| Definition | Mesorhizobium loti MAFF303099 plasmid pMLb, complete sequence. |
|---|---|
| Accession | NC_002682 |
| Length | 208,315 |
Click here to switch to the map view.
The map label for this gene is 13488373
Identifier: 13488373
GI number: 13488373
Start: 1273
End: 2133
Strand: Direct
Name: 13488373
Synonym: mlr9505
Alternate gene names: NA
Gene position: 1273-2133 (Clockwise)
Preceding gene: NA
Following gene: 13488384
Centisome position: 0.61
GC content: 54.01
Gene sequence:
>861_bases ATGATACGACGCTCCTTGTCTTCGTCCGTTTTTCTCACTTGCCTCGTGATGCTTAGCAACATCTTGGCATCGTGCTCGCC CTCGCCACAACCTGTCTCGGATGCTGACATAGACTTCCTCGCCTCCGATGCTCATGTCGTTGTCGGCGACGTGCCTCTCG TCTTGCCCTTTATTGCGCTCACCGGTTATGTCGCCGCGAAACCCTCATTCTCGCTCAACAGACAGCAAGATCGCCAGGCG GCGACAGATCGCTTGGAGGCGTTTCGCAAAGCTGCCATCAACCCCCAAGCCGCGCCGAAGATCGATCAGCTTGAGATTGC GGTGTATGCGTATGGATGGAATGACCTCGACCCGAAGCCGTTCAAAAGAATCTGTGCTCGGCTAAGTCGGCAATGGTCCA AGTCCGTTTGCGATGACCCATGGGCGGCGCTTAAACAGGCGATGCCGGAAAATCGCTTTTATGTTGTCGACGACAGGAAA TTTGATGCGTTCGACAACTATTTCACCGTTGGCGGCGAAAGCGTCTCCGACCAACTTCATTCGATGCAACTGAAGGTTAA CGAAGCATCTGTCGTTTGTGATCGGAATCTTGAGCCTTCCAAAACCGCTATTTGCACGGCAGCAATACCAATCAAACAGC ATCTTGCTGCAGTATGGACGGTTTGGGATAGCACTGGTGAGACCCATTCTCGGCAAGCTGAGCGCGAAGGCAAATCCATC ACCGCATTTGTGCGCCATGCTATCGGACCGTCCGAGGACTTCTCGGCTCTTCTCGCCGACGTATGCAAACTGAGGAACCC GAAGAGCAGTATCGGGCCGGGTGGCAGCCCTTGCGGTAGTCCTATTTCAAAATCGCGCTAA
Upstream 100 bases:
>100_bases TATGAAAGACGTCAGTTGGAAAACGACGCATTGCTGACGTTGCGACAATTCAGCGACAACCGCTAACTCTTCCGCAATCG GCATCATGTAGAGGCGGGGA
Downstream 100 bases:
>100_bases GTCCGCTTCCACCCCATCTCGGTCATTTCGCATTTATGAGTTCACGGCCTAGTCTGCGCTATATTCCGAGGGTTAATGCA ACAAACAGAGCCGGCGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MIRRSLSSSVFLTCLVMLSNILASCSPSPQPVSDADIDFLASDAHVVVGDVPLVLPFIALTGYVAAKPSFSLNRQQDRQA ATDRLEAFRKAAINPQAAPKIDQLEIAVYAYGWNDLDPKPFKRICARLSRQWSKSVCDDPWAALKQAMPENRFYVVDDRK FDAFDNYFTVGGESVSDQLHSMQLKVNEASVVCDRNLEPSKTAICTAAIPIKQHLAAVWTVWDSTGETHSRQAEREGKSI TAFVRHAIGPSEDFSALLADVCKLRNPKSSIGPGGSPCGSPISKSR
Sequences:
>Translated_286_residues MIRRSLSSSVFLTCLVMLSNILASCSPSPQPVSDADIDFLASDAHVVVGDVPLVLPFIALTGYVAAKPSFSLNRQQDRQA ATDRLEAFRKAAINPQAAPKIDQLEIAVYAYGWNDLDPKPFKRICARLSRQWSKSVCDDPWAALKQAMPENRFYVVDDRK FDAFDNYFTVGGESVSDQLHSMQLKVNEASVVCDRNLEPSKTAICTAAIPIKQHLAAVWTVWDSTGETHSRQAEREGKSI TAFVRHAIGPSEDFSALLADVCKLRNPKSSIGPGGSPCGSPISKSR >Mature_286_residues MIRRSLSSSVFLTCLVMLSNILASCSPSPQPVSDADIDFLASDAHVVVGDVPLVLPFIALTGYVAAKPSFSLNRQQDRQA ATDRLEAFRKAAINPQAAPKIDQLEIAVYAYGWNDLDPKPFKRICARLSRQWSKSVCDDPWAALKQAMPENRFYVVDDRK FDAFDNYFTVGGESVSDQLHSMQLKVNEASVVCDRNLEPSKTAICTAAIPIKQHLAAVWTVWDSTGETHSRQAEREGKSI TAFVRHAIGPSEDFSALLADVCKLRNPKSSIGPGGSPCGSPISKSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31300; Mature: 31300
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRSLSSSVFLTCLVMLSNILASCSPSPQPVSDADIDFLASDAHVVVGDVPLVLPFIAL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCEEEECCHHHHHHHHHH TGYVAAKPSFSLNRQQDRQAATDRLEAFRKAAINPQAAPKIDQLEIAVYAYGWNDLDPKP HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCHH FKRICARLSRQWSKSVCDDPWAALKQAMPENRFYVVDDRKFDAFDNYFTVGGESVSDQLH HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCCCHHHHHHH SMQLKVNEASVVCDRNLEPSKTAICTAAIPIKQHLAAVWTVWDSTGETHSRQAEREGKSI HHHEEECCCEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHH TAFVRHAIGPSEDFSALLADVCKLRNPKSSIGPGGSPCGSPISKSR HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIRRSLSSSVFLTCLVMLSNILASCSPSPQPVSDADIDFLASDAHVVVGDVPLVLPFIAL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCEEEECCHHHHHHHHHH TGYVAAKPSFSLNRQQDRQAATDRLEAFRKAAINPQAAPKIDQLEIAVYAYGWNDLDPKP HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCHH FKRICARLSRQWSKSVCDDPWAALKQAMPENRFYVVDDRKFDAFDNYFTVGGESVSDQLH HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCCCHHHHHHH SMQLKVNEASVVCDRNLEPSKTAICTAAIPIKQHLAAVWTVWDSTGETHSRQAEREGKSI HHHEEECCCEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHH TAFVRHAIGPSEDFSALLADVCKLRNPKSSIGPGGSPCGSPISKSR HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA