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The map label for this gene is ynhG [C]

Identifier: 13488406

GI number: 13488406

Start: 32755

End: 33285

Strand: Reverse

Name: ynhG [C]

Synonym: mll9547

Alternate gene names: 13488406

Gene position: 33285-32755 (Counterclockwise)

Preceding gene: 13488409

Following gene: 13488403

Centisome position: 15.98

GC content: 60.83

Gene sequence:

>531_bases
TTGCTCAGGAGGCTCAATCCGGGCATCGGCTTCAGGAAGGCCGGCACTAAGTTGCTGGTTCCGGATATTGACCGGGGGGA
TTCTCCTGCCACGATTGCCGGCATCGAGGTCGACAAGGGCGCACGCCTGGTGCGCGTTCTTGATCCTTCCGGTAAATGGC
TCGCGGTCTTTCCCGCTTCCATCGGCAGTGCCGAGAAGCCGGCGCCGAGCGGCGAGGCGGAGGTCAAACGCGTCGTGCGC
AATCCCACCTATCACTACGATCCGCGCTTCGCTTTCAAGGGGGTCAAAGCCAAACGGCCATTCACGATTGCGGCCGGACC
GAACAATCCCGTGGTCTGGATCGATCTTTCCATCGAGAGCTACGGTATTCACGGCACGCCCGAACCGGGCAAGATCGGCA
CGACCTTCTCGCATGGCTGCATCAGGTTGACCAACTGGGATGCCGAGGACCTCGCCTCCATGGTGCAAAAAGGTACAAAA
GTCAGCTTCAAGGACGAGATGGCGAACGCGGGCGGCGGGTCGCTTCAGTAG

Upstream 100 bases:

>100_bases
AGCGCATTCCGGCGCGCAGGGAGAGGATGGCACGCCTGCAGAGGCTCGGCTATCACAACGTCACGGAGAAGCTGGCCGAG
CGCTTCCACATAAGCGAGCA

Downstream 100 bases:

>100_bases
CACAAGGATGCTAATCGAACGACGAGCCGTCATATGAGCACGCTAATCAGTTCATATTTGGCTCACCGCTGCGCAATCTC
TGGCTCCAAGAGCTGACGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Spore protein YkuD homolog [H]

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MLRRLNPGIGFRKAGTKLLVPDIDRGDSPATIAGIEVDKGARLVRVLDPSGKWLAVFPASIGSAEKPAPSGEAEVKRVVR
NPTYHYDPRFAFKGVKAKRPFTIAAGPNNPVVWIDLSIESYGIHGTPEPGKIGTTFSHGCIRLTNWDAEDLASMVQKGTK
VSFKDEMANAGGGSLQ

Sequences:

>Translated_176_residues
MLRRLNPGIGFRKAGTKLLVPDIDRGDSPATIAGIEVDKGARLVRVLDPSGKWLAVFPASIGSAEKPAPSGEAEVKRVVR
NPTYHYDPRFAFKGVKAKRPFTIAAGPNNPVVWIDLSIESYGIHGTPEPGKIGTTFSHGCIRLTNWDAEDLASMVQKGTK
VSFKDEMANAGGGSLQ
>Mature_176_residues
MLRRLNPGIGFRKAGTKLLVPDIDRGDSPATIAGIEVDKGARLVRVLDPSGKWLAVFPASIGSAEKPAPSGEAEVKRVVR
NPTYHYDPRFAFKGVKAKRPFTIAAGPNNPVVWIDLSIESYGIHGTPEPGKIGTTFSHGCIRLTNWDAEDLASMVQKGTK
VSFKDEMANAGGGSLQ

Specific function: Probable enzyme that may play an important role in cell wall biology [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Spore wall. Note=Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=159, Percent_Identity=31.4465408805031, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 18869; Mature: 18869

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRLNPGIGFRKAGTKLLVPDIDRGDSPATIAGIEVDKGARLVRVLDPSGKWLAVFPAS
CCCCCCCCCCEECCCCEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECC
IGSAEKPAPSGEAEVKRVVRNPTYHYDPRFAFKGVKAKRPFTIAAGPNNPVVWIDLSIES
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEEEECCCCCEEEEEEEEEE
YGIHGTPEPGKIGTTFSHGCIRLTNWDAEDLASMVQKGTKVSFKDEMANAGGGSLQ
CCCCCCCCCCCCCCEECCCEEEEECCCHHHHHHHHHCCCCCEEHHHHCCCCCCCCC
>Mature Secondary Structure
MLRRLNPGIGFRKAGTKLLVPDIDRGDSPATIAGIEVDKGARLVRVLDPSGKWLAVFPAS
CCCCCCCCCCEECCCCEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECC
IGSAEKPAPSGEAEVKRVVRNPTYHYDPRFAFKGVKAKRPFTIAAGPNNPVVWIDLSIES
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEEEECCCCCEEEEEEEEEE
YGIHGTPEPGKIGTTFSHGCIRLTNWDAEDLASMVQKGTKVSFKDEMANAGGGSLQ
CCCCCCCCCCCCCCEECCCEEEEECCCHHHHHHHHHCCCCCEEHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA