| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488264
Identifier: 13488264
GI number: 13488264
Start: 233045
End: 233758
Strand: Direct
Name: 13488264
Synonym: mlr9253
Alternate gene names: NA
Gene position: 233045-233758 (Clockwise)
Preceding gene: 13488263
Following gene: 13488265
Centisome position: 66.22
GC content: 60.5
Gene sequence:
>714_bases ATGCGTGGAATTCCGTTAACAGCGGCACTCTTGCTTGGCCTTGGCGGCATCGCCTTTGCGCAAGTGCCTACGATCGACGA GGCTAATCTGGAACAGGCTCGGCAGATTGCATCGGCCACGAGCGAGATCCTCAGCACCGACCGCAACATCATGAACTATA CACAAAAGACGCTCCAGGCCGTCACGGGCGACCGTTCGAGCCAGGCGGGCCAGCTCGCGCAGATGGCCTTGGGCGATGGC GGCTTCTCCATGGGGAGCGCGCCTTCGCTTGGTAGCGTGATCTCGGGCGGCTCGTTGTCGTTCGCCGGCCTCGGCAATGG ATCGCAGGGCATCGTTTCGAACATGATCAACGGCTTGCAGCTGGTGAAAACGATTTCGGGCCTGATCAATGGCCAGACGA CGCAGATGGATAAGAACTACAGCGCCCTGGTCAACGTCGCGGCCACGGTCACCGGACTGGTCGACTCCTCGCAAAATGGG GTGAAGACCCGTTCCAGCGCTTTTCAGTCGGGCGCTCAGCGGATCGGAACGGCGCAGGACATCAAGGGCTCGATCGATCA GAACAGCCAGATCATGGTGCAAACCGGTCTGACCGTGAACGAGCTGATCGGCGCGGTGAACACCGCGACGGCGGCCGCCA ATCAGGAAAACATCGATCGTATGAACCTGATCACGCAGGCCTCGCGGGGGCTCGAATACAAGTCCGGCCAATGA
Upstream 100 bases:
>100_bases GCAAATCCAAAGGGACGCGAACAGCGCCCCCGTCACCATGACGACTGACGAACTTATGTCGGCCGTCAAGCAATATCAGG CTCAATAGGAGAAAAGCGCT
Downstream 100 bases:
>100_bases CGGTGCGCTTTCTTCTATTGGCGGCCGCCATTATTGGCGCTGTCGCGACCTCGGGATGCAGCCACAAGCCACTCAAGGCT CCGTGCTCTCGTGAGGAGGG
Product: conjugal transfer protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MRGIPLTAALLLGLGGIAFAQVPTIDEANLEQARQIASATSEILSTDRNIMNYTQKTLQAVTGDRSSQAGQLAQMALGDG GFSMGSAPSLGSVISGGSLSFAGLGNGSQGIVSNMINGLQLVKTISGLINGQTTQMDKNYSALVNVAATVTGLVDSSQNG VKTRSSAFQSGAQRIGTAQDIKGSIDQNSQIMVQTGLTVNELIGAVNTATAAANQENIDRMNLITQASRGLEYKSGQ
Sequences:
>Translated_237_residues MRGIPLTAALLLGLGGIAFAQVPTIDEANLEQARQIASATSEILSTDRNIMNYTQKTLQAVTGDRSSQAGQLAQMALGDG GFSMGSAPSLGSVISGGSLSFAGLGNGSQGIVSNMINGLQLVKTISGLINGQTTQMDKNYSALVNVAATVTGLVDSSQNG VKTRSSAFQSGAQRIGTAQDIKGSIDQNSQIMVQTGLTVNELIGAVNTATAAANQENIDRMNLITQASRGLEYKSGQ >Mature_237_residues MRGIPLTAALLLGLGGIAFAQVPTIDEANLEQARQIASATSEILSTDRNIMNYTQKTLQAVTGDRSSQAGQLAQMALGDG GFSMGSAPSLGSVISGGSLSFAGLGNGSQGIVSNMINGLQLVKTISGLINGQTTQMDKNYSALVNVAATVTGLVDSSQNG VKTRSSAFQSGAQRIGTAQDIKGSIDQNSQIMVQTGLTVNELIGAVNTATAAANQENIDRMNLITQASRGLEYKSGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24327; Mature: 24327
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGIPLTAALLLGLGGIAFAQVPTIDEANLEQARQIASATSEILSTDRNIMNYTQKTLQA CCCCCHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VTGDRSSQAGQLAQMALGDGGFSMGSAPSLGSVISGGSLSFAGLGNGSQGIVSNMINGLQ HHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHHH LVKTISGLINGQTTQMDKNYSALVNVAATVTGLVDSSQNGVKTRSSAFQSGAQRIGTAQD HHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHH IKGSIDQNSQIMVQTGLTVNELIGAVNTATAAANQENIDRMNLITQASRGLEYKSGQ HCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRGIPLTAALLLGLGGIAFAQVPTIDEANLEQARQIASATSEILSTDRNIMNYTQKTLQA CCCCCHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VTGDRSSQAGQLAQMALGDGGFSMGSAPSLGSVISGGSLSFAGLGNGSQGIVSNMINGLQ HHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHHH LVKTISGLINGQTTQMDKNYSALVNVAATVTGLVDSSQNGVKTRSSAFQSGAQRIGTAQD HHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHH IKGSIDQNSQIMVQTGLTVNELIGAVNTATAAANQENIDRMNLITQASRGLEYKSGQ HCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA