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The map label for this gene is 13488459

Identifier: 13488459

GI number: 13488459

Start: 80584

End: 80916

Strand: Reverse

Name: 13488459

Synonym: mll9610

Alternate gene names: NA

Gene position: 80916-80584 (Counterclockwise)

Preceding gene: 13488460

Following gene: 13488458

Centisome position: 38.84

GC content: 62.46

Gene sequence:

>333_bases
ATGATCCGCCTGCTTTCGCGCTGCCGCGCCAGCCTGGCCGCGGCCAGCGTCGCAATTGCCGTCAACCTCATGGTCGCTCC
GGTCGCCCATGCATCGGGCTCCTCGATGCCGTGGGAACAGCCGCTCGAAAAGATCCTGCAGTCGGTCGAGGGCCCGGTCT
CCAAGATCATGGCCGTCATCATCATCATCGTCACCGGCCTGACGCTGGCCTTCGGCGACAGTTCGGGCGGCTTCAGACGG
CTCATCCAGATCGTTTTTGGTCTCTCGATCGCCTTTGCGGCGTCGAGTTTCTTTCTGTCGTTCTTCTCGTTCGGCGGCGG
GGCATTGATCTGA

Upstream 100 bases:

>100_bases
CCGCGCGACGGCTTGTCGAACTGGTCAGGGTCGAGGGTCTCGGCGCCGACGGCGACTACCGCATTGCTGAAGCCACCCCG
ATCAAAACAGGAGAAACTTC

Downstream 100 bases:

>100_bases
TGGCGGCCGCTCTCGAACAACTCGACGCTGTGCCGGGATGGACGGTGCCTGTCCACCGGGCGCTGACCGAGCAGATCATG
CTTGGCGGCGCGCCGCGCGG

Product: conjugal transfer protein; TrbC

Products: NA

Alternate protein names: Conjugal Transfer Protein; Conjugal Transfer Protein Trbc; TrbC-Like Protein; Conjugal Transfer Protein TRBC; Conjugative Transfer Protein TrbC; Type IV Secretory Pathway VirB2 Component; Conjugal Transfer TrbC Transmembrane Protein

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MIRLLSRCRASLAAASVAIAVNLMVAPVAHASGSSMPWEQPLEKILQSVEGPVSKIMAVIIIIVTGLTLAFGDSSGGFRR
LIQIVFGLSIAFAASSFFLSFFSFGGGALI

Sequences:

>Translated_110_residues
MIRLLSRCRASLAAASVAIAVNLMVAPVAHASGSSMPWEQPLEKILQSVEGPVSKIMAVIIIIVTGLTLAFGDSSGGFRR
LIQIVFGLSIAFAASSFFLSFFSFGGGALI
>Mature_110_residues
MIRLLSRCRASLAAASVAIAVNLMVAPVAHASGSSMPWEQPLEKILQSVEGPVSKIMAVIIIIVTGLTLAFGDSSGGFRR
LIQIVFGLSIAFAASSFFLSFFSFGGGALI

Specific function: Unknown

COG id: COG3838

COG function: function code U; Type IV secretory pathway, VirB2 components (pilins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11474; Mature: 11474

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLLSRCRASLAAASVAIAVNLMVAPVAHASGSSMPWEQPLEKILQSVEGPVSKIMAVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH
IIIVTGLTLAFGDSSGGFRRLIQIVFGLSIAFAASSFFLSFFSFGGGALI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIRLLSRCRASLAAASVAIAVNLMVAPVAHASGSSMPWEQPLEKILQSVEGPVSKIMAVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH
IIIVTGLTLAFGDSSGGFRRLIQIVFGLSIAFAASSFFLSFFSFGGGALI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA