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The map label for this gene is 13488445

Identifier: 13488445

GI number: 13488445

Start: 66209

End: 66712

Strand: Reverse

Name: 13488445

Synonym: msl9596

Alternate gene names: NA

Gene position: 66712-66209 (Counterclockwise)

Preceding gene: 13488446

Following gene: 13488442

Centisome position: 32.02

GC content: 59.72

Gene sequence:

>504_bases
GTGGTTCGACGCGCCTGTGGAGTATGGCCCGCCAAAAACGATCTACAATCGCTTCATTCGCTGGAGCAGGCTGGGCGTGT
TCAACAGGATTTTCGCGGCACTCACGGCGAAGGGTGGGAAGCCCGACCATCTGGTGATCGATGCGACCCACCTGAAAGCC
CACCGGACGGAAGCAAGCCTGCTCAAAAAGGGGTTGTTCCCCGACGTATCGGACGTACCAAAGGCGGTCTGAACTCGAAG
CTACATGCCGTCTGCGATGGCAAAGGCAGACCGCTGGTGATGCTGCTGAGCGAGGGGCAGATGAGCGACTACAAAGGCGC
TGCCCTCATGATCGACGCTTTGCCCACGGCCAAAGCCTTGCTCGCAGACAGGGGCTATGACGCCGACTGGTTCCGCGCCG
CTCTCGCAGAGCGCAAGATCACCGCCTGCATCCCGTCAAAGGTCAACAGAAAAGTGCCGATCCCGCACGATGTCGCACTC
TATCGCCAGCGCCACAAAGATTGA

Upstream 100 bases:

>100_bases
GCCGCATCGAGCCATATTTTCCGCTGTCCCACGGCGTGCCTCATGTCGATGATCGTCGGATCATCAGTGGGATCATCTTC
GTGATCAGGAATGGCTTGCG

Downstream 100 bases:

>100_bases
GAACATGTTCGGCAGGCTCGAGGATTGGCGATGCATCCACACTCGCTACGACCGCTGTGCGCACGCCTTCATGTCTGCCA
TCTGCATCGCAGCCACCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase IS4 Family; ISSpo7 Transposase; IS66 Orf2 Family Protein; Transposase And Inactivated Derivatives-Like Protein; LOW QUALITY PROTEIN Transposase; Transposase Of; IS5 Family Transposase; Transposase IS5 Family Protein

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MVRRACGVWPAKNDLQSLHSLEQAGRVQQDFRGTHGEGWEARPSGDRCDPPESPPDGSKPAQKGVVPRRIGRTKGGLNSK
LHAVCDGKGRPLVMLLSEGQMSDYKGAALMIDALPTAKALLADRGYDADWFRAALAERKITACIPSKVNRKVPIPHDVAL
YRQRHKD

Sequences:

>Translated_167_residues
MVRRACGVWPAKNDLQSLHSLEQAGRVQQDFRGTHGEGWEARPSGDRCDPPESPPDGSKPAQKGVVPRRIGRTKGGLNSK
LHAVCDGKGRPLVMLLSEGQMSDYKGAALMIDALPTAKALLADRGYDADWFRAALAERKITACIPSKVNRKVPIPHDVAL
YRQRHKD
>Mature_167_residues
MVRRACGVWPAKNDLQSLHSLEQAGRVQQDFRGTHGEGWEARPSGDRCDPPESPPDGSKPAQKGVVPRRIGRTKGGLNSK
LHAVCDGKGRPLVMLLSEGQMSDYKGAALMIDALPTAKALLADRGYDADWFRAALAERKITACIPSKVNRKVPIPHDVAL
YRQRHKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18315; Mature: 18315

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRRACGVWPAKNDLQSLHSLEQAGRVQQDFRGTHGEGWEARPSGDRCDPPESPPDGSKP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AQKGVVPRRIGRTKGGLNSKLHAVCDGKGRPLVMLLSEGQMSDYKGAALMIDALPTAKAL
HHHCCCHHHHCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEEEECCCHHHHH
LADRGYDADWFRAALAERKITACIPSKVNRKVPIPHDVALYRQRHKD
HHCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MVRRACGVWPAKNDLQSLHSLEQAGRVQQDFRGTHGEGWEARPSGDRCDPPESPPDGSKP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AQKGVVPRRIGRTKGGLNSKLHAVCDGKGRPLVMLLSEGQMSDYKGAALMIDALPTAKAL
HHHCCCHHHHCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEEEECCCHHHHH
LADRGYDADWFRAALAERKITACIPSKVNRKVPIPHDVALYRQRHKD
HHCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA