| Definition | Mesorhizobium loti MAFF303099 plasmid pMLb, complete sequence. |
|---|---|
| Accession | NC_002682 |
| Length | 208,315 |
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The map label for this gene is 13488501
Identifier: 13488501
GI number: 13488501
Start: 128790
End: 129866
Strand: Direct
Name: 13488501
Synonym: mlr9657
Alternate gene names: NA
Gene position: 128790-129866 (Clockwise)
Preceding gene: 13488493
Following gene: 13488504
Centisome position: 61.82
GC content: 58.03
Gene sequence:
>1077_bases GTGGCCCATGGCTCCCGCGCTATAGTCCGTTGGGGCCTTCTTTCCACGCTACGCACGGCGAGTAACTTCTCGCTCGAACT TGGCAAGGCCGCCCGCAAAGTAAGCGTGGGGCGGGCTGTGGGCCGCTGGCTTCAGCGGGCGGGTGTCGTGGGAACCTCGA TCAGCGCATTCCGTTGTGATGCATCAAGTTGCCGTCCTGTCCGGGCAACGGGCAGGGCGTGCGACGACAACGAAAGGATC ACCACGATGAGTTACAAAAGTCTGGCTACCGCCACCGCGCTAGCGACCCTTGTTGCCTCAGGCGCTTTTGCCGCGAATGT TGTGACAGCGGCGCCCGCGGACACCAATGCTGCGACAACTGCTGCGGTCGCGCCAAATGGCAGCCTTGTTTCCAAAATTA TCGGCGCTACCGTTTACAACGGAACGGACGCTAATGCCCAGACGATCGGCAAGGTCAATGACGTCCTGCTTGCGAAGGAC GGCAAGGCGCAGTCTCTCATTATCGGCGTCGGAGGCTTTCTCGGCATCGGTGAAAAGAATGTCGCTTTCGACTTCAACAA GGCCCAGTGGGCCGAAAAGGACGGCAAGCGCTGGCTTGTGATCAAGACCACCAAGGAAGATCTCCAGGCCCAGCCGAACT TCGATACCAAGGCCTATGACCCAACCTTGGCTTCCAACACACCCCCCGCGTCCACGACAGTGGTGACCGACTCAACCACT ACCGCAGCTGTAGATAAGACGGCTTTGACCGCCGTTCCGATCGACAAGATCCGGGCCGAGGATCTGGTCGGCACGACCGT CTATGGCGCCAACGACGCCAAGGTTGGAAAGATCGGCGACGTTGTGCTGACGGGTGACAAGAAAGTCGACGCAGTCCTGA TCGATGTCGGTGGGTTCCTCGGGATAGGCGCCAAGGAGGTGGCCGTTGGCATGGACAACCTCAAGTTCATGACGGACAAG TCAGGAAATAAGTATCTATATACAAACTTTACAAAAGAGCAGTTTAACGCGCAGCCGGCCTATGAAAAAGGCAGCTACGC TAACGCGCGTGACAAACAACGCATGATCGCGAACTAG
Upstream 100 bases:
>100_bases GTGAAAGACAACCGGCGAGGAACGTTCCCGCTACGCGCCTGGCAACTGGCTCGAGTCCCGAGGGGACTTGCTGACACCCC CCGGCCAGCCCTCGGGCGGG
Downstream 100 bases:
>100_bases AGGGGCTTGGCCTGTCCGTTGAATGGACGGACGCGCTCTCCGCGACCTGGTTCCTATCGACCGGGTCGCGGGCGATTCGT TGGGCGGGTCCAGCGGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: PRC-Barrel Domain Protein; PRC-Barrel; PRC Protein
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MAHGSRAIVRWGLLSTLRTASNFSLELGKAARKVSVGRAVGRWLQRAGVVGTSISAFRCDASSCRPVRATGRACDDNERI TTMSYKSLATATALATLVASGAFAANVVTAAPADTNAATTAAVAPNGSLVSKIIGATVYNGTDANAQTIGKVNDVLLAKD GKAQSLIIGVGGFLGIGEKNVAFDFNKAQWAEKDGKRWLVIKTTKEDLQAQPNFDTKAYDPTLASNTPPASTTVVTDSTT TAAVDKTALTAVPIDKIRAEDLVGTTVYGANDAKVGKIGDVVLTGDKKVDAVLIDVGGFLGIGAKEVAVGMDNLKFMTDK SGNKYLYTNFTKEQFNAQPAYEKGSYANARDKQRMIAN
Sequences:
>Translated_358_residues MAHGSRAIVRWGLLSTLRTASNFSLELGKAARKVSVGRAVGRWLQRAGVVGTSISAFRCDASSCRPVRATGRACDDNERI TTMSYKSLATATALATLVASGAFAANVVTAAPADTNAATTAAVAPNGSLVSKIIGATVYNGTDANAQTIGKVNDVLLAKD GKAQSLIIGVGGFLGIGEKNVAFDFNKAQWAEKDGKRWLVIKTTKEDLQAQPNFDTKAYDPTLASNTPPASTTVVTDSTT TAAVDKTALTAVPIDKIRAEDLVGTTVYGANDAKVGKIGDVVLTGDKKVDAVLIDVGGFLGIGAKEVAVGMDNLKFMTDK SGNKYLYTNFTKEQFNAQPAYEKGSYANARDKQRMIAN >Mature_357_residues AHGSRAIVRWGLLSTLRTASNFSLELGKAARKVSVGRAVGRWLQRAGVVGTSISAFRCDASSCRPVRATGRACDDNERIT TMSYKSLATATALATLVASGAFAANVVTAAPADTNAATTAAVAPNGSLVSKIIGATVYNGTDANAQTIGKVNDVLLAKDG KAQSLIIGVGGFLGIGEKNVAFDFNKAQWAEKDGKRWLVIKTTKEDLQAQPNFDTKAYDPTLASNTPPASTTVVTDSTTT AAVDKTALTAVPIDKIRAEDLVGTTVYGANDAKVGKIGDVVLTGDKKVDAVLIDVGGFLGIGAKEVAVGMDNLKFMTDKS GNKYLYTNFTKEQFNAQPAYEKGSYANARDKQRMIAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37512; Mature: 37381
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHGSRAIVRWGLLSTLRTASNFSLELGKAARKVSVGRAVGRWLQRAGVVGTSISAFRCD CCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC ASSCRPVRATGRACDDNERITTMSYKSLATATALATLVASGAFAANVVTAAPADTNAATT CCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCEE AAVAPNGSLVSKIIGATVYNGTDANAQTIGKVNDVLLAKDGKAQSLIIGVGGFLGIGEKN EEECCCCHHHHHHHHHEEECCCCCCHHHHCCCCEEEEECCCCCCEEEEECCCCCCCCCCC VAFDFNKAQWAEKDGKRWLVIKTTKEDLQAQPNFDTKAYDPTLASNTPPASTTVVTDSTT EEEECCHHHHHHCCCCEEEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC TAAVDKTALTAVPIDKIRAEDLVGTTVYGANDAKVGKIGDVVLTGDKKVDAVLIDVGGFL CHHHCCCEEEECCHHHHHHHHHCCEEEECCCCCCCCCCCCEEEECCCCEEEEEEECCCCC GIGAKEVAVGMDNLKFMTDKSGNKYLYTNFTKEQFNAQPAYEKGSYANARDKQRMIAN CCCHHHEEECCCCEEEEECCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHCCC >Mature Secondary Structure AHGSRAIVRWGLLSTLRTASNFSLELGKAARKVSVGRAVGRWLQRAGVVGTSISAFRCD CCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC ASSCRPVRATGRACDDNERITTMSYKSLATATALATLVASGAFAANVVTAAPADTNAATT CCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCEE AAVAPNGSLVSKIIGATVYNGTDANAQTIGKVNDVLLAKDGKAQSLIIGVGGFLGIGEKN EEECCCCHHHHHHHHHEEECCCCCCHHHHCCCCEEEEECCCCCCEEEEECCCCCCCCCCC VAFDFNKAQWAEKDGKRWLVIKTTKEDLQAQPNFDTKAYDPTLASNTPPASTTVVTDSTT EEEECCHHHHHHCCCCEEEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC TAAVDKTALTAVPIDKIRAEDLVGTTVYGANDAKVGKIGDVVLTGDKKVDAVLIDVGGFL CHHHCCCEEEECCHHHHHHHHHCCEEEECCCCCCCCCCCCEEEECCCCEEEEEEECCCCC GIGAKEVAVGMDNLKFMTDKSGNKYLYTNFTKEQFNAQPAYEKGSYANARDKQRMIAN CCCHHHEEECCCCEEEEECCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA