Definition Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence.
Accession NC_002679
Length 351,911

Click here to switch to the map view.

The map label for this gene is 13488253

Identifier: 13488253

GI number: 13488253

Start: 221000

End: 221590

Strand: Direct

Name: 13488253

Synonym: mlr9239

Alternate gene names: NA

Gene position: 221000-221590 (Clockwise)

Preceding gene: 13488252

Following gene: 13488254

Centisome position: 62.8

GC content: 62.61

Gene sequence:

>591_bases
ATGCACGAACGCCTGACATTTGTCGCAGTCGCGGCTGCCCTTACATTGGCGCCTCACGCTTCGGCTCAGTCGCTCACGCA
TGATCCGAACGCCTGGCGCGCCGTCGCCTATGCCGATCTCGAGCTCCCGAACTCGGAAGCTGTTCCCTACGCCTCGCTAT
GGGCCGACCGGCTGAAGAAGAACAACGACCTCTACGCGGCCAAAGGCGATACGCGCTTTGTGGTCGCCAACGCGCCGGCT
TCCGAGAGCCACATCGTCGTGCGCAGCCCGACGAAAACCGTCGTCCTCTCGGTCCTGCACACGCTTACCGGCTGCTCGCC
CATCCGCACGGACCCCGTCGGCAATGCCACGCTGAAACGATGCCCGATGCGCTTGGCGATCTATCAGAATGGCCGATCCA
CGGTCGCCGACGCTGGCTCCGGCTGTTTCATCGAATATGGCGCGCAACCGAACAACGTCCGCCCCGACCTCGCCCGGAAT
GGTGCGATGGGTGCATATGATGTTCAAGCCAAAACCATTCGCGCCGGCATCGTATTCCAAGGTGAAATCGCCCCGGAATG
CCAATTCCGGGTCCCTGTCCCGCAACCCTAG

Upstream 100 bases:

>100_bases
ATCCAGCCCCGATAAGCGAGCTTCTTGTTCCATCCAAATATCACGCTCGACAATCACTAGTACATTGATTTAATCATAGG
GCATACAAGCGAGGCAAGGA

Downstream 100 bases:

>100_bases
AGGAAGCAGCCCACGCCTGTGTTTCGGCAACCTCGATACCCCGAAGGAGCGCAATCATGATCGACATGGAGAACCTGACG
TTATTCAGGACACCAGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MHERLTFVAVAAALTLAPHASAQSLTHDPNAWRAVAYADLELPNSEAVPYASLWADRLKKNNDLYAAKGDTRFVVANAPA
SESHIVVRSPTKTVVLSVLHTLTGCSPIRTDPVGNATLKRCPMRLAIYQNGRSTVADAGSGCFIEYGAQPNNVRPDLARN
GAMGAYDVQAKTIRAGIVFQGEIAPECQFRVPVPQP

Sequences:

>Translated_196_residues
MHERLTFVAVAAALTLAPHASAQSLTHDPNAWRAVAYADLELPNSEAVPYASLWADRLKKNNDLYAAKGDTRFVVANAPA
SESHIVVRSPTKTVVLSVLHTLTGCSPIRTDPVGNATLKRCPMRLAIYQNGRSTVADAGSGCFIEYGAQPNNVRPDLARN
GAMGAYDVQAKTIRAGIVFQGEIAPECQFRVPVPQP
>Mature_196_residues
MHERLTFVAVAAALTLAPHASAQSLTHDPNAWRAVAYADLELPNSEAVPYASLWADRLKKNNDLYAAKGDTRFVVANAPA
SESHIVVRSPTKTVVLSVLHTLTGCSPIRTDPVGNATLKRCPMRLAIYQNGRSTVADAGSGCFIEYGAQPNNVRPDLARN
GAMGAYDVQAKTIRAGIVFQGEIAPECQFRVPVPQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21036; Mature: 21036

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHERLTFVAVAAALTLAPHASAQSLTHDPNAWRAVAYADLELPNSEAVPYASLWADRLKK
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHC
NNDLYAAKGDTRFVVANAPASESHIVVRSPTKTVVLSVLHTLTGCSPIRTDPVGNATLKR
CCCEEEECCCCEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
CPMRLAIYQNGRSTVADAGSGCFIEYGAQPNNVRPDLARNGAMGAYDVQAKTIRAGIVFQ
CCEEEEEEECCCCEECCCCCCEEEEECCCCCCCCCCHHCCCCCCEEEEEEEEEEEEEEEE
GEIAPECQFRVPVPQP
CCCCCCCEEECCCCCC
>Mature Secondary Structure
MHERLTFVAVAAALTLAPHASAQSLTHDPNAWRAVAYADLELPNSEAVPYASLWADRLKK
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHC
NNDLYAAKGDTRFVVANAPASESHIVVRSPTKTVVLSVLHTLTGCSPIRTDPVGNATLKR
CCCEEEECCCCEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
CPMRLAIYQNGRSTVADAGSGCFIEYGAQPNNVRPDLARNGAMGAYDVQAKTIRAGIVFQ
CCEEEEEEECCCCEECCCCCCEEEEECCCCCCCCCCHHCCCCCCEEEEEEEEEEEEEEEE
GEIAPECQFRVPVPQP
CCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA