| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488253
Identifier: 13488253
GI number: 13488253
Start: 221000
End: 221590
Strand: Direct
Name: 13488253
Synonym: mlr9239
Alternate gene names: NA
Gene position: 221000-221590 (Clockwise)
Preceding gene: 13488252
Following gene: 13488254
Centisome position: 62.8
GC content: 62.61
Gene sequence:
>591_bases ATGCACGAACGCCTGACATTTGTCGCAGTCGCGGCTGCCCTTACATTGGCGCCTCACGCTTCGGCTCAGTCGCTCACGCA TGATCCGAACGCCTGGCGCGCCGTCGCCTATGCCGATCTCGAGCTCCCGAACTCGGAAGCTGTTCCCTACGCCTCGCTAT GGGCCGACCGGCTGAAGAAGAACAACGACCTCTACGCGGCCAAAGGCGATACGCGCTTTGTGGTCGCCAACGCGCCGGCT TCCGAGAGCCACATCGTCGTGCGCAGCCCGACGAAAACCGTCGTCCTCTCGGTCCTGCACACGCTTACCGGCTGCTCGCC CATCCGCACGGACCCCGTCGGCAATGCCACGCTGAAACGATGCCCGATGCGCTTGGCGATCTATCAGAATGGCCGATCCA CGGTCGCCGACGCTGGCTCCGGCTGTTTCATCGAATATGGCGCGCAACCGAACAACGTCCGCCCCGACCTCGCCCGGAAT GGTGCGATGGGTGCATATGATGTTCAAGCCAAAACCATTCGCGCCGGCATCGTATTCCAAGGTGAAATCGCCCCGGAATG CCAATTCCGGGTCCCTGTCCCGCAACCCTAG
Upstream 100 bases:
>100_bases ATCCAGCCCCGATAAGCGAGCTTCTTGTTCCATCCAAATATCACGCTCGACAATCACTAGTACATTGATTTAATCATAGG GCATACAAGCGAGGCAAGGA
Downstream 100 bases:
>100_bases AGGAAGCAGCCCACGCCTGTGTTTCGGCAACCTCGATACCCCGAAGGAGCGCAATCATGATCGACATGGAGAACCTGACG TTATTCAGGACACCAGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MHERLTFVAVAAALTLAPHASAQSLTHDPNAWRAVAYADLELPNSEAVPYASLWADRLKKNNDLYAAKGDTRFVVANAPA SESHIVVRSPTKTVVLSVLHTLTGCSPIRTDPVGNATLKRCPMRLAIYQNGRSTVADAGSGCFIEYGAQPNNVRPDLARN GAMGAYDVQAKTIRAGIVFQGEIAPECQFRVPVPQP
Sequences:
>Translated_196_residues MHERLTFVAVAAALTLAPHASAQSLTHDPNAWRAVAYADLELPNSEAVPYASLWADRLKKNNDLYAAKGDTRFVVANAPA SESHIVVRSPTKTVVLSVLHTLTGCSPIRTDPVGNATLKRCPMRLAIYQNGRSTVADAGSGCFIEYGAQPNNVRPDLARN GAMGAYDVQAKTIRAGIVFQGEIAPECQFRVPVPQP >Mature_196_residues MHERLTFVAVAAALTLAPHASAQSLTHDPNAWRAVAYADLELPNSEAVPYASLWADRLKKNNDLYAAKGDTRFVVANAPA SESHIVVRSPTKTVVLSVLHTLTGCSPIRTDPVGNATLKRCPMRLAIYQNGRSTVADAGSGCFIEYGAQPNNVRPDLARN GAMGAYDVQAKTIRAGIVFQGEIAPECQFRVPVPQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21036; Mature: 21036
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHERLTFVAVAAALTLAPHASAQSLTHDPNAWRAVAYADLELPNSEAVPYASLWADRLKK CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHC NNDLYAAKGDTRFVVANAPASESHIVVRSPTKTVVLSVLHTLTGCSPIRTDPVGNATLKR CCCEEEECCCCEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH CPMRLAIYQNGRSTVADAGSGCFIEYGAQPNNVRPDLARNGAMGAYDVQAKTIRAGIVFQ CCEEEEEEECCCCEECCCCCCEEEEECCCCCCCCCCHHCCCCCCEEEEEEEEEEEEEEEE GEIAPECQFRVPVPQP CCCCCCCEEECCCCCC >Mature Secondary Structure MHERLTFVAVAAALTLAPHASAQSLTHDPNAWRAVAYADLELPNSEAVPYASLWADRLKK CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHC NNDLYAAKGDTRFVVANAPASESHIVVRSPTKTVVLSVLHTLTGCSPIRTDPVGNATLKR CCCEEEECCCCEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH CPMRLAIYQNGRSTVADAGSGCFIEYGAQPNNVRPDLARNGAMGAYDVQAKTIRAGIVFQ CCEEEEEEECCCCEECCCCCCEEEEECCCCCCCCCCHHCCCCCCEEEEEEEEEEEEEEEE GEIAPECQFRVPVPQP CCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA