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The map label for this gene is 13488469

Identifier: 13488469

GI number: 13488469

Start: 89755

End: 90564

Strand: Direct

Name: 13488469

Synonym: mlr9624

Alternate gene names: NA

Gene position: 89755-90564 (Clockwise)

Preceding gene: 13488468

Following gene: 13488472

Centisome position: 43.09

GC content: 59.26

Gene sequence:

>810_bases
ATGGCCGTTCGTTCCTATTGGAAAGGATATCTGAAGCTCTCGTTGGTCACTTGCCCGGTGCAGATGATGCCGGCAACGTC
GGAGAGCGAAAAGGTCCGCTTTCATACGCTCAACCGCGAGACGAACAACCGCGTGGTCAGCCACTACGTCGATGCCGTCA
CGGGCAAGGAAGTCAAGGAGGAAGACGAGGTCAAGGGGTATCAGCGTGGAGAGAGCGATTACATCATTCTCGAAGACGAG
GAACTGGAGGACGTCGCCCTGGACAGCACCAGGACCATCGATATCGATGTGTTCTCGCCGCGCGATTCCATCGAATGGAT
CTGGCTCGACACGCCCTATTACCTGTCGCCGAACGATCCGGTCGGCCAGGAGGCCTTCTCGGTCATCCGCGACGCCATGG
CAGCAGAAGACATGGTCGGTATCTCCAGGCTGGTGATCTCGCGGCGCGAGCGCGCGGTGATGCTGGAACCGCGCGGCAAG
GGCATCGTATTATGGACCCTGCGCTATGGCGACGAGGTCAGGGACGAGGACGCCTATTTCGAGGGGATCGACGCGGACAA
ATCCGATCCCGAGATGATGCCCCTCATCCAGCAATTCATCAAGAAGCAGACCCGCCATTGGGACAGCAAACTCGTCTCCG
ACCCTGTGCAGGACAAGCTGCTGGACATCATCGAGGCTAAGCGGAAAAAGACAAAGCGACCGGCCAAGGCGAAGGCCTCC
GGGCCGACGGCGACGCCAAACAACGTCATCAATATCATGGACGCCCTGCGCAAGTCCGTCGAAGCGCAGAACAGTCCCGG
CAAGCGCTAG

Upstream 100 bases:

>100_bases
CCAGAAACCGAAACGCGCTGCTGCCGGGAAGACCGACGGCAACCGAAAGCAGCCCAAGCGCGTCGCCAACTCCAAACGCG
CGGCCTGATCGGAGACCATC

Downstream 100 bases:

>100_bases
ACGTCGGGATAGAGCCATTTCAAGGGACTGGCTGGCCTGTCATCTCGTAGACCATGTCCGGGAGCTAGGGGGTGATGTCC
TGCAATCTCACATTCTCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MAVRSYWKGYLKLSLVTCPVQMMPATSESEKVRFHTLNRETNNRVVSHYVDAVTGKEVKEEDEVKGYQRGESDYIILEDE
ELEDVALDSTRTIDIDVFSPRDSIEWIWLDTPYYLSPNDPVGQEAFSVIRDAMAAEDMVGISRLVISRRERAVMLEPRGK
GIVLWTLRYGDEVRDEDAYFEGIDADKSDPEMMPLIQQFIKKQTRHWDSKLVSDPVQDKLLDIIEAKRKKTKRPAKAKAS
GPTATPNNVINIMDALRKSVEAQNSPGKR

Sequences:

>Translated_269_residues
MAVRSYWKGYLKLSLVTCPVQMMPATSESEKVRFHTLNRETNNRVVSHYVDAVTGKEVKEEDEVKGYQRGESDYIILEDE
ELEDVALDSTRTIDIDVFSPRDSIEWIWLDTPYYLSPNDPVGQEAFSVIRDAMAAEDMVGISRLVISRRERAVMLEPRGK
GIVLWTLRYGDEVRDEDAYFEGIDADKSDPEMMPLIQQFIKKQTRHWDSKLVSDPVQDKLLDIIEAKRKKTKRPAKAKAS
GPTATPNNVINIMDALRKSVEAQNSPGKR
>Mature_268_residues
AVRSYWKGYLKLSLVTCPVQMMPATSESEKVRFHTLNRETNNRVVSHYVDAVTGKEVKEEDEVKGYQRGESDYIILEDEE
LEDVALDSTRTIDIDVFSPRDSIEWIWLDTPYYLSPNDPVGQEAFSVIRDAMAAEDMVGISRLVISRRERAVMLEPRGKG
IVLWTLRYGDEVRDEDAYFEGIDADKSDPEMMPLIQQFIKKQTRHWDSKLVSDPVQDKLLDIIEAKRKKTKRPAKAKASG
PTATPNNVINIMDALRKSVEAQNSPGKR

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 30739; Mature: 30608

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVRSYWKGYLKLSLVTCPVQMMPATSESEKVRFHTLNRETNNRVVSHYVDAVTGKEVKE
CCCHHHHHHHEEEEEEECCCEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCC
EDEVKGYQRGESDYIILEDEELEDVALDSTRTIDIDVFSPRDSIEWIWLDTPYYLSPNDP
HHHHHHHHCCCCCEEEEECCCCCHHCCCCCEEEEEEEECCCCCEEEEEECCCEEECCCCC
VGQEAFSVIRDAMAAEDMVGISRLVISRRERAVMLEPRGKGIVLWTLRYGDEVRDEDAYF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEECCCCCCCCCCCC
EGIDADKSDPEMMPLIQQFIKKQTRHWDSKLVSDPVQDKLLDIIEAKRKKTKRPAKAKAS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC
GPTATPNNVINIMDALRKSVEAQNSPGKR
CCCCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AVRSYWKGYLKLSLVTCPVQMMPATSESEKVRFHTLNRETNNRVVSHYVDAVTGKEVKE
CCHHHHHHHEEEEEEECCCEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCC
EDEVKGYQRGESDYIILEDEELEDVALDSTRTIDIDVFSPRDSIEWIWLDTPYYLSPNDP
HHHHHHHHCCCCCEEEEECCCCCHHCCCCCEEEEEEEECCCCCEEEEEECCCEEECCCCC
VGQEAFSVIRDAMAAEDMVGISRLVISRRERAVMLEPRGKGIVLWTLRYGDEVRDEDAYF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEECCCCCCCCCCCC
EGIDADKSDPEMMPLIQQFIKKQTRHWDSKLVSDPVQDKLLDIIEAKRKKTKRPAKAKAS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC
GPTATPNNVINIMDALRKSVEAQNSPGKR
CCCCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA