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The map label for this gene is 13488410

Identifier: 13488410

GI number: 13488410

Start: 37137

End: 37817

Strand: Reverse

Name: 13488410

Synonym: mll9554

Alternate gene names: NA

Gene position: 37817-37137 (Counterclockwise)

Preceding gene: 13488411

Following gene: 13488409

Centisome position: 18.15

GC content: 62.56

Gene sequence:

>681_bases
ATGCACCGTCCCCTCGCGGAGCATGAGAACCTGGACAGCGCGATGTGCCGCAAAGAGTTCCGAACGCTCTCGCAGGCCCT
GACACTGCGCTACGACAAAGTGTTGTTCATCCTCGACCCCAGCGCCTTTCCGAAGAGACTGGCCGGCAAAAAGGTTGTTG
TTAGCGACTATCCCGACGGCCGCCTTGAGATCATGCATGGCAGCACGTCCCTACCCTACAGGACATTTGACAAGCTGCGC
TCGGTTCACAGATCGGAGCTTGTCGAGAGCAAGCGCCTGGACGAAGCGCTTGCGATGGTGGGCCGAGATGCAGGCTGGCC
GCGACCGTCAGCGCAGCCAACACGGCCCGCGCCGCACCGGCCAGGCGAACCACATGTTCGGCATTCCCGATGGCAGTCAG
AGCAATGGCTATTTGAAGCGCGGGCGCAAGCCGCGCAAACGGACCGACTTCATGAACGATCCCGCCGTGATTGCCCAGCG
AGAACAGGCTCTGGCGAGCGGCGGCTGAGTAATCTCCGATCAGTCCAGCGTCGACGATGGCTGCGCTCACCATTTCACCT
TGGAGCCGACCGAACCGCCAACCGCGTAGCTGTCGCCGAAATCCTGCGAGCGGCCGAGGCCGAGTCCGCCCTACAGCGCC
TGCGTCCTGCTGGAAACGTGCCGTCGAGGAAGTCGTGTTAG

Upstream 100 bases:

>100_bases
GCGCAACATCAGCACGATCGAGGCGGCGAACGCTTACGCGGCCGAGTTCGCTGCTGACTTCAATGTCCGCTTCTGGAAGG
AGCCGCGCAACCCGAAGGAC

Downstream 100 bases:

>100_bases
AGGTTGGCGATGCCATAGACATGCGATCGGCTCGTCTGTCCATTGGACCTCAACAGCCGATCGCTTGGAACTTCCGCGGC
AAAACGACGTTCGATCTTTT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MHRPLAEHENLDSAMCRKEFRTLSQALTLRYDKVLFILDPSAFPKRLAGKKVVVSDYPDGRLEIMHGSTSLPYRTFDKLR
SVHRSELVESKRLDEALAMVGRDAGWPRPSAQPTRPAPHRPGEPHVRHSRWQSEQWLFEARAQAAQTDRLHERSRRDCPA
RTGSGERRLSNLRSVQRRRWLRSPFHLGADRTANRVAVAEILRAAEAESALQRLRPAGNVPSRKSC

Sequences:

>Translated_226_residues
MHRPLAEHENLDSAMCRKEFRTLSQALTLRYDKVLFILDPSAFPKRLAGKKVVVSDYPDGRLEIMHGSTSLPYRTFDKLR
SVHRSELVESKRLDEALAMVGRDAGWPRPSAQPTRPAPHRPGEPHVRHSRWQSEQWLFEARAQAAQTDRLHERSRRDCPA
RTGSGERRLSNLRSVQRRRWLRSPFHLGADRTANRVAVAEILRAAEAESALQRLRPAGNVPSRKSC
>Mature_226_residues
MHRPLAEHENLDSAMCRKEFRTLSQALTLRYDKVLFILDPSAFPKRLAGKKVVVSDYPDGRLEIMHGSTSLPYRTFDKLR
SVHRSELVESKRLDEALAMVGRDAGWPRPSAQPTRPAPHRPGEPHVRHSRWQSEQWLFEARAQAAQTDRLHERSRRDCPA
RTGSGERRLSNLRSVQRRRWLRSPFHLGADRTANRVAVAEILRAAEAESALQRLRPAGNVPSRKSC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 25893; Mature: 25893

Theoretical pI: Translated: 11.53; Mature: 11.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRPLAEHENLDSAMCRKEFRTLSQALTLRYDKVLFILDPSAFPKRLAGKKVVVSDYPDG
CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHCCCEEEEECCCCC
RLEIMHGSTSLPYRTFDKLRSVHRSELVESKRLDEALAMVGRDAGWPRPSAQPTRPAPHR
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PGEPHVRHSRWQSEQWLFEARAQAAQTDRLHERSRRDCPARTGSGERRLSNLRSVQRRRW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LRSPFHLGADRTANRVAVAEILRAAEAESALQRLRPAGNVPSRKSC
HCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MHRPLAEHENLDSAMCRKEFRTLSQALTLRYDKVLFILDPSAFPKRLAGKKVVVSDYPDG
CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHCCCEEEEECCCCC
RLEIMHGSTSLPYRTFDKLRSVHRSELVESKRLDEALAMVGRDAGWPRPSAQPTRPAPHR
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PGEPHVRHSRWQSEQWLFEARAQAAQTDRLHERSRRDCPARTGSGERRLSNLRSVQRRRW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LRSPFHLGADRTANRVAVAEILRAAEAESALQRLRPAGNVPSRKSC
HCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]