| Definition | Mesorhizobium loti MAFF303099 plasmid pMLb, complete sequence. |
|---|---|
| Accession | NC_002682 |
| Length | 208,315 |
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The map label for this gene is thrC [H]
Identifier: 13488402
GI number: 13488402
Start: 29270
End: 30532
Strand: Reverse
Name: thrC [H]
Synonym: mll9542
Alternate gene names: 13488402
Gene position: 30532-29270 (Counterclockwise)
Preceding gene: 13488403
Following gene: 13488398
Centisome position: 14.66
GC content: 64.77
Gene sequence:
>1263_bases ATGCACGCAAATCGTGTCCTGGAGTTCGCTTGCATCCGATGCGGCGCTTCCGCTCCTGCGGACGTCACAATCGACTCCAG GGGATGCGCGCGCTGCCAAGACACCGCGCCGGCAAATCTTCGCCCGGTTTATGCGGTCCCGCACCTCGATCCTTTGGACG GCGCCACCAGCTCGCGCTCGCTGTGGCGTTTTGCGCATATGCTGCCTTGCACAGAAGCGGAGGCCGTAAGCCTTGGTGAG GGTCTGACACCTTTGCTTGCCGCACCGCGCATCGGCGCGTTTCTCGGCGTGCCTAACCTCGCAATCAAGGACGAAGGCCG AAACCCGACCTGGTCGCACAAGGACCGCTTCTCGACGATCGCGGTCAGCGTGGCGCGCGCACGTGGCGCGAAGATCGTCG CGACCGCCTCCTCGGGAAACGCCGGCGCTTCGCTGGCGGCGTACGCCGCCCGAGCCGGGTTGAAATGCGTCGTCACCACT TTCGCGGGATCAGCCGGCGCGATGCTGGCGCAGATCCGCAAGTATGGCGCGACGGTCCTGCCCTTGGTCAGCAAAATGGA CCGATGGTCACTGCTCGAACAGGCGGCGGCCCGCTACGACTGGTTCATCGCATCGCCCTATCACGGTCCTGTCGTCGGCA GCCATCCACTCGGCATCGAGGGCTACAAGACGATCGCCTATGAGATCGTCGAGCAATCAGATGGCACGGCGCCAGACTGG TGCGTCCTGCCGGTCTGCTATGGCGATGCGTTGTCCGGCGTGTGGGCCGGCTTTTGCGAGCTGTTCGCGCAAGGCTCGAT CACGCGCCTGCCTCGTCTCGTCGCGGCGGAGGTGCATGGGTCGCTGGCGGACGCTCTGGCCAGCGGCGCCGATGCGGTGA GTGAACGCCAGATGCTTTTCGACAGCCTTGCCGTATCGATCGGCACGCCGCGCAGCACCTTTCAGGCGCTGAAGGCGCTG CGCGAATCCGGCGGGCACGCCGTGCCCGTCAGCAATCACGGCCTGATCGCGATGCAGGAGCGCCTTGCGCGGGACGAAGG GATCTTTGCCGAACTGGCGTCGGTCACGCCGCTGATCGCGATATCGAAATTAAGGGACCAAGGTATCATCGCAACCCCAG ACCGTGTCGTGGCCGTCGTGACAGCCAGCGGCCTCAAGGACCTCGATCGGTCCGCCGGATCGAACGAACACGATCAGATC TTCCGGACGACGGACGACGCCTGGCGCTGGCTCGACAAGAACGGGCTGGATCTCGTTTCATAG
Upstream 100 bases:
>100_bases ATCGTTTCATGGATAAGGAATAGCCATGGCGAGCCGGCCGTTTCGCGACCTCAAACACGACATGTCCGCGCATATCTCAG GCGAGCAAAAGCAACCTGGT
Downstream 100 bases:
>100_bases ATTTTCCGCGGCGCCAACAGCCGGTGGCACTTCGCCTGCTGCCTGCGTTTTCAGCACATCGCCGAGGCTGCGACGCAACC AAAGAAAGCGCGTCCATTGC
Product: threonine synthase-like protein
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MHANRVLEFACIRCGASAPADVTIDSRGCARCQDTAPANLRPVYAVPHLDPLDGATSSRSLWRFAHMLPCTEAEAVSLGE GLTPLLAAPRIGAFLGVPNLAIKDEGRNPTWSHKDRFSTIAVSVARARGAKIVATASSGNAGASLAAYAARAGLKCVVTT FAGSAGAMLAQIRKYGATVLPLVSKMDRWSLLEQAAARYDWFIASPYHGPVVGSHPLGIEGYKTIAYEIVEQSDGTAPDW CVLPVCYGDALSGVWAGFCELFAQGSITRLPRLVAAEVHGSLADALASGADAVSERQMLFDSLAVSIGTPRSTFQALKAL RESGGHAVPVSNHGLIAMQERLARDEGIFAELASVTPLIAISKLRDQGIIATPDRVVAVVTASGLKDLDRSAGSNEHDQI FRTTDDAWRWLDKNGLDLVS
Sequences:
>Translated_420_residues MHANRVLEFACIRCGASAPADVTIDSRGCARCQDTAPANLRPVYAVPHLDPLDGATSSRSLWRFAHMLPCTEAEAVSLGE GLTPLLAAPRIGAFLGVPNLAIKDEGRNPTWSHKDRFSTIAVSVARARGAKIVATASSGNAGASLAAYAARAGLKCVVTT FAGSAGAMLAQIRKYGATVLPLVSKMDRWSLLEQAAARYDWFIASPYHGPVVGSHPLGIEGYKTIAYEIVEQSDGTAPDW CVLPVCYGDALSGVWAGFCELFAQGSITRLPRLVAAEVHGSLADALASGADAVSERQMLFDSLAVSIGTPRSTFQALKAL RESGGHAVPVSNHGLIAMQERLARDEGIFAELASVTPLIAISKLRDQGIIATPDRVVAVVTASGLKDLDRSAGSNEHDQI FRTTDDAWRWLDKNGLDLVS >Mature_420_residues MHANRVLEFACIRCGASAPADVTIDSRGCARCQDTAPANLRPVYAVPHLDPLDGATSSRSLWRFAHMLPCTEAEAVSLGE GLTPLLAAPRIGAFLGVPNLAIKDEGRNPTWSHKDRFSTIAVSVARARGAKIVATASSGNAGASLAAYAARAGLKCVVTT FAGSAGAMLAQIRKYGATVLPLVSKMDRWSLLEQAAARYDWFIASPYHGPVVGSHPLGIEGYKTIAYEIVEQSDGTAPDW CVLPVCYGDALSGVWAGFCELFAQGSITRLPRLVAAEVHGSLADALASGADAVSERQMLFDSLAVSIGTPRSTFQALKAL RESGGHAVPVSNHGLIAMQERLARDEGIFAELASVTPLIAISKLRDQGIIATPDRVVAVVTASGLKDLDRSAGSNEHDQI FRTTDDAWRWLDKNGLDLVS
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 44432; Mature: 44432
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHANRVLEFACIRCGASAPADVTIDSRGCARCQDTAPANLRPVYAVPHLDPLDGATSSRS CCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHH LWRFAHMLPCTEAEAVSLGEGLTPLLAAPRIGAFLGVPNLAIKDEGRNPTWSHKDRFSTI HHHHHHHCCCCCCHHHHCCCCCHHHHHCCCHHHHHCCCCEEEECCCCCCCCCCHHHHHHH AVSVARARGAKIVATASSGNAGASLAAYAARAGLKCVVTTFAGSAGAMLAQIRKYGATVL HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCHHH PLVSKMDRWSLLEQAAARYDWFIASPYHGPVVGSHPLGIEGYKTIAYEIVEQSDGTAPDW HHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCE CVLPVCYGDALSGVWAGFCELFAQGSITRLPRLVAAEVHGSLADALASGADAVSERQMLF EEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH DSLAVSIGTPRSTFQALKALRESGGHAVPVSNHGLIAMQERLARDEGIFAELASVTPLIA HHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH ISKLRDQGIIATPDRVVAVVTASGLKDLDRSAGSNEHDQIFRTTDDAWRWLDKNGLDLVS HHHHCCCCCEECCCCEEEEEECCCHHHHHHHCCCCCCHHEEECCHHHHHHHCCCCCCCCC >Mature Secondary Structure MHANRVLEFACIRCGASAPADVTIDSRGCARCQDTAPANLRPVYAVPHLDPLDGATSSRS CCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHH LWRFAHMLPCTEAEAVSLGEGLTPLLAAPRIGAFLGVPNLAIKDEGRNPTWSHKDRFSTI HHHHHHHCCCCCCHHHHCCCCCHHHHHCCCHHHHHCCCCEEEECCCCCCCCCCHHHHHHH AVSVARARGAKIVATASSGNAGASLAAYAARAGLKCVVTTFAGSAGAMLAQIRKYGATVL HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCHHH PLVSKMDRWSLLEQAAARYDWFIASPYHGPVVGSHPLGIEGYKTIAYEIVEQSDGTAPDW HHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCE CVLPVCYGDALSGVWAGFCELFAQGSITRLPRLVAAEVHGSLADALASGADAVSERQMLF EEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH DSLAVSIGTPRSTFQALKALRESGGHAVPVSNHGLIAMQERLARDEGIFAELASVTPLIA HHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH ISKLRDQGIIATPDRVVAVVTASGLKDLDRSAGSNEHDQIFRTTDDAWRWLDKNGLDLVS HHHHCCCCCEECCCCEEEEEECCCHHHHHHHCCCCCCHHEEECCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]