Click here to switch to the map view.

The map label for this gene is 13488265

Identifier: 13488265

GI number: 13488265

Start: 233985

End: 235055

Strand: Direct

Name: 13488265

Synonym: mlr9255

Alternate gene names: NA

Gene position: 233985-235055 (Clockwise)

Preceding gene: 13488264

Following gene: 13488266

Centisome position: 66.49

GC content: 58.92

Gene sequence:

>1071_bases
ATGAACTTCAATATCACGACGCTTCTGCAACAGGTCGACAGGTTCGGCAATAACTATGTATCGCAAGCCTACCAGAACCT
CGCGTCGGCCCTGACCGGCGGGGGACAGGTGGGTGTGGCCGGCCTGATGCTGACGCTGTACGTGATATTCTGGGCTATCA
GCATCTGGCAGGGAACCTCGACCGGATCGGGAAAGGAGATGGTCTGGCGCCTGTTCCGCGCCTTCGTCATCTACGCTCTG
GCGACGAGTTGGGGGGACTTTCAAACATATGCCTATTCGTTCGCGAATGAGACACCTTCGGCGATCGGGAACAGCCTGCT
CACGAGCGTGTCGGCCAATGTGACCGGGACATCGGCCGGGCTGAACTCCGTCAACTCCGTGCAGACGGCCCTGCAAAATA
TCTGGGATTCGCTTGCCAATTCCACGTCTGCCTTTATCAAGAGCCTTGGGGTGTTGAACTTCGGCGGCTACGTACTGGCG
GCGATCATCCTGGTCGTCGGCGCGCTGCTCATCGGTTACGCGATCTTCCTCATCATCCTGTCGAAGATCTTTCTTTGGCT
TTTGCTGGCGCTCGCCCCAGTGTTCATCATTCTCATGCTGTTCGGCTACACGACCCGGTTCTTCGCTGGCTGGGTAACCG
CGATCGTGCAGTACATGTGTGTGCAGATTCTGGTCTACGCCTTCTGCGCATTTTTCATCTCGATCACCCAGACCTATTTC
GACGCGGTCAACCGGTCGAACGGTGCTGCGACAACGACATTGACCGAAGCCGCGCCGCTCATCCTGATCTGCCTCGTCGG
CGTGCTGCTGCTGTCGCAAATCACAAACGTTGCCGCCTCTCTCGCGGGCGGAATTGGTATTGGAACTCCTTCGTTTGGGC
GGTTCTACGGCGGCGCTTTCGGATCGATGGGCCAAGCCGGTCAGCGGGCGCTGATGGGACGGATGGGCTGGAGCACGAGG
CAGGAACGCTTGGCGGGTCGCGAGCGGGCGCGCGTGAGCCTCGCACAGAGAAGGTACGAGGATTCAGCGGAATATGCACG
GCTTTCCCGAAAGCTGACGGATCCCGCATAG

Upstream 100 bases:

>100_bases
CGCTCGACCCAAAAACAGAACCGGCGAGGCCATTTGGGTGCGGTCCGATGAAGGCACTCAATAGCGATCCATCTCTGTTT
CCAGGTGGGATGGCGAAAAA

Downstream 100 bases:

>100_bases
GTTTGGGGCACCAATGAGCGATGTGAAGGAAAGCGCTGGGGGACCGGCGAAGGAAACCGAGTCTCCATTGCCGTACTACG
TGGATGCGGCAATCTGGGAA

Product: conjugal transfer protein

Products: NA

Alternate protein names: Conjugal Transfer Protein; Type IV Secretion Protein; Type IV Secretion; Type IV Secretory Pathway Component; VirB6 Conjugative Transfer Protein; VirB6 Protein

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MNFNITTLLQQVDRFGNNYVSQAYQNLASALTGGGQVGVAGLMLTLYVIFWAISIWQGTSTGSGKEMVWRLFRAFVIYAL
ATSWGDFQTYAYSFANETPSAIGNSLLTSVSANVTGTSAGLNSVNSVQTALQNIWDSLANSTSAFIKSLGVLNFGGYVLA
AIILVVGALLIGYAIFLIILSKIFLWLLLALAPVFIILMLFGYTTRFFAGWVTAIVQYMCVQILVYAFCAFFISITQTYF
DAVNRSNGAATTTLTEAAPLILICLVGVLLLSQITNVAASLAGGIGIGTPSFGRFYGGAFGSMGQAGQRALMGRMGWSTR
QERLAGRERARVSLAQRRYEDSAEYARLSRKLTDPA

Sequences:

>Translated_356_residues
MNFNITTLLQQVDRFGNNYVSQAYQNLASALTGGGQVGVAGLMLTLYVIFWAISIWQGTSTGSGKEMVWRLFRAFVIYAL
ATSWGDFQTYAYSFANETPSAIGNSLLTSVSANVTGTSAGLNSVNSVQTALQNIWDSLANSTSAFIKSLGVLNFGGYVLA
AIILVVGALLIGYAIFLIILSKIFLWLLLALAPVFIILMLFGYTTRFFAGWVTAIVQYMCVQILVYAFCAFFISITQTYF
DAVNRSNGAATTTLTEAAPLILICLVGVLLLSQITNVAASLAGGIGIGTPSFGRFYGGAFGSMGQAGQRALMGRMGWSTR
QERLAGRERARVSLAQRRYEDSAEYARLSRKLTDPA
>Mature_356_residues
MNFNITTLLQQVDRFGNNYVSQAYQNLASALTGGGQVGVAGLMLTLYVIFWAISIWQGTSTGSGKEMVWRLFRAFVIYAL
ATSWGDFQTYAYSFANETPSAIGNSLLTSVSANVTGTSAGLNSVNSVQTALQNIWDSLANSTSAFIKSLGVLNFGGYVLA
AIILVVGALLIGYAIFLIILSKIFLWLLLALAPVFIILMLFGYTTRFFAGWVTAIVQYMCVQILVYAFCAFFISITQTYF
DAVNRSNGAATTTLTEAAPLILICLVGVLLLSQITNVAASLAGGIGIGTPSFGRFYGGAFGSMGQAGQRALMGRMGWSTR
QERLAGRERARVSLAQRRYEDSAEYARLSRKLTDPA

Specific function: Unknown

COG id: COG3704

COG function: function code U; Type IV secretory pathway, VirB6 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38399; Mature: 38399

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFNITTLLQQVDRFGNNYVSQAYQNLASALTGGGQVGVAGLMLTLYVIFWAISIWQGTS
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TGSGKEMVWRLFRAFVIYALATSWGDFQTYAYSFANETPSAIGNSLLTSVSANVTGTSAG
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHH
LNSVNSVQTALQNIWDSLANSTSAFIKSLGVLNFGGYVLAAIILVVGALLIGYAIFLIIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SKIFLWLLLALAPVFIILMLFGYTTRFFAGWVTAIVQYMCVQILVYAFCAFFISITQTYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAVNRSNGAATTTLTEAAPLILICLVGVLLLSQITNVAASLAGGIGIGTPSFGRFYGGAF
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHH
GSMGQAGQRALMGRMGWSTRQERLAGRERARVSLAQRRYEDSAEYARLSRKLTDPA
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNFNITTLLQQVDRFGNNYVSQAYQNLASALTGGGQVGVAGLMLTLYVIFWAISIWQGTS
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TGSGKEMVWRLFRAFVIYALATSWGDFQTYAYSFANETPSAIGNSLLTSVSANVTGTSAG
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHH
LNSVNSVQTALQNIWDSLANSTSAFIKSLGVLNFGGYVLAAIILVVGALLIGYAIFLIIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SKIFLWLLLALAPVFIILMLFGYTTRFFAGWVTAIVQYMCVQILVYAFCAFFISITQTYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAVNRSNGAATTTLTEAAPLILICLVGVLLLSQITNVAASLAGGIGIGTPSFGRFYGGAF
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHH
GSMGQAGQRALMGRMGWSTRQERLAGRERARVSLAQRRYEDSAEYARLSRKLTDPA
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA