRAIVRWGLLSTLRTASNFSLELGKAARKVSVGRAVGRWLQRAGVVGTSISAFRCD
CCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
ASSCRPVRATGRACDDNERITTMSYKSLATATALATLVASGAFAANVVTAAPADTNAATT
CCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCEE
AAVAPNGSLVSKIIGATVYNGTDANAQTIGKVNDVLLAKDGKAQSLIIGVGGFLGIGEKN
EEECCCCHHHHHHHHHEEECCCCCCHHHHCCCCEEEEECCCCCCEEEEECCCCCCCCCCC
VAFDFNKAQWAEKDGKRWLVIKTTKEDLQAQPNFDTKAYDPTLASNTPPASTTVVTDSTT
EEEECCHHHHHHCCCCEEEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
TAAVDKTALTAVPIDKIRAEDLVGTTVYGANDAKVGKIGDVVLTGDKKVDAVLIDVGGFL
CHHHCCCEEEECCHHHHHHHHHCCEEEECCCCCCCCCCCCEEEECCCCEEEEEEECCCCC
GIGAKEVAVGMDNLKFMTDKSGNKYLYTNFTKEQFNAQPAYEKGSYANARDKQRMIAN
CCCHHHEEECCCCEEEEECCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure 
AHGSRAIVRWGLLSTLRTASNFSLELGKAARKVSVGRAVGRWLQRAGVVGTSISAFRCD
CCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
ASSCRPVRATGRACDDNERITTMSYKSLATATALATLVASGAFAANVVTAAPADTNAATT
CCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCEE
AAVAPNGSLVSKIIGATVYNGTDANAQTIGKVNDVLLAKDGKAQSLIIGVGGFLGIGEKN
EEECCCCHHHHHHHHHEEECCCCCCHHHHCCCCEEEEECCCCCCEEEEECCCCCCCCCCC
VAFDFNKAQWAEKDGKRWLVIKTTKEDLQAQPNFDTKAYDPTLASNTPPASTTVVTDSTT
EEEECCHHHHHHCCCCEEEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
TAAVDKTALTAVPIDKIRAEDLVGTTVYGANDAKVGKIGDVVLTGDKKVDAVLIDVGGFL
CHHHCCCEEEECCHHHHHHHHHCCEEEECCCCCCCCCCCCEEEECCCCEEEEEEECCCCC
GIGAKEVAVGMDNLKFMTDKSGNKYLYTNFTKEQFNAQPAYEKGSYANARDKQRMIAN
CCCHHHEEECCCCEEEEECCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA