| Definition | Mesorhizobium loti MAFF303099 plasmid pMLb, complete sequence. |
|---|---|
| Accession | NC_002682 |
| Length | 208,315 |
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The map label for this gene is 13488414
Identifier: 13488414
GI number: 13488414
Start: 39302
End: 39694
Strand: Direct
Name: 13488414
Synonym: mlr9558
Alternate gene names: NA
Gene position: 39302-39694 (Clockwise)
Preceding gene: 13488412
Following gene: 13488415
Centisome position: 18.87
GC content: 64.38
Gene sequence:
>393_bases GTGGCCAAGCGCCTGCTCGGCTATGATTCCCGCAACAGGCTGCGCATCCGCCAGATCGAGGCGTTCACGCTCTTTCTCGA AGCGGGCATCCGCAAGGCCGCCGACGTCATCGAGATCTCGCCGGGCTGGAACCGCACCTGGCGGGCGATGTGCCCGAACT ACCGCTGCGTCGACTTCCCCCGCCGTCGACCTCTACAAGCAATATTCGATCGTCATCGCCGACCAGGTGCTGGAACATGT CCAGTGGCCGCACGCAGCGGTGCAAAACATCCATGCCATGACCAGGCCCGGCGGCTGGGCGATGGTGGCGAGGCCCTTCC TGTTCCGGGTACATGCCCGGCCGCACGACTACAACAGATGGACGCCCGCCGGTCTCAAGCTGTTAATGGCTGA
Upstream 100 bases:
>100_bases TGCCCATTTGCCTGGGCTAGGCTGTTTTTCACGGCGGGCTTTGGAGGAGGTCATCTGATGACGACAAGCTTGCCGGCACC CTGAAAACCGCGGCAAACAG
Downstream 100 bases:
>100_bases AGGCGGCTTCCCCCAAGCAAACTTGAAGGTTCACGGCTGGGGTAAAAAGGCGTGCGCCCGGGCTCATATCGGTGGCCCGG TGCGCGCCTACGGCCTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MAKRLLGYDSRNRLRIRQIEAFTLFLEAGIRKAADVIEISPGWNRTWRAMCPNYRCVDFPRRRPLQAIFDRHRRPGAGTC PVAARSGAKHPCHDQARRLGDGGEALPVPGTCPAARLQQMDARRSQAVNG
Sequences:
>Translated_130_residues MAKRLLGYDSRNRLRIRQIEAFTLFLEAGIRKAADVIEISPGWNRTWRAMCPNYRCVDFPRRRPLQAIFDRHRRPGAGTC PVAARSGAKHPCHDQARRLGDGGEALPVPGTCPAARLQQMDARRSQAVNG >Mature_129_residues AKRLLGYDSRNRLRIRQIEAFTLFLEAGIRKAADVIEISPGWNRTWRAMCPNYRCVDFPRRRPLQAIFDRHRRPGAGTCP VAARSGAKHPCHDQARRLGDGGEALPVPGTCPAARLQQMDARRSQAVNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14591; Mature: 14460
Theoretical pI: Translated: 11.62; Mature: 11.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRLLGYDSRNRLRIRQIEAFTLFLEAGIRKAADVIEISPGWNRTWRAMCPNYRCVDFP CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHCCCCEECCCC RRRPLQAIFDRHRRPGAGTCPVAARSGAKHPCHDQARRLGDGGEALPVPGTCPAARLQQM CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHH DARRSQAVNG HHHHHHCCCC >Mature Secondary Structure AKRLLGYDSRNRLRIRQIEAFTLFLEAGIRKAADVIEISPGWNRTWRAMCPNYRCVDFP CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHCCCCEECCCC RRRPLQAIFDRHRRPGAGTCPVAARSGAKHPCHDQARRLGDGGEALPVPGTCPAARLQQM CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHH DARRSQAVNG HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA