Click here to switch to the map view.

The map label for this gene is 13488455

Identifier: 13488455

GI number: 13488455

Start: 75385

End: 76872

Strand: Reverse

Name: 13488455

Synonym: mll9606

Alternate gene names: NA

Gene position: 76872-75385 (Counterclockwise)

Preceding gene: 13488456

Following gene: 13488454

Centisome position: 36.9

GC content: 66.2

Gene sequence:

>1488_bases
ATGTGCGCGGCTGTGGGCCGATCAGCGCGACCGCTTCCTTGGCCTCGAAAAGCCGTCTGGGCTCCCGACAGGCGAACCGG
CCTCGCCAGATGCTTCCATGCTCAGGGGTCGATAGACATGGGCAATACCGGCGTCATCGACCAATTCCTGGCCACCTTCA
CCCGCTATATCGACAGCGGCTTCGGCCTGCTCGGCGGTGAGGTCGCCTTCGTCGCCACCACGCTGATCGTCATCGATGTG
ACGCTTGCCGCGCTCTTCTGGAGCTGGGGCGCCGACGACGACATCCTCGCCAGGCTCGTCAAGAAGACGCTCTTCGTCGG
TGTCTTCGCCTATCTGATTTCCAATTGGAACGGTCTCGCCCAGATCGTATTCGAGAGTTTCTCCGGCCTTGGTCTGAAGG
CGAGCGGAACCGGCTTCTCGGCACAGGACCTGCTGCACCCCGGCAAGGTGGCGCAAACCGGTCTCGATGCGGGACGACCC
TTGCTTGAGGCGATCTCCGGTTTGATGGGCTACGTCTCCTTCTTTGAAAACTTCATCCAGATCGCTTGCCTGCTTTTTGC
CTGGGCGCTTGTCCTGCTCGCCTTCTTCATCTTGGCCGTGCAGCTTTTTGTGACTCTGATCGAGTTCAAGCTGGCGACCT
TAGCTGGCTTTGTGCTGATCCCTTTCGGCCTCTTCGGCAAGACTGCCTTCATGGCCGAGCGCGTGCTGGGCAACGTCATC
TCGTCCGGCATCAAGGTTCTGGTGCTTGCCGTGGTTATCGGCATCGGATCGACGCTCTTCGGCGAATTCACCCAAGGCTT
TGGCAACGAGAGCCCCACCATCGACCAGGCCATGGCGATCGTGCTGGCGGCGCTGTCACTGCTCGGGCTTGGCACCTTCG
GCCCCGGCATCGCCAACGGCCTTGTGGCGGGCGGGCCGCAGCTTGGCGCCGGTGCGGCCGTCGGCACCGGCCTTGCCGCG
GGCGGCATGGCGGTTGTGGGCTATGGCGCAGCCGGCCTGGCGGCGCGAGGCGGGACAGCCGCGGCCTCGGGCGCGGTGTC
AGTCGCGCGTGGCGGCACGTCACTCGCCGGCGGTGGTTCGGCCGCTTATATGCTCGGCGCCGCCGGCCAGACTGGCGCGG
CAGGCATCGCCTCCGGCCTGGGCGGCATTGCGCGCGCCGGCGCGTCGGCGGCCGCCTCGCCGCTCAAGCGTGCCGCCGCA
AACACCGGTCGATCGCTCAAGTCAAGCTTCGCATCCGGCGCAAGTTCGGCGGCTGAAGTCACTGGCGGTTCGTCGACCAT
GGGAACGATCGGCGGTGCCGCGTTGGCAGCCGCGGCTCCTGCGTCCGGCGCGGGCAAGCCATCCGGCTCTCAAGGGCAAC
CGGAATGGGCCAGACGCTTGCAGCGCACCCAGCGCGTCTCTCACGGCGCGCAGACCGCCGCCCACGCGGTGCGCGCCGGC
GACAGCCATGGCGGCGGCGCTTCGATTTCTCTTTCTGAAGGCGAATGA

Upstream 100 bases:

>100_bases
GCGAGGGGCCGCGCATGCAGGCGGGCTCGATGCCAAATCCGCTTCGCGATCGGCTGCGCCGGTGCCAGACCCTCGGCGAG
GCTGCTTTGCGCGACGATGG

Downstream 100 bases:

>100_bases
CCCATGAACATCTTCAGGCGCCCCGCCGTCCACTATGGCAAGACCCTTCGGCCGGAAACCCCTTATCAAAAGGCCGAGCA
GATCTGGGACGAACGCATCG

Product: conjugal transfer protein TrbL

Products: NA

Alternate protein names: P-Type Conjugative Transfer Protein TrbL; TrbL/VirB6 Plasmid Conjugal Transfer Protein; Conjugal Transfer Protein; P-Type Conjugative Transfer Protein Trbl; Type IV Secretion System Protein; Conjugal Transfer Protein Trbl; Type IV Secretory Pathway TrbL Component; Conjugative Transfer Protein TrbL; Type IV Secretory Pathway TrbL-Like Protein

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MCAAVGRSARPLPWPRKAVWAPDRRTGLARCFHAQGSIDMGNTGVIDQFLATFTRYIDSGFGLLGGEVAFVATTLIVIDV
TLAALFWSWGADDDILARLVKKTLFVGVFAYLISNWNGLAQIVFESFSGLGLKASGTGFSAQDLLHPGKVAQTGLDAGRP
LLEAISGLMGYVSFFENFIQIACLLFAWALVLLAFFILAVQLFVTLIEFKLATLAGFVLIPFGLFGKTAFMAERVLGNVI
SSGIKVLVLAVVIGIGSTLFGEFTQGFGNESPTIDQAMAIVLAALSLLGLGTFGPGIANGLVAGGPQLGAGAAVGTGLAA
GGMAVVGYGAAGLAARGGTAAASGAVSVARGGTSLAGGGSAAYMLGAAGQTGAAGIASGLGGIARAGASAAASPLKRAAA
NTGRSLKSSFASGASSAAEVTGGSSTMGTIGGAALAAAAPASGAGKPSGSQGQPEWARRLQRTQRVSHGAQTAAHAVRAG
DSHGGGASISLSEGE

Sequences:

>Translated_495_residues
MCAAVGRSARPLPWPRKAVWAPDRRTGLARCFHAQGSIDMGNTGVIDQFLATFTRYIDSGFGLLGGEVAFVATTLIVIDV
TLAALFWSWGADDDILARLVKKTLFVGVFAYLISNWNGLAQIVFESFSGLGLKASGTGFSAQDLLHPGKVAQTGLDAGRP
LLEAISGLMGYVSFFENFIQIACLLFAWALVLLAFFILAVQLFVTLIEFKLATLAGFVLIPFGLFGKTAFMAERVLGNVI
SSGIKVLVLAVVIGIGSTLFGEFTQGFGNESPTIDQAMAIVLAALSLLGLGTFGPGIANGLVAGGPQLGAGAAVGTGLAA
GGMAVVGYGAAGLAARGGTAAASGAVSVARGGTSLAGGGSAAYMLGAAGQTGAAGIASGLGGIARAGASAAASPLKRAAA
NTGRSLKSSFASGASSAAEVTGGSSTMGTIGGAALAAAAPASGAGKPSGSQGQPEWARRLQRTQRVSHGAQTAAHAVRAG
DSHGGGASISLSEGE
>Mature_495_residues
MCAAVGRSARPLPWPRKAVWAPDRRTGLARCFHAQGSIDMGNTGVIDQFLATFTRYIDSGFGLLGGEVAFVATTLIVIDV
TLAALFWSWGADDDILARLVKKTLFVGVFAYLISNWNGLAQIVFESFSGLGLKASGTGFSAQDLLHPGKVAQTGLDAGRP
LLEAISGLMGYVSFFENFIQIACLLFAWALVLLAFFILAVQLFVTLIEFKLATLAGFVLIPFGLFGKTAFMAERVLGNVI
SSGIKVLVLAVVIGIGSTLFGEFTQGFGNESPTIDQAMAIVLAALSLLGLGTFGPGIANGLVAGGPQLGAGAAVGTGLAA
GGMAVVGYGAAGLAARGGTAAASGAVSVARGGTSLAGGGSAAYMLGAAGQTGAAGIASGLGGIARAGASAAASPLKRAAA
NTGRSLKSSFASGASSAAEVTGGSSTMGTIGGAALAAAAPASGAGKPSGSQGQPEWARRLQRTQRVSHGAQTAAHAVRAG
DSHGGGASISLSEGE

Specific function: Unknown

COG id: COG3846

COG function: function code U; Type IV secretory pathway, TrbL components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49246; Mature: 49246

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCEEECCCCC
>Mature Secondary Structure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CCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA