Click here to switch to the map view.

The map label for this gene is 13488439

Identifier: 13488439

GI number: 13488439

Start: 57922

End: 58392

Strand: Reverse

Name: 13488439

Synonym: mll9589

Alternate gene names: NA

Gene position: 58392-57922 (Counterclockwise)

Preceding gene: 13488442

Following gene: 13488438

Centisome position: 28.03

GC content: 57.11

Gene sequence:

>471_bases
ATGGATATTCCTAAAGGCACGACGGTTGCTGTGGCGGATGGCGAAAGGCTCAATCTTTTCCGCAATTCAGGAGACGAAGC
CAATCCAACGCTGCCGGCTTCGGTCGTGGAAGACGTGGCAAATGAGAACAAGGGATCCGGAGCGCGTCATCAGAGCAGCT
CCGCCAATCCGGACAACAGTCAAATCGAGGAGGACAGTTTTGCGGCCGGAACCGCCGAACTGCTCAACCGAAAGGTCCTC
GGCGGACAAATCGCCAACCTGACCATCATCGCCGCTCCTCGAACGCTTGGCGAACTGCGCAAGCACTATCATCAGAAATT
ATCGGACGTTCTGATTGGCGAAATCGCCAAGGATCTCACCGGCCATGGCCCAGGAGAAGGCAGTTGCCAGCGCCTAGGGC
GCATCATCGACAGAAACTCAAATCTGCATCGCGCCCGCGCTATGATCGTCTTCGCGCCTGCGCCGAACTGA

Upstream 100 bases:

>100_bases
GATACAAGCATCCATTGGCGGGTTGGGGCGTTAAGACTGACGTCAGCAGGCCTCCAAACCGCATAGCCAAGGCTGGCGCG
ATATCGGAGAACATTCGCAC

Downstream 100 bases:

>100_bases
AGGACTTTAATCATGATAAAATCCATTGGATGGCTAGCCGCAGCAGTGCTTTGCATTGCAGCGCCTGCTCAGGCCGCTGA
CGGCGCCTTTTTGAAATCGT

Product: AtsE

Products: NA

Alternate protein names: Attachment-Related Protein; Protein Required For Attachment Host Cells; AtsE Protein

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MDIPKGTTVAVADGERLNLFRNSGDEANPTLPASVVEDVANENKGSGARHQSSSANPDNSQIEEDSFAAGTAELLNRKVL
GGQIANLTIIAAPRTLGELRKHYHQKLSDVLIGEIAKDLTGHGPGEGSCQRLGRIIDRNSNLHRARAMIVFAPAPN

Sequences:

>Translated_156_residues
MDIPKGTTVAVADGERLNLFRNSGDEANPTLPASVVEDVANENKGSGARHQSSSANPDNSQIEEDSFAAGTAELLNRKVL
GGQIANLTIIAAPRTLGELRKHYHQKLSDVLIGEIAKDLTGHGPGEGSCQRLGRIIDRNSNLHRARAMIVFAPAPN
>Mature_156_residues
MDIPKGTTVAVADGERLNLFRNSGDEANPTLPASVVEDVANENKGSGARHQSSSANPDNSQIEEDSFAAGTAELLNRKVL
GGQIANLTIIAAPRTLGELRKHYHQKLSDVLIGEIAKDLTGHGPGEGSCQRLGRIIDRNSNLHRARAMIVFAPAPN

Specific function: Unknown

COG id: COG5622

COG function: function code N; Protein required for attachment to host cells

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16585; Mature: 16585

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIPKGTTVAVADGERLNLFRNSGDEANPTLPASVVEDVANENKGSGARHQSSSANPDNS
CCCCCCCEEEEECCCEEEHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
QIEEDSFAAGTAELLNRKVLGGQIANLTIIAAPRTLGELRKHYHQKLSDVLIGEIAKDLT
CCCCCHHCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHGPGEGSCQRLGRIIDRNSNLHRARAMIVFAPAPN
CCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCC
>Mature Secondary Structure
MDIPKGTTVAVADGERLNLFRNSGDEANPTLPASVVEDVANENKGSGARHQSSSANPDNS
CCCCCCCEEEEECCCEEEHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
QIEEDSFAAGTAELLNRKVLGGQIANLTIIAAPRTLGELRKHYHQKLSDVLIGEIAKDLT
CCCCCHHCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHGPGEGSCQRLGRIIDRNSNLHRARAMIVFAPAPN
CCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA