Definition Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence.
Accession NC_002679
Length 351,911

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The map label for this gene is 13488261

Identifier: 13488261

GI number: 13488261

Start: 229432

End: 229740

Strand: Direct

Name: 13488261

Synonym: mlr9250

Alternate gene names: NA

Gene position: 229432-229740 (Clockwise)

Preceding gene: 13488260

Following gene: 13488262

Centisome position: 65.2

GC content: 60.19

Gene sequence:

>309_bases
ATGGCAGACGGCCGGATCGATCCTGGCGAGCCCAAATTGTTGATCACTCCGCTCGTCAAGGGCTTGACCCGAGCGCCGAC
GGTGCTCGGCATTCCCTACGAGCTTGCCGGGTTCATCGGCGTGCTGACGGCGGTCGTGTTCCTCGCAACCCATAATCTGC
TCATGCTCTGTATCTGCGTGCCGCTCTATGCGGTCGCCAGGATCGCGATCATGCGCGATTCCATGTTCATCGAGATCATG
TTCATCCGTTCACGAAAGACGCCACCCCGAAGCGCCAGCTTCTGGGGTGCGCGCAGTTATCGGGTGTGA

Upstream 100 bases:

>100_bases
CATGGTTTGTGGCCGGAAGCTGGGTTTTGGGCATCGTGCTGGTCTTCGGCTCGGCCCAGATCGTCGAATTCTTTCAGTCC
GCGGTCGGCAGGTGATCGGG

Downstream 100 bases:

>100_bases
CCGTGGCAATCGCGCGGGCTCTTCGTGATGAACTGAGTTTCGGGGCCGTATCTCGTCGGGAAAACCCCGTTTCGGCTCAC
ATACCCTATTCACGGCATGT

Product: conjugal transfer protein

Products: NA

Alternate protein names: Conjugal Transfer Protein

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MADGRIDPGEPKLLITPLVKGLTRAPTVLGIPYELAGFIGVLTAVVFLATHNLLMLCICVPLYAVARIAIMRDSMFIEIM
FIRSRKTPPRSASFWGARSYRV

Sequences:

>Translated_102_residues
MADGRIDPGEPKLLITPLVKGLTRAPTVLGIPYELAGFIGVLTAVVFLATHNLLMLCICVPLYAVARIAIMRDSMFIEIM
FIRSRKTPPRSASFWGARSYRV
>Mature_101_residues
ADGRIDPGEPKLLITPLVKGLTRAPTVLGIPYELAGFIGVLTAVVFLATHNLLMLCICVPLYAVARIAIMRDSMFIEIMF
IRSRKTPPRSASFWGARSYRV

Specific function: Unknown

COG id: COG3702

COG function: function code U; Type IV secretory pathway, VirB3 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11278; Mature: 11147

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADGRIDPGEPKLLITPLVKGLTRAPTVLGIPYELAGFIGVLTAVVFLATHNLLMLCICV
CCCCCCCCCCCCEEHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLYAVARIAIMRDSMFIEIMFIRSRKTPPRSASFWGARSYRV
HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADGRIDPGEPKLLITPLVKGLTRAPTVLGIPYELAGFIGVLTAVVFLATHNLLMLCICV
CCCCCCCCCCCEEHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLYAVARIAIMRDSMFIEIMFIRSRKTPPRSASFWGARSYRV
HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA