| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488257
Identifier: 13488257
GI number: 13488257
Start: 225410
End: 226648
Strand: Direct
Name: 13488257
Synonym: mlr9246
Alternate gene names: NA
Gene position: 225410-226648 (Clockwise)
Preceding gene: 13488256
Following gene: 13488258
Centisome position: 64.05
GC content: 58.03
Gene sequence:
>1239_bases ATGAGTGACTTTGCTATTCTGGGTCGCACGGTTGGCCCACAGCATCCGGAAATTCAGACGCTCTTGCGCCAGGCGCGGGA CAAGCAGGCCCGTGTCTTGTGTTTGTGTCGCCATCCCGGAGTGCCGATGTACATTGCCGCTGTCGGCGAGGAATTGATCG TCAAGCGCATGCCGAACACCGGCAAGGACCATGCGGTAGACTGTGATCGTTATGAACTGCCCCTTGCCCTGTCGGGAAAG GCCGAAGTCCTGGGTCAAGCGATCATTGAGGATCCTGCATCGGAGGCCGCGCGGCTGAAGCTGGCCTTTGCACTGACACA AGGCAAGGCGCGGCAGGGTTCATCCGGCGAGGGGACTTCGCACCACACAGTGAAAGCCGATCCGAAGAAGCTCACGCTGC GAGGCTTGCTTGACTATCTCTGGGAAGAGGCGGAACTGACATTAATGGCGCCCGGCTTTGTGGGAAAAAGAAATTGGGGG TTGGTCCGGAAATTTCTTTGGGGCGCGGCCGATGCAAAGTCGAGCCAGAAGTTCCAGTTGCGCGAGCTGCTGTTTATGCC GGCAATGTACTCGCCTGAACACAAGGATCGCCTGGCAGCGGATCGGGAGCGGGCTTTCGCGGCGGCAGCTAAGGCGAAGC ACAAGAAGATCGTGATCGGAATTGTGAAATCGCTGGATCCCGCCCGGTTTGGTGGCAAGCTGTCGATCAAGCATATGCCC GACGCGCCGCTCTTCCTGGATGAGAAAATGTTCAATGCAGTGCCGAAGCGCTTTGCAGGTGAATTAGACCTGTGGCGACT GCACGAAAATTCGCGCCTGATCACCATCGCAACGGTTATGCAGATGCCGTCCGGCATTCTGTCGATCGACGAAATCGGCT TTATGAACGTGACGGAGAATTGGATTCCGTTTCAGCACAACGACGAAAAGGAATTGATCGAGGTCCTGACCGGGGAGCAT CGGAGGTTTGTGAAAACGTTGCGCTACAACGTGCTGCCGGCGGTGCCGATGGCGTTCGGCCTTCTGACCGACGTTGACCA ACAGGGAACTGCGCTTTTTGTCGTACCGCACGATGCCGCGGAGACGGTACAGGCGGAATTCGACCATCTGATTTCAAGCT GCGAGCTCGAGACCTGGCGCTGGGACACAAGCGGTCCCCGACCGGCGCTACCGGGCAAACAGCAGCGGCTTTCGGCTCCG CCCGGCAGGCAGGCAGGCTTTGGAATATCGACCGAATAA
Upstream 100 bases:
>100_bases CAATCCATGGGGAGCATCGTTGATGCCCAGTGGGTTGAATGAGATATCGGTTCAATGATTTAATCATAGGGTAAACGATC TAAAGTCGGATGGCATCCTT
Downstream 100 bases:
>100_bases CTGAAAAGCCTAAGCGCGGGCGACGGCTGGCGCACCCAGAGGGCAGGCTGAGCCTAGGGGCTTGCGCCTGGCGCCGGTGT TTGCGCTAGAAGCGACCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MSDFAILGRTVGPQHPEIQTLLRQARDKQARVLCLCRHPGVPMYIAAVGEELIVKRMPNTGKDHAVDCDRYELPLALSGK AEVLGQAIIEDPASEAARLKLAFALTQGKARQGSSGEGTSHHTVKADPKKLTLRGLLDYLWEEAELTLMAPGFVGKRNWG LVRKFLWGAADAKSSQKFQLRELLFMPAMYSPEHKDRLAADRERAFAAAAKAKHKKIVIGIVKSLDPARFGGKLSIKHMP DAPLFLDEKMFNAVPKRFAGELDLWRLHENSRLITIATVMQMPSGILSIDEIGFMNVTENWIPFQHNDEKELIEVLTGEH RRFVKTLRYNVLPAVPMAFGLLTDVDQQGTALFVVPHDAAETVQAEFDHLISSCELETWRWDTSGPRPALPGKQQRLSAP PGRQAGFGISTE
Sequences:
>Translated_412_residues MSDFAILGRTVGPQHPEIQTLLRQARDKQARVLCLCRHPGVPMYIAAVGEELIVKRMPNTGKDHAVDCDRYELPLALSGK AEVLGQAIIEDPASEAARLKLAFALTQGKARQGSSGEGTSHHTVKADPKKLTLRGLLDYLWEEAELTLMAPGFVGKRNWG LVRKFLWGAADAKSSQKFQLRELLFMPAMYSPEHKDRLAADRERAFAAAAKAKHKKIVIGIVKSLDPARFGGKLSIKHMP DAPLFLDEKMFNAVPKRFAGELDLWRLHENSRLITIATVMQMPSGILSIDEIGFMNVTENWIPFQHNDEKELIEVLTGEH RRFVKTLRYNVLPAVPMAFGLLTDVDQQGTALFVVPHDAAETVQAEFDHLISSCELETWRWDTSGPRPALPGKQQRLSAP PGRQAGFGISTE >Mature_411_residues SDFAILGRTVGPQHPEIQTLLRQARDKQARVLCLCRHPGVPMYIAAVGEELIVKRMPNTGKDHAVDCDRYELPLALSGKA EVLGQAIIEDPASEAARLKLAFALTQGKARQGSSGEGTSHHTVKADPKKLTLRGLLDYLWEEAELTLMAPGFVGKRNWGL VRKFLWGAADAKSSQKFQLRELLFMPAMYSPEHKDRLAADRERAFAAAAKAKHKKIVIGIVKSLDPARFGGKLSIKHMPD APLFLDEKMFNAVPKRFAGELDLWRLHENSRLITIATVMQMPSGILSIDEIGFMNVTENWIPFQHNDEKELIEVLTGEHR RFVKTLRYNVLPAVPMAFGLLTDVDQQGTALFVVPHDAAETVQAEFDHLISSCELETWRWDTSGPRPALPGKQQRLSAPP GRQAGFGISTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45822; Mature: 45691
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFAILGRTVGPQHPEIQTLLRQARDKQARVLCLCRHPGVPMYIAAVGEELIVKRMPNT CCCCEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCEEHHHHHHHHHHHCCCCC GKDHAVDCDRYELPLALSGKAEVLGQAIIEDPASEAARLKLAFALTQGKARQGSSGEGTS CCCCCCCCCCEECCEEECCCHHHHHHHHHCCCHHHHHHEEEEEEEECCCCCCCCCCCCCC HHTVKADPKKLTLRGLLDYLWEEAELTLMAPGFVGKRNWGLVRKFLWGAADAKSSQKFQL CCEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCHHHH RELLFMPAMYSPEHKDRLAADRERAFAAAAKAKHKKIVIGIVKSLDPARFGGKLSIKHMP HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCCEEEEEECC DAPLFLDEKMFNAVPKRFAGELDLWRLHENSRLITIATVMQMPSGILSIDEIGFMNVTEN CCCCEEHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEHHHCCCCCEEHHCCCEEECCCC WIPFQHNDEKELIEVLTGEHRRFVKTLRYNVLPAVPMAFGLLTDVDQQGTALFVVPHDAA CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCHH ETVQAEFDHLISSCELETWRWDTSGPRPALPGKQQRLSAPPGRQAGFGISTE HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SDFAILGRTVGPQHPEIQTLLRQARDKQARVLCLCRHPGVPMYIAAVGEELIVKRMPNT CCCEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCEEHHHHHHHHHHHCCCCC GKDHAVDCDRYELPLALSGKAEVLGQAIIEDPASEAARLKLAFALTQGKARQGSSGEGTS CCCCCCCCCCEECCEEECCCHHHHHHHHHCCCHHHHHHEEEEEEEECCCCCCCCCCCCCC HHTVKADPKKLTLRGLLDYLWEEAELTLMAPGFVGKRNWGLVRKFLWGAADAKSSQKFQL CCEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCHHHH RELLFMPAMYSPEHKDRLAADRERAFAAAAKAKHKKIVIGIVKSLDPARFGGKLSIKHMP HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCCEEEEEECC DAPLFLDEKMFNAVPKRFAGELDLWRLHENSRLITIATVMQMPSGILSIDEIGFMNVTEN CCCCEEHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEHHHCCCCCEEHHCCCEEECCCC WIPFQHNDEKELIEVLTGEHRRFVKTLRYNVLPAVPMAFGLLTDVDQQGTALFVVPHDAA CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCHH ETVQAEFDHLISSCELETWRWDTSGPRPALPGKQQRLSAPPGRQAGFGISTE HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA