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The map label for this gene is 13488468

Identifier: 13488468

GI number: 13488468

Start: 88876

End: 89742

Strand: Direct

Name: 13488468

Synonym: mlr9623

Alternate gene names: NA

Gene position: 88876-89742 (Clockwise)

Preceding gene: 13488467

Following gene: 13488469

Centisome position: 42.66

GC content: 62.28

Gene sequence:

>867_bases
ATGGTTGCAGCGCGAGCGAATTGGAAGGGTTACATCAAATTCGGCGAGGTTGCCTGCGCGGTGGCGCTCTATACCGCCGC
GTCGTCGTCCGAGCGCATCGCCTTCAACACGCTCAACCGCGCCACTGGTAACCGCGTCCGCCGCGAGTTTATCGATAGCG
AGACTGGCGATCCGGTCGAGCGCGACGATCAAGTAAAGGGGTACGAGATGGAGAACGGCGACTACGTCGTGCTCGAACCC
GAGGAAGTCGCTGCCGCCGTCCCGGAGAGCGACAAGACGCTTAAGATCGAGGCGTTCGTGCCCTGCGACGAGATTGACGA
CGTCTATTTCGACAAGCCGTATTATCTCGCGCCGGACCGGATGGGCGCCGACGCGTTCAAGCTGCTGCGCGACGGCATGC
GACAGGCGAAAGTCGCCGCCCTGGCGCGTACGGTCCTGTTTCGGCGGCTGCGCACGGTGCTGATCCGCCCGCATGGCAAC
GGCCTGATCGGCACCACGCTGAACTTCGACTATGAGGTGCGCTCGGCGAAGGAAGCGTTCGCGGACATTCCCGAGATCAA
GATCGAGGGTGAGATGCTCGATCTCGCCAAACACATCATCGATACGAAGAAAGGCTCGTTTGACGCCAAGACCTTCGACG
ACCGCTACGACGCAGCGGTGGCCGAGCTCGTCAAGGCAAAGATAGAAGGTAGGCCACTGCCGAAGAAGAAGGCGCCGCCA
CCGTCGAAGCCTAGCGATCTTCTCGAGACCTTGCGCAGGAGCGCCGGACTGGTACCCGACCAGAAACCGAAACGCGCTGC
TGCCGGGAAGACCGACGGCAACCGAAAGCAGCCCAAGCGCGTCGCCAACTCCAAACGCGCGGCCTGA

Upstream 100 bases:

>100_bases
CGCCGCCAACTCGTTGAATTCAGATTCTTTTTGACTCTGGAACCATATCGGCGGCCTGCGGCTTATTGACTCGCAAAGGT
TGTGCCGGAGCGTGAGTGTC

Downstream 100 bases:

>100_bases
TCGGAGACCATCATGGCCGTTCGTTCCTATTGGAAAGGATATCTGAAGCTCTCGTTGGTCACTTGCCCGGTGCAGATGAT
GCCGGCAACGTCGGAGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MVAARANWKGYIKFGEVACAVALYTAASSSERIAFNTLNRATGNRVRREFIDSETGDPVERDDQVKGYEMENGDYVVLEP
EEVAAAVPESDKTLKIEAFVPCDEIDDVYFDKPYYLAPDRMGADAFKLLRDGMRQAKVAALARTVLFRRLRTVLIRPHGN
GLIGTTLNFDYEVRSAKEAFADIPEIKIEGEMLDLAKHIIDTKKGSFDAKTFDDRYDAAVAELVKAKIEGRPLPKKKAPP
PSKPSDLLETLRRSAGLVPDQKPKRAAAGKTDGNRKQPKRVANSKRAA

Sequences:

>Translated_288_residues
MVAARANWKGYIKFGEVACAVALYTAASSSERIAFNTLNRATGNRVRREFIDSETGDPVERDDQVKGYEMENGDYVVLEP
EEVAAAVPESDKTLKIEAFVPCDEIDDVYFDKPYYLAPDRMGADAFKLLRDGMRQAKVAALARTVLFRRLRTVLIRPHGN
GLIGTTLNFDYEVRSAKEAFADIPEIKIEGEMLDLAKHIIDTKKGSFDAKTFDDRYDAAVAELVKAKIEGRPLPKKKAPP
PSKPSDLLETLRRSAGLVPDQKPKRAAAGKTDGNRKQPKRVANSKRAA
>Mature_288_residues
MVAARANWKGYIKFGEVACAVALYTAASSSERIAFNTLNRATGNRVRREFIDSETGDPVERDDQVKGYEMENGDYVVLEP
EEVAAAVPESDKTLKIEAFVPCDEIDDVYFDKPYYLAPDRMGADAFKLLRDGMRQAKVAALARTVLFRRLRTVLIRPHGN
GLIGTTLNFDYEVRSAKEAFADIPEIKIEGEMLDLAKHIIDTKKGSFDAKTFDDRYDAAVAELVKAKIEGRPLPKKKAPP
PSKPSDLLETLRRSAGLVPDQKPKRAAAGKTDGNRKQPKRVANSKRAA

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 31947; Mature: 31947

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAARANWKGYIKFGEVACAVALYTAASSSERIAFNTLNRATGNRVRREFIDSETGDPVE
CCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCC
RDDQVKGYEMENGDYVVLEPEEVAAAVPESDKTLKIEAFVPCDEIDDVYFDKPYYLAPDR
CCCCCCCEEECCCCEEEECHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCC
MGADAFKLLRDGMRQAKVAALARTVLFRRLRTVLIRPHGNGLIGTTLNFDYEVRSAKEAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCHHHHHHHHH
ADIPEIKIEGEMLDLAKHIIDTKKGSFDAKTFDDRYDAAVAELVKAKIEGRPLPKKKAPP
HCCCCEEECHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PSKPSDLLETLRRSAGLVPDQKPKRAAAGKTDGNRKQPKRVANSKRAA
CCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MVAARANWKGYIKFGEVACAVALYTAASSSERIAFNTLNRATGNRVRREFIDSETGDPVE
CCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCC
RDDQVKGYEMENGDYVVLEPEEVAAAVPESDKTLKIEAFVPCDEIDDVYFDKPYYLAPDR
CCCCCCCEEECCCCEEEECHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCC
MGADAFKLLRDGMRQAKVAALARTVLFRRLRTVLIRPHGNGLIGTTLNFDYEVRSAKEAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCHHHHHHHHH
ADIPEIKIEGEMLDLAKHIIDTKKGSFDAKTFDDRYDAAVAELVKAKIEGRPLPKKKAPP
HCCCCEEECHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PSKPSDLLETLRRSAGLVPDQKPKRAAAGKTDGNRKQPKRVANSKRAA
CCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA