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The map label for this gene is trbI [H]

Identifier: 13488452

GI number: 13488452

Start: 72498

End: 73634

Strand: Reverse

Name: trbI [H]

Synonym: mll9603

Alternate gene names: 13488452

Gene position: 73634-72498 (Counterclockwise)

Preceding gene: 13488453

Following gene: 13488451

Centisome position: 35.35

GC content: 64.91

Gene sequence:

>1137_bases
ATGAACGAGCAGGACACGGCCGTCGAACCCATGCGCCTTCGCGCCGACCCGCCGCGCGTGACGCGACTGTCGCGCAAGAT
GCTTGCAGGCATCGGCTTCGTAGCCTCGCTCGGCATCGGCGGCGCGCTGATTTACGCCCTGCGCGACGCGGATACGGTCA
AGCAGGGCGAAGAGCTCTACCCAACCTCCAATCGGCCGCCTGCTGACGGACTTGCGCGCCTGCCGCGCGACTATGCCGGC
CCCGTCCTTGGGCCCCCGCTGCCTGGCGATCTCGGCAGGCCGATCCTCGATGCCCAAAACAGGGGACAGGCCGTCGTGCC
GCCTCCGATCGCAAGTCCCGCGATTGACGAAGCCGAGCAGCGGCGGCGGGCTGAGGAGGAAGCGGCAAGAACCTCGCGCG
TCTTCTTCCAGACAGCACAAGACGATACCAGGACGGCCGAAGCGTCCGCGCCTACAGGCAACGACCTTGCCGGTCAGAAC
AATCAGCGAAATGCGCAGGATCGCCAGCTTTCCTTCCTGTCGGCGGCCGCTGACCGGCGCACCGTGGCGCCGGATCACGT
CACGCCTCCGGCGTCACCTTATGTGCTGCAAGCCGGCGCCGTCATCCCGGCCGCGCTCATCACGGGTATCCGGTCGGACC
TGCCCGGCCAGATCAGTGCTCAGGTAACCGAAAATATCTATGACAGCCCAACCGGCCGCTCGCTGCTGATCCCGCAAGGC
ACTCGCGCTATCGGGCAATACGATAACGCAGTTGGTTCGGGGCAGCGTCGCGTGCTGCTCGTCTGGAACAGGCTGATTTT
TCCAAACGGGCGCTCCATCGTTTTGGAGCGGCAGCCTGGCGCAGATGCTCAGGGCTATGCCGGCCTCGAGGATGGCGTCG
ACTATCACTGGGGCGAGTTGTTCAAGGCAGCGGCGTTGTCGACAGTCTTGAGTGTTGGCGCGCAGGCCGGTTCGTCCGAC
CAAGACAGCGATATCGTTCGTGCTCTGCGCAGCGGCGCCTCCGATAGCGTCAGCCAGGTAGGCCAGCAGGTCGTTCAACA
GCAACTCGATATGGCGCCGACGCTTACGGTGCGACCCGGGTTCCCCGTTCGCGTGCTCGTTACCCGCGACCTTGTTCTTG
AACCATACGGAGGTTGA

Upstream 100 bases:

>100_bases
TCCGCACCGACGCAGGACGAACCGATGGATTATGGCCAAGGCTGGGCGACAGTAGCGCGTCGAAGGTGCCGAACTCAATG
CAGAGGGGAGGGCTGCAGCC

Downstream 100 bases:

>100_bases
CATGACCAAGTTGAAGCTCGCGATGATCGCCGACGATAAGCCAGTCAAGGTCACGGTGGAACTGCCGGCGTCCCTGCATC
GAGAGTTGGTGAAATACGCA

Product: conjugal transfer protein; TrbI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MNEQDTAVEPMRLRADPPRVTRLSRKMLAGIGFVASLGIGGALIYALRDADTVKQGEELYPTSNRPPADGLARLPRDYAG
PVLGPPLPGDLGRPILDAQNRGQAVVPPPIASPAIDEAEQRRRAEEEAARTSRVFFQTAQDDTRTAEASAPTGNDLAGQN
NQRNAQDRQLSFLSAAADRRTVAPDHVTPPASPYVLQAGAVIPAALITGIRSDLPGQISAQVTENIYDSPTGRSLLIPQG
TRAIGQYDNAVGSGQRRVLLVWNRLIFPNGRSIVLERQPGADAQGYAGLEDGVDYHWGELFKAAALSTVLSVGAQAGSSD
QDSDIVRALRSGASDSVSQVGQQVVQQQLDMAPTLTVRPGFPVRVLVTRDLVLEPYGG

Sequences:

>Translated_378_residues
MNEQDTAVEPMRLRADPPRVTRLSRKMLAGIGFVASLGIGGALIYALRDADTVKQGEELYPTSNRPPADGLARLPRDYAG
PVLGPPLPGDLGRPILDAQNRGQAVVPPPIASPAIDEAEQRRRAEEEAARTSRVFFQTAQDDTRTAEASAPTGNDLAGQN
NQRNAQDRQLSFLSAAADRRTVAPDHVTPPASPYVLQAGAVIPAALITGIRSDLPGQISAQVTENIYDSPTGRSLLIPQG
TRAIGQYDNAVGSGQRRVLLVWNRLIFPNGRSIVLERQPGADAQGYAGLEDGVDYHWGELFKAAALSTVLSVGAQAGSSD
QDSDIVRALRSGASDSVSQVGQQVVQQQLDMAPTLTVRPGFPVRVLVTRDLVLEPYGG
>Mature_378_residues
MNEQDTAVEPMRLRADPPRVTRLSRKMLAGIGFVASLGIGGALIYALRDADTVKQGEELYPTSNRPPADGLARLPRDYAG
PVLGPPLPGDLGRPILDAQNRGQAVVPPPIASPAIDEAEQRRRAEEEAARTSRVFFQTAQDDTRTAEASAPTGNDLAGQN
NQRNAQDRQLSFLSAAADRRTVAPDHVTPPASPYVLQAGAVIPAALITGIRSDLPGQISAQVTENIYDSPTGRSLLIPQG
TRAIGQYDNAVGSGQRRVLLVWNRLIFPNGRSIVLERQPGADAQGYAGLEDGVDYHWGELFKAAALSTVLSVGAQAGSSD
QDSDIVRALRSGASDSVSQVGQQVVQQQLDMAPTLTVRPGFPVRVLVTRDLVLEPYGG

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 40247; Mature: 40247

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEQDTAVEPMRLRADPPRVTRLSRKMLAGIGFVASLGIGGALIYALRDADTVKQGEELY
CCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCC
PTSNRPPADGLARLPRDYAGPVLGPPLPGDLGRPILDAQNRGQAVVPPPIASPAIDEAEQ
CCCCCCCHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHH
RRRAEEEAARTSRVFFQTAQDDTRTAEASAPTGNDLAGQNNQRNAQDRQLSFLSAAADRR
HHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
TVAPDHVTPPASPYVLQAGAVIPAALITGIRSDLPGQISAQVTENIYDSPTGRSLLIPQG
CCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEECCCC
TRAIGQYDNAVGSGQRRVLLVWNRLIFPNGRSIVLERQPGADAQGYAGLEDGVDYHWGEL
CHHHHHHHHHCCCCCCEEEEEECCEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHH
FKAAALSTVLSVGAQAGSSDQDSDIVRALRSGASDSVSQVGQQVVQQQLDMAPTLTVRPG
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCC
FPVRVLVTRDLVLEPYGG
CCEEEEEEECEEECCCCC
>Mature Secondary Structure
MNEQDTAVEPMRLRADPPRVTRLSRKMLAGIGFVASLGIGGALIYALRDADTVKQGEELY
CCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCC
PTSNRPPADGLARLPRDYAGPVLGPPLPGDLGRPILDAQNRGQAVVPPPIASPAIDEAEQ
CCCCCCCHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHH
RRRAEEEAARTSRVFFQTAQDDTRTAEASAPTGNDLAGQNNQRNAQDRQLSFLSAAADRR
HHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
TVAPDHVTPPASPYVLQAGAVIPAALITGIRSDLPGQISAQVTENIYDSPTGRSLLIPQG
CCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEECCCC
TRAIGQYDNAVGSGQRRVLLVWNRLIFPNGRSIVLERQPGADAQGYAGLEDGVDYHWGEL
CHHHHHHHHHCCCCCCEEEEEECCEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHH
FKAAALSTVLSVGAQAGSSDQDSDIVRALRSGASDSVSQVGQQVVQQQLDMAPTLTVRPG
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCC
FPVRVLVTRDLVLEPYGG
CCEEEEEEECEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]