Click here to switch to the map view.

The map label for this gene is 13488380

Identifier: 13488380

GI number: 13488380

Start: 9201

End: 9905

Strand: Reverse

Name: 13488380

Synonym: mll9513

Alternate gene names: NA

Gene position: 9905-9201 (Counterclockwise)

Preceding gene: 13488381

Following gene: 13488379

Centisome position: 4.75

GC content: 58.16

Gene sequence:

>705_bases
ATGGCGGCTTCGACAAGGATCGCTCAGCCGGTGGAGGAGATCGAAATCGACGACTGCTGGCGGCAAATAGGCGTACGGGG
TGACAAATCATGTCCGCTACTAAAGCAGCATCTCCACTGCCGGAATTGCCCGACCTACAAGAAGATTGCACGACGCCTCC
TTGACCGTGCAGCACCGTCGGCATATCGCGGCGAATGGCCGGAAAACGCTGGTCGTGCAGGGATCGATTCGGCAGACGAC
GAGGCGATGCAGACGGCCGTTCTCTTCCGTTTGGGGGAGGAATGGCTGGCACTTCCGGTCGGTATTTTTCATGAAGTGGC
TGAATCTCGTCGCATTCATTCACTTCCACATCGCAGGAACAGTGCACTGCTCGGCATTGCTAATGTCCGTGGTGAATTGC
TCATTTGCCTGTCTCTGGCCGAATTGCTCGGGATAGACGAGCGCAAGGCGGGGGATCAAGGCACACGAACCAAGGTGTTT
CGCCGCCTAGTCGTGGTGGGCGAGCCCGACAAGCGGGTTGCTTTTACGGTTGATGAGATCCACGGCTTACATCGATACCA
GGAACGCGACACTCTCGCTGTTCCGGCCACGATTGGCAAGGCACTGTCAGCCGCTACGGTTGCCGTGCTGCCGTGGCAGG
GACGAGCCGTTGGCTGTCTCGATCCACGACAACTGCTCACGATGCTGGATCGGAGCATCGCATGA

Upstream 100 bases:

>100_bases
TTGTCCATCTGGCCTTGCTGCTTAGAAAGCAAGGCGACCATACCGGCGCCGAGGCGCTGGCCGGCCGGCTGGGTCGGGTC
CAGAAAAGGAGCGGCAGCTG

Downstream 100 bases:

>100_bases
CCGACGAAGACTTCAGCCAGGTTTCGATGCTCAGCCTCTTCCAGGCCGAACTGGAGACGCAGTCACAGGCTCTAACCTCT
GGGCTTCTGGCACTCGAACG

Product: hypothetical protein

Products: NA

Alternate protein names: Chemotaxis Signal Transduction Protein; CheW Domain-Containing Protein; Chemotaxis Protein; Chemotaxis-Related Protein; Signal Transducer CheW-Like Protein; Chemotaxis-Like Protein; CheW Domain-Containing Protein WspD; Chemotaxis Signal Transduction Protein CheW; CheW-Like Domain-Containing; CheW-Like Domain-Containing Protein; Chemotaxis Protein CheW

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MAASTRIAQPVEEIEIDDCWRQIGVRGDKSCPLLKQHLHCRNCPTYKKIARRLLDRAAPSAYRGEWPENAGRAGIDSADD
EAMQTAVLFRLGEEWLALPVGIFHEVAESRRIHSLPHRRNSALLGIANVRGELLICLSLAELLGIDERKAGDQGTRTKVF
RRLVVVGEPDKRVAFTVDEIHGLHRYQERDTLAVPATIGKALSAATVAVLPWQGRAVGCLDPRQLLTMLDRSIA

Sequences:

>Translated_234_residues
MAASTRIAQPVEEIEIDDCWRQIGVRGDKSCPLLKQHLHCRNCPTYKKIARRLLDRAAPSAYRGEWPENAGRAGIDSADD
EAMQTAVLFRLGEEWLALPVGIFHEVAESRRIHSLPHRRNSALLGIANVRGELLICLSLAELLGIDERKAGDQGTRTKVF
RRLVVVGEPDKRVAFTVDEIHGLHRYQERDTLAVPATIGKALSAATVAVLPWQGRAVGCLDPRQLLTMLDRSIA
>Mature_233_residues
AASTRIAQPVEEIEIDDCWRQIGVRGDKSCPLLKQHLHCRNCPTYKKIARRLLDRAAPSAYRGEWPENAGRAGIDSADDE
AMQTAVLFRLGEEWLALPVGIFHEVAESRRIHSLPHRRNSALLGIANVRGELLICLSLAELLGIDERKAGDQGTRTKVFR
RLVVVGEPDKRVAFTVDEIHGLHRYQERDTLAVPATIGKALSAATVAVLPWQGRAVGCLDPRQLLTMLDRSIA

Specific function: Unknown

COG id: COG0835

COG function: function code NT; Chemotaxis signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25967; Mature: 25836

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: PS50851 CHEW

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASTRIAQPVEEIEIDDCWRQIGVRGDKSCPLLKQHLHCRNCPTYKKIARRLLDRAAPS
CCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
AYRGEWPENAGRAGIDSADDEAMQTAVLFRLGEEWLALPVGIFHEVAESRRIHSLPHRRN
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SALLGIANVRGELLICLSLAELLGIDERKAGDQGTRTKVFRRLVVVGEPDKRVAFTVDEI
CEEEEEECCCCHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEHHHH
HGLHRYQERDTLAVPATIGKALSAATVAVLPWQGRAVGCLDPRQLLTMLDRSIA
HHHHHHHHCCCEECHHHHHHHHHHHEEEEECCCCCEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
AASTRIAQPVEEIEIDDCWRQIGVRGDKSCPLLKQHLHCRNCPTYKKIARRLLDRAAPS
CCCCHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
AYRGEWPENAGRAGIDSADDEAMQTAVLFRLGEEWLALPVGIFHEVAESRRIHSLPHRRN
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SALLGIANVRGELLICLSLAELLGIDERKAGDQGTRTKVFRRLVVVGEPDKRVAFTVDEI
CEEEEEECCCCHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEHHHH
HGLHRYQERDTLAVPATIGKALSAATVAVLPWQGRAVGCLDPRQLLTMLDRSIA
HHHHHHHHCCCEECHHHHHHHHHHHEEEEECCCCCEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA