| Definition | Mesorhizobium loti MAFF303099 plasmid pMLb, complete sequence. |
|---|---|
| Accession | NC_002682 |
| Length | 208,315 |
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The map label for this gene is 13488494
Identifier: 13488494
GI number: 13488494
Start: 121282
End: 121800
Strand: Reverse
Name: 13488494
Synonym: mll9650
Alternate gene names: NA
Gene position: 121800-121282 (Counterclockwise)
Preceding gene: 13488495
Following gene: 13488492
Centisome position: 58.47
GC content: 60.5
Gene sequence:
>519_bases GTGAGGTTCGCCGGAACCTGTTACAGGGCACACGATCCACGCTGGGCATTCAAGCCGACTTCCGGTGATGGAGCGGCGAT CAGAGGCGCACGGTTCAACCCCAAAGGCGTGCCGGCGCTCTATCTGGCGCTGACAATCATGACAGCAATCAAGGAAGCCA ACCAGGGCTTTGCGCACCGGATCGATCCCTGTGTCCTTTGCTCCTATGAGGTCGACTGCGACGACATCGTGGATCTGACG ACGGAAGAGGCGAGGGGAGAATTCGCCATAGCGCTCAAGGACATGGCCTGCGCCTGGGCGACGGCCATGTCCGACGCAGA GCGCCCGGCGTCCGGGTCCATCTACGACCGGCTGCGGTCTCGCGATATTGCCGGAATTGTGGTCCCAAGCTTCGCGCCAA GTGCCCATGATGAGGATCGTAACCTTGTCCTTTGGGACTGGGGTCCGGACCTTCCGCATAAAGTAACTGTCTTCGATCCG AGCGGCCGGTTGCCGAAGGACCAGTTGTCTTGGTCATAG
Upstream 100 bases:
>100_bases TTCCGGCATTTGGCGGACGCACTGCCGAAGCGCTGGTGAAGGATGGCAAGGCCGCCGCGGTCCGTGATTATCTAGATCAC ATGGCAGTCGGTGGTTTTGC
Downstream 100 bases:
>100_bases TGGGCTCGTGGAAGGGCAGGGGAGGGGGCTTGTCAGGGCCTACAAACCGCTTGCCTTGGTGAGGTTGACTCTGAACCGGT CGCGCCGGCGCTGATAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: RES Domain Protein; RES Domain Superfamily
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MRFAGTCYRAHDPRWAFKPTSGDGAAIRGARFNPKGVPALYLALTIMTAIKEANQGFAHRIDPCVLCSYEVDCDDIVDLT TEEARGEFAIALKDMACAWATAMSDAERPASGSIYDRLRSRDIAGIVVPSFAPSAHDEDRNLVLWDWGPDLPHKVTVFDP SGRLPKDQLSWS
Sequences:
>Translated_172_residues MRFAGTCYRAHDPRWAFKPTSGDGAAIRGARFNPKGVPALYLALTIMTAIKEANQGFAHRIDPCVLCSYEVDCDDIVDLT TEEARGEFAIALKDMACAWATAMSDAERPASGSIYDRLRSRDIAGIVVPSFAPSAHDEDRNLVLWDWGPDLPHKVTVFDP SGRLPKDQLSWS >Mature_172_residues MRFAGTCYRAHDPRWAFKPTSGDGAAIRGARFNPKGVPALYLALTIMTAIKEANQGFAHRIDPCVLCSYEVDCDDIVDLT TEEARGEFAIALKDMACAWATAMSDAERPASGSIYDRLRSRDIAGIVVPSFAPSAHDEDRNLVLWDWGPDLPHKVTVFDP SGRLPKDQLSWS
Specific function: Unknown
COG id: COG5654
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18943; Mature: 18943
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFAGTCYRAHDPRWAFKPTSGDGAAIRGARFNPKGVPALYLALTIMTAIKEANQGFAHR CCCCCCEEECCCCCEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHC IDPCVLCSYEVDCDDIVDLTTEEARGEFAIALKDMACAWATAMSDAERPASGSIYDRLRS CCEEEEEEEECCHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHC RDIAGIVVPSFAPSAHDEDRNLVLWDWGPDLPHKVTVFDPSGRLPKDQLSWS CCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MRFAGTCYRAHDPRWAFKPTSGDGAAIRGARFNPKGVPALYLALTIMTAIKEANQGFAHR CCCCCCEEECCCCCEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHC IDPCVLCSYEVDCDDIVDLTTEEARGEFAIALKDMACAWATAMSDAERPASGSIYDRLRS CCEEEEEEEECCHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHC RDIAGIVVPSFAPSAHDEDRNLVLWDWGPDLPHKVTVFDPSGRLPKDQLSWS CCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA