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The map label for this gene is 13488496

Identifier: 13488496

GI number: 13488496

Start: 122335

End: 123540

Strand: Reverse

Name: 13488496

Synonym: mll9652

Alternate gene names: NA

Gene position: 123540-122335 (Counterclockwise)

Preceding gene: 13488497

Following gene: 13488495

Centisome position: 59.3

GC content: 61.28

Gene sequence:

>1206_bases
ATGGAGAGTGGGTTTGCGACGACGCCTTTTGGGCGGCGGCCGATGACGCTTGCCTTGGTGAAGGCCAATGCCGCGTCGCG
GCAGATTCCGAAAGGGGCCGCCGTTGAGAAATGGCAGGTCTACCGGTGGCTATGCGAGGGCAAGTCGATCGTCGGCGTTG
GCGATCGTGCCCTGGCGGTGCTGAGCGGGCTGTTGACGTTTTATCCTGACGACCAGATCAGCGAGGAAAACGGCTTGATG
GTCTTCCCGTCGAACGCACAGCTGTCTTTGCGGGCGCACGGCATGGCCGATTCGACGCTGAGAAGGAACCTGGCCGAGCT
GGTGAGTTGCGGCCTGATCATTCGCCGCGATAGTCCGAACGGCAAAAGATTCGCTCGTAAGGGGCAGGGTGGTGCTGTCA
TGGAGGTCTTCGGGTTCTCGTTGGCGCCTCTGCTGGCACGGGCGGCGGAGTTTCAGCGCGCCGCCGAGCAGGTCCGCGCC
GAGTGCCAGGCGCTGAAATTGATGCGGGAGCGCATCACGCTGCATCGCAGGGACATTCAGAAGCTGGTCGAGGCGGCGAT
CGAGGAAGGGGTTCCGGGCGACTGGGGCGGCGTCTGGAGGCGGTTTCGGTCCATCGTGGATGCAATTCCGCGCCGGGCGG
GGCTGTCACAGCTTGAAGGGATCGTTGCCGAGCTGGTCGTGCTCCACGATGAAGTGGATAGGATGCTGGAAAGCTTCACA
AGTTCCACGAATCCTAGCGGCAATGAGTCCCAAAATGAGCGGCAGCAATCTGATTCAAACACAGACTCCATTTTTGTATT
TGAACCGGCTTTCGAAAAAAGCAGGGCGGCCGTTGAGCCAAGACCGGCACCGGACGAGCGGTTGAAAAGCTATCCGATTG
GACTGGTGCTGAAGGCCTGCCCCGAGTTTGCGGGCTATGCTGTCAACGGGATCGCCAGCTGGCGCGATTTGATGCTCACC
GCGGCCCAGGTGCGCGGCTACCTTGGGGTTTCACCGTCGGCCTATGAGGAGGCTTGCCATGTGATGGGTCAGGAAGTCGC
CGCGATTGTGATTGCGTGTATTCTGCAACGGGCACAGCACATCAATTCGGCCGGTGGCTATCTGCGCGTGCTGACGGAAA
AGGCGAGGGCAGGGGAGTTCTCGGTCGGACCGATGCTGATGGCCGCGCTCAAGGCCAATGGCCCGGCAACGAGGATGACG
GGATGA

Upstream 100 bases:

>100_bases
CTGTAGCAAGCTGAGAATCGCACTTCCCCGAATCACTGTCAAGAGTCGTGGCGCCATTTCGGCGAGCAGGTTTCTTTTGC
CTTCGTGAAAGGTGAGGGAA

Downstream 100 bases:

>100_bases
TTGAGGTACAGGTTCGTGGGGCAGGTTGCTCGGCGCTCTAGGTGACGGCATGCGGCCACCTACCGGCGGTGGGCTCCCGG
GCTTGAAAGCTGTTCAGGAA

Product: replication initiation protein RepC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MESGFATTPFGRRPMTLALVKANAASRQIPKGAAVEKWQVYRWLCEGKSIVGVGDRALAVLSGLLTFYPDDQISEENGLM
VFPSNAQLSLRAHGMADSTLRRNLAELVSCGLIIRRDSPNGKRFARKGQGGAVMEVFGFSLAPLLARAAEFQRAAEQVRA
ECQALKLMRERITLHRRDIQKLVEAAIEEGVPGDWGGVWRRFRSIVDAIPRRAGLSQLEGIVAELVVLHDEVDRMLESFT
SSTNPSGNESQNERQQSDSNTDSIFVFEPAFEKSRAAVEPRPAPDERLKSYPIGLVLKACPEFAGYAVNGIASWRDLMLT
AAQVRGYLGVSPSAYEEACHVMGQEVAAIVIACILQRAQHINSAGGYLRVLTEKARAGEFSVGPMLMAALKANGPATRMT
G

Sequences:

>Translated_401_residues
MESGFATTPFGRRPMTLALVKANAASRQIPKGAAVEKWQVYRWLCEGKSIVGVGDRALAVLSGLLTFYPDDQISEENGLM
VFPSNAQLSLRAHGMADSTLRRNLAELVSCGLIIRRDSPNGKRFARKGQGGAVMEVFGFSLAPLLARAAEFQRAAEQVRA
ECQALKLMRERITLHRRDIQKLVEAAIEEGVPGDWGGVWRRFRSIVDAIPRRAGLSQLEGIVAELVVLHDEVDRMLESFT
SSTNPSGNESQNERQQSDSNTDSIFVFEPAFEKSRAAVEPRPAPDERLKSYPIGLVLKACPEFAGYAVNGIASWRDLMLT
AAQVRGYLGVSPSAYEEACHVMGQEVAAIVIACILQRAQHINSAGGYLRVLTEKARAGEFSVGPMLMAALKANGPATRMT
G
>Mature_401_residues
MESGFATTPFGRRPMTLALVKANAASRQIPKGAAVEKWQVYRWLCEGKSIVGVGDRALAVLSGLLTFYPDDQISEENGLM
VFPSNAQLSLRAHGMADSTLRRNLAELVSCGLIIRRDSPNGKRFARKGQGGAVMEVFGFSLAPLLARAAEFQRAAEQVRA
ECQALKLMRERITLHRRDIQKLVEAAIEEGVPGDWGGVWRRFRSIVDAIPRRAGLSQLEGIVAELVVLHDEVDRMLESFT
SSTNPSGNESQNERQQSDSNTDSIFVFEPAFEKSRAAVEPRPAPDERLKSYPIGLVLKACPEFAGYAVNGIASWRDLMLT
AAQVRGYLGVSPSAYEEACHVMGQEVAAIVIACILQRAQHINSAGGYLRVLTEKARAGEFSVGPMLMAALKANGPATRMT
G

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.rhizogenes possible replication protein C (repC) [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005090
- InterPro:   IPR021760
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03428 RP-C; PF11800 RP-C_C [H]

EC number: NA

Molecular weight: Translated: 43704; Mature: 43704

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESGFATTPFGRRPMTLALVKANAASRQIPKGAAVEKWQVYRWLCEGKSIVGVGDRALAV
CCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCHHHHHHHHHHHCCCCEEECCHHHHHH
LSGLLTFYPDDQISEENGLMVFPSNAQLSLRAHGMADSTLRRNLAELVSCGLIIRRDSPN
HHHHHHHCCCCCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEECCCC
GKRFARKGQGGAVMEVFGFSLAPLLARAAEFQRAAEQVRAECQALKLMRERITLHRRDIQ
CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLVEAAIEEGVPGDWGGVWRRFRSIVDAIPRRAGLSQLEGIVAELVVLHDEVDRMLESFT
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SSTNPSGNESQNERQQSDSNTDSIFVFEPAFEKSRAAVEPRPAPDERLKSYPIGLVLKAC
CCCCCCCCCCHHHHHHCCCCCCEEEEECCCHHCCCCCCCCCCCCHHHHHHCCHHHHHHHH
PEFAGYAVNGIASWRDLMLTAAQVRGYLGVSPSAYEEACHVMGQEVAAIVIACILQRAQH
HHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INSAGGYLRVLTEKARAGEFSVGPMLMAALKANGPATRMTG
CCCCCCEEHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MESGFATTPFGRRPMTLALVKANAASRQIPKGAAVEKWQVYRWLCEGKSIVGVGDRALAV
CCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCHHHHHHHHHHHCCCCEEECCHHHHHH
LSGLLTFYPDDQISEENGLMVFPSNAQLSLRAHGMADSTLRRNLAELVSCGLIIRRDSPN
HHHHHHHCCCCCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEECCCC
GKRFARKGQGGAVMEVFGFSLAPLLARAAEFQRAAEQVRAECQALKLMRERITLHRRDIQ
CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLVEAAIEEGVPGDWGGVWRRFRSIVDAIPRRAGLSQLEGIVAELVVLHDEVDRMLESFT
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SSTNPSGNESQNERQQSDSNTDSIFVFEPAFEKSRAAVEPRPAPDERLKSYPIGLVLKAC
CCCCCCCCCCHHHHHHCCCCCCEEEEECCCHHCCCCCCCCCCCCHHHHHHCCHHHHHHHH
PEFAGYAVNGIASWRDLMLTAAQVRGYLGVSPSAYEEACHVMGQEVAAIVIACILQRAQH
HHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INSAGGYLRVLTEKARAGEFSVGPMLMAALKANGPATRMTG
CCCCCCEEHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]