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The map label for this gene is ycgB [H]

Identifier: 13488480

GI number: 13488480

Start: 104244

End: 105788

Strand: Reverse

Name: ycgB [H]

Synonym: mll9636

Alternate gene names: 13488480

Gene position: 105788-104244 (Counterclockwise)

Preceding gene: 13488481

Following gene: 13488478

Centisome position: 50.78

GC content: 58.9

Gene sequence:

>1545_bases
ATGGTCAGTCAGGCGCGCAAGTCCGAACTGCTGTTTTCCGGGTCGGACTGGAATTTTGCGAAACTGGCGCGAGTCTACGA
CGAGATCGAGGCGCTGGGCCTCGAAAAGCTTGGTCTCGACATCTATCCGGTTCAGATGGAGGTCATCTCTTCCGAGCAGA
TGCTCGACGCCTATTCATCGGTGGGCATGCCGCTGATGTATCGGCATTGGTCGTTCGGCAAACGTTTCCTCTACGACGAA
CTTCTCTACCGCAAGGGCGCTCGCGGCTTGGCCCACGAACTGGTCATCAATTCCAGTCCCTGCATCGTCTACTTGATGGA
AGAGAACACCATGGCTCTGCAGGCCCTGGTGATCGCGCACGCAGCGCTGGGCCACAACCATTTCTTCAAGAACAATCATC
TCTTCCGCCAATGGACGGATGCTGGCGGCATCCTGAGCTATCTCGATTTTGCCAAGAGCTACATAGCCCGATGTGAGGAA
CGGCACGGCCTGACCGCAGTGGAGGCGATTTTGGATTCCGCCCACGCGCTGATGGAGCAAGGCGTCTTCCGTTACCGGCG
GCCGCCGAAGCTGTCATCGGAACAGCAGCGCGAAGGGCTGCGCGAGCGCCTCGAATACGAGGAGCGTTCCTTCAACGATC
TCTTGCGAACGCTGCCGCCCTCGCCGGGAAAAAGCAAGCCGGAAGCCACCGACGAAATCCTTGCAGAGCGGAAGAAATCG
CTCAAACTTCCCGAGGAAAACCTGCTCTATTTCCTCGAGAAGAACAGCCTCGTTCTTGAGCCCTGGCAGCGCGAGATAAT
CCGGATCGTTCGCATCATTGCGCAGTATTTTTATCCGCAGCAGCAAACCCAGGTGATGAACGAAGGCTGCGCCACTTTCG
TGCATTACACGCTCATGAACACGCTTTTCGACCGTTGCCGCATCAGCGAAGGCGCCATGCTCGAGATCTTGCGCAACCAC
TCGAACGCCGTCTTCCAGCCGGCCTATGACGACCCGCGCTATTCCCGCATCAATCCCTATGCGCTGGGTCTGGACATGAT
GCAGGATATCCAGCGCATCTCCACCGCGCCGACCGCAGAGGACCGCGACTGGTTCCCAGACATAGCCGGCCGCGGCGACT
GGCGCGATACTTTGCTCGATGCCTGGGCCAACCACCGCGACGAATCCTTCGTCCGCCAATATCTGAGCCCGACGCTCATC
CGGAAGTGGCGGCTATTCATGCTGGCCGACAGCGCCGACGAGCCGCACTACGAAGTGGCCTCGATCCACAACGAGCGTGG
CTACGCCAAGATACGGTCAGCGCTCGCTCAAAGCTACGACGTGGGGGCGAGCCGGCCCGACATCCAAGTGATTGACGTCG
ATCTCCTGGGCGATCGGCGTCTGAGGCTTCAGCACACGGTAAAGAATGGCATCATGCTCGAGGGCGCAAGCCGCGACGCG
ACCTTGCGCCATATCCGAAACCTTTGGGGCTACGAGGTCAGCATGGTGGCACTGGATGCTGAAACCGGTGCGATGCTCAG
CGAACGCTCGACAAAGGAAATTTGA

Upstream 100 bases:

>100_bases
GATGAGGCGCATTGCCGCCCCGGCCGACATTTATCCGGTTTTCCGCCAGCTCTTCGCCAGGCAGCCTGATCTACGCAAGA
GCGCGTGAGGGACTTCGGAA

Downstream 100 bases:

>100_bases
GATCAGAGGCCGCCACTCGCCGGCCGGCCATCCCCTGAACATCCGAACAGACTTATGTGACGACGAAGACTTTTCTGCAG
CAGTTCGGGGCTCGACACGC

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MVSQARKSELLFSGSDWNFAKLARVYDEIEALGLEKLGLDIYPVQMEVISSEQMLDAYSSVGMPLMYRHWSFGKRFLYDE
LLYRKGARGLAHELVINSSPCIVYLMEENTMALQALVIAHAALGHNHFFKNNHLFRQWTDAGGILSYLDFAKSYIARCEE
RHGLTAVEAILDSAHALMEQGVFRYRRPPKLSSEQQREGLRERLEYEERSFNDLLRTLPPSPGKSKPEATDEILAERKKS
LKLPEENLLYFLEKNSLVLEPWQREIIRIVRIIAQYFYPQQQTQVMNEGCATFVHYTLMNTLFDRCRISEGAMLEILRNH
SNAVFQPAYDDPRYSRINPYALGLDMMQDIQRISTAPTAEDRDWFPDIAGRGDWRDTLLDAWANHRDESFVRQYLSPTLI
RKWRLFMLADSADEPHYEVASIHNERGYAKIRSALAQSYDVGASRPDIQVIDVDLLGDRRLRLQHTVKNGIMLEGASRDA
TLRHIRNLWGYEVSMVALDAETGAMLSERSTKEI

Sequences:

>Translated_514_residues
MVSQARKSELLFSGSDWNFAKLARVYDEIEALGLEKLGLDIYPVQMEVISSEQMLDAYSSVGMPLMYRHWSFGKRFLYDE
LLYRKGARGLAHELVINSSPCIVYLMEENTMALQALVIAHAALGHNHFFKNNHLFRQWTDAGGILSYLDFAKSYIARCEE
RHGLTAVEAILDSAHALMEQGVFRYRRPPKLSSEQQREGLRERLEYEERSFNDLLRTLPPSPGKSKPEATDEILAERKKS
LKLPEENLLYFLEKNSLVLEPWQREIIRIVRIIAQYFYPQQQTQVMNEGCATFVHYTLMNTLFDRCRISEGAMLEILRNH
SNAVFQPAYDDPRYSRINPYALGLDMMQDIQRISTAPTAEDRDWFPDIAGRGDWRDTLLDAWANHRDESFVRQYLSPTLI
RKWRLFMLADSADEPHYEVASIHNERGYAKIRSALAQSYDVGASRPDIQVIDVDLLGDRRLRLQHTVKNGIMLEGASRDA
TLRHIRNLWGYEVSMVALDAETGAMLSERSTKEI
>Mature_514_residues
MVSQARKSELLFSGSDWNFAKLARVYDEIEALGLEKLGLDIYPVQMEVISSEQMLDAYSSVGMPLMYRHWSFGKRFLYDE
LLYRKGARGLAHELVINSSPCIVYLMEENTMALQALVIAHAALGHNHFFKNNHLFRQWTDAGGILSYLDFAKSYIARCEE
RHGLTAVEAILDSAHALMEQGVFRYRRPPKLSSEQQREGLRERLEYEERSFNDLLRTLPPSPGKSKPEATDEILAERKKS
LKLPEENLLYFLEKNSLVLEPWQREIIRIVRIIAQYFYPQQQTQVMNEGCATFVHYTLMNTLFDRCRISEGAMLEILRNH
SNAVFQPAYDDPRYSRINPYALGLDMMQDIQRISTAPTAEDRDWFPDIAGRGDWRDTLLDAWANHRDESFVRQYLSPTLI
RKWRLFMLADSADEPHYEVASIHNERGYAKIRSALAQSYDVGASRPDIQVIDVDLLGDRRLRLQHTVKNGIMLEGASRDA
TLRHIRNLWGYEVSMVALDAETGAMLSERSTKEI

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=508, Percent_Identity=50.9842519685039, Blast_Score=516, Evalue=1e-147,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 59340; Mature: 59340

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSQARKSELLFSGSDWNFAKLARVYDEIEALGLEKLGLDIYPVQMEVISSEQMLDAYSS
CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCHHHHCCEEEEEHHHHHHHHHHHHHHHH
VGMPLMYRHWSFGKRFLYDELLYRKGARGLAHELVINSSPCIVYLMEENTMALQALVIAH
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCEEEEECCCHHHHHHHHHHH
AALGHNHFFKNNHLFRQWTDAGGILSYLDFAKSYIARCEERHGLTAVEAILDSAHALMEQ
HHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
GVFRYRRPPKLSSEQQREGLRERLEYEERSFNDLLRTLPPSPGKSKPEATDEILAERKKS
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
LKLPEENLLYFLEKNSLVLEPWQREIIRIVRIIAQYFYPQQQTQVMNEGCATFVHYTLMN
CCCCHHHEEEEEECCCEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
TLFDRCRISEGAMLEILRNHSNAVFQPAYDDPRYSRINPYALGLDMMQDIQRISTAPTAE
HHHHHHCCCCCHHHHHHHCCCCCEECCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCC
DRDWFPDIAGRGDWRDTLLDAWANHRDESFVRQYLSPTLIRKWRLFMLADSADEPHYEVA
CCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHEEEECCCCCCCHHHH
SIHNERGYAKIRSALAQSYDVGASRPDIQVIDVDLLGDRRLRLQHTVKNGIMLEGASRDA
HHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCEEEECCCCHH
TLRHIRNLWGYEVSMVALDAETGAMLSERSTKEI
HHHHHHHHHCCEEEEEEEECCCCHHHHCCCCCCC
>Mature Secondary Structure
MVSQARKSELLFSGSDWNFAKLARVYDEIEALGLEKLGLDIYPVQMEVISSEQMLDAYSS
CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCHHHHCCEEEEEHHHHHHHHHHHHHHHH
VGMPLMYRHWSFGKRFLYDELLYRKGARGLAHELVINSSPCIVYLMEENTMALQALVIAH
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCEEEEECCCHHHHHHHHHHH
AALGHNHFFKNNHLFRQWTDAGGILSYLDFAKSYIARCEERHGLTAVEAILDSAHALMEQ
HHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
GVFRYRRPPKLSSEQQREGLRERLEYEERSFNDLLRTLPPSPGKSKPEATDEILAERKKS
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
LKLPEENLLYFLEKNSLVLEPWQREIIRIVRIIAQYFYPQQQTQVMNEGCATFVHYTLMN
CCCCHHHEEEEEECCCEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
TLFDRCRISEGAMLEILRNHSNAVFQPAYDDPRYSRINPYALGLDMMQDIQRISTAPTAE
HHHHHHCCCCCHHHHHHHCCCCCEECCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCC
DRDWFPDIAGRGDWRDTLLDAWANHRDESFVRQYLSPTLIRKWRLFMLADSADEPHYEVA
CCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHEEEECCCCCCCHHHH
SIHNERGYAKIRSALAQSYDVGASRPDIQVIDVDLLGDRRLRLQHTVKNGIMLEGASRDA
HHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCEEEECCCCHH
TLRHIRNLWGYEVSMVALDAETGAMLSERSTKEI
HHHHHHHHHCCEEEEEEEECCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]