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The map label for this gene is 13488249

Identifier: 13488249

GI number: 13488249

Start: 213684

End: 215198

Strand: Direct

Name: 13488249

Synonym: mlr9230

Alternate gene names: NA

Gene position: 213684-215198 (Clockwise)

Preceding gene: 13488370

Following gene: 13488250

Centisome position: 60.72

GC content: 61.58

Gene sequence:

>1515_bases
ATGGGACGGCTGAGCATGGCGACAAGGAAAGAACTGACGACGGCGGTTTCAGAGCGCTATCGTGCTTCGACGCGAGCGGA
GAAGGCGAGAATTTTGGATGAGTTCGTCGTCATCACGGGCTTTCACCGCAAGCACGCGATGCGGCTGCTACGACGCCGTG
AAGGGCCGTTTTCAGGCCGGCGAGCGCGGCCGCGAATTTATGATGAAGCGGAACGCAATGCGCTCATATTGCTCTGGGAG
GCGTCTGACCGCGTCTGCGGCAAGCGGCTGAAAGCGTTGCTGTCCGTCCTTATCGAGGCAATGGAACGGCACGGTCATTT
TGACCCAGCGCTGGAAATCCGGGGCAAATTGCTGGCGATGAGCGCGGCCACGATCGACAGGACGCTGCGACCGATCCGAG
AAGGCCTGGGACGTCCCCGACGACGGCCCGCGGCGCACGCCCTGCGACGGAGCATTCCCATTAGAACGTCGGCGGATTGG
GACGATCCTGCGCCAGGCTTCGTTGAGGCGGACCTCGTGGCCCATAGCGGCCCTTCGACTCGCGGCAGCTTCATCCAAAC
GTTCGTGCTCACCGACATCGCGACCGGCTGGACGGAATGTGCGCCCCTGCTGGTTCGCGAACAGACACTGTTGAGCACGG
TGCTCACTGAATTGCGCAAGCAACTGCCCTTCGCGCTTCTGGGCCTAGATACGGACAACGACACCGTTTTCATGAACGAG
ACGCTGAAGGCCTATTGCGACGCCGCCAACATCGTCTTCACGCGCTGCCGCCCCTACCGCAAGAATGACCAGGCCTTTGT
TGAGCAGAAGAATGGCGCCGTGGTGCGTAGGATGGTCGGATATCGTCGGTTCGAGGGGCTGGAGGCCGCCACGCTGCTAG
CGAAGCTCTACCGGTCAGCGCGGCTGTTCGTGAACTTCTTTCAGCCATCGTTCAAGTTGATCGCGAAGCAGCGCGACGGC
GCACGTATGCGCAAGACGTATAGTCCGCCAGCTACGCCGCATCAGCGTCTGGTTGCCGACGCTCGCACCTCCGATGCAGT
CCGCTCCCGTCTGCAGGAAATCTACGCCGGGCTCGATCCTGTCCTGCTATTGCGCGATATCCGCGCCGTGCAGGAGCGAC
TCGCTGCGCTTGCCGATACTTCGCAGGCCATCCGCCCTGACGGCACAGCTCAACCAATCGACCTTTTCCTGGCGAGTTTG
CGGACAGCTTGGAAGGACGGAGCTATCCGGCCGACGGATCGCCCGATTGTGAAGGCCAAAAGAGGGCGGCGGCGTCCTGA
CCCTCTCGTCAAGGCAACTGCCGACTTGCGAAATTGGTTCGAAGCCGAACCATGGCGAACCGGCAGCGAACTTCTGTCAC
GACTGCAGGCCGAGTATCCCGGCGATTACCCGAACAAACTGCTTCGAACACTTCAGCGTCGGCTGAAGGTCTGGCGCAGC
GAACAGGCGGACGCGCTGCTGTTTGGCCCCTTAAACAACGGGCCACCGATCCCGGAGATCGCAAGGCCAAACTGA

Upstream 100 bases:

>100_bases
AATCTGGTGTCGCGCATTGCCTCGCCTGAATTGTTCCCGAATATTCAACCGTTGCCTCACATAAGTTGCTCCCTACCGAG
GGGTATGAGCAGGGGCGACG

Downstream 100 bases:

>100_bases
GGCTTCCTGGCGCTCGCCAAGGAGGCCCGACGCTCCGAAACCCCGGCCATCTCCGCGCCGGGCCTCCTTCACCCAAGCCG
GGAGCAAAATGGATGAGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MGRLSMATRKELTTAVSERYRASTRAEKARILDEFVVITGFHRKHAMRLLRRREGPFSGRRARPRIYDEAERNALILLWE
ASDRVCGKRLKALLSVLIEAMERHGHFDPALEIRGKLLAMSAATIDRTLRPIREGLGRPRRRPAAHALRRSIPIRTSADW
DDPAPGFVEADLVAHSGPSTRGSFIQTFVLTDIATGWTECAPLLVREQTLLSTVLTELRKQLPFALLGLDTDNDTVFMNE
TLKAYCDAANIVFTRCRPYRKNDQAFVEQKNGAVVRRMVGYRRFEGLEAATLLAKLYRSARLFVNFFQPSFKLIAKQRDG
ARMRKTYSPPATPHQRLVADARTSDAVRSRLQEIYAGLDPVLLLRDIRAVQERLAALADTSQAIRPDGTAQPIDLFLASL
RTAWKDGAIRPTDRPIVKAKRGRRRPDPLVKATADLRNWFEAEPWRTGSELLSRLQAEYPGDYPNKLLRTLQRRLKVWRS
EQADALLFGPLNNGPPIPEIARPN

Sequences:

>Translated_504_residues
MGRLSMATRKELTTAVSERYRASTRAEKARILDEFVVITGFHRKHAMRLLRRREGPFSGRRARPRIYDEAERNALILLWE
ASDRVCGKRLKALLSVLIEAMERHGHFDPALEIRGKLLAMSAATIDRTLRPIREGLGRPRRRPAAHALRRSIPIRTSADW
DDPAPGFVEADLVAHSGPSTRGSFIQTFVLTDIATGWTECAPLLVREQTLLSTVLTELRKQLPFALLGLDTDNDTVFMNE
TLKAYCDAANIVFTRCRPYRKNDQAFVEQKNGAVVRRMVGYRRFEGLEAATLLAKLYRSARLFVNFFQPSFKLIAKQRDG
ARMRKTYSPPATPHQRLVADARTSDAVRSRLQEIYAGLDPVLLLRDIRAVQERLAALADTSQAIRPDGTAQPIDLFLASL
RTAWKDGAIRPTDRPIVKAKRGRRRPDPLVKATADLRNWFEAEPWRTGSELLSRLQAEYPGDYPNKLLRTLQRRLKVWRS
EQADALLFGPLNNGPPIPEIARPN
>Mature_503_residues
GRLSMATRKELTTAVSERYRASTRAEKARILDEFVVITGFHRKHAMRLLRRREGPFSGRRARPRIYDEAERNALILLWEA
SDRVCGKRLKALLSVLIEAMERHGHFDPALEIRGKLLAMSAATIDRTLRPIREGLGRPRRRPAAHALRRSIPIRTSADWD
DPAPGFVEADLVAHSGPSTRGSFIQTFVLTDIATGWTECAPLLVREQTLLSTVLTELRKQLPFALLGLDTDNDTVFMNET
LKAYCDAANIVFTRCRPYRKNDQAFVEQKNGAVVRRMVGYRRFEGLEAATLLAKLYRSARLFVNFFQPSFKLIAKQRDGA
RMRKTYSPPATPHQRLVADARTSDAVRSRLQEIYAGLDPVLLLRDIRAVQERLAALADTSQAIRPDGTAQPIDLFLASLR
TAWKDGAIRPTDRPIVKAKRGRRRPDPLVKATADLRNWFEAEPWRTGSELLSRLQAEYPGDYPNKLLRTLQRRLKVWRSE
QADALLFGPLNNGPPIPEIARPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 57181; Mature: 57050

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRLSMATRKELTTAVSERYRASTRAEKARILDEFVVITGFHRKHAMRLLRRREGPFSGR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCC
RARPRIYDEAERNALILLWEASDRVCGKRLKALLSVLIEAMERHGHFDPALEIRGKLLAM
CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
SAATIDRTLRPIREGLGRPRRRPAAHALRRSIPIRTSADWDDPAPGFVEADLVAHSGPST
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHCCCCCC
RGSFIQTFVLTDIATGWTECAPLLVREQTLLSTVLTELRKQLPFALLGLDTDNDTVFMNE
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEHH
TLKAYCDAANIVFTRCRPYRKNDQAFVEQKNGAVVRRMVGYRRFEGLEAATLLAKLYRSA
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
RLFVNFFQPSFKLIAKQRDGARMRKTYSPPATPHQRLVADARTSDAVRSRLQEIYAGLDP
HHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCH
VLLLRDIRAVQERLAALADTSQAIRPDGTAQPIDLFLASLRTAWKDGAIRPTDRPIVKAK
HHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
RGRRRPDPLVKATADLRNWFEAEPWRTGSELLSRLQAEYPGDYPNKLLRTLQRRLKVWRS
HCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
EQADALLFGPLNNGPPIPEIARPN
CCCCEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GRLSMATRKELTTAVSERYRASTRAEKARILDEFVVITGFHRKHAMRLLRRREGPFSGR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCC
RARPRIYDEAERNALILLWEASDRVCGKRLKALLSVLIEAMERHGHFDPALEIRGKLLAM
CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
SAATIDRTLRPIREGLGRPRRRPAAHALRRSIPIRTSADWDDPAPGFVEADLVAHSGPST
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHCCCCCC
RGSFIQTFVLTDIATGWTECAPLLVREQTLLSTVLTELRKQLPFALLGLDTDNDTVFMNE
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEHH
TLKAYCDAANIVFTRCRPYRKNDQAFVEQKNGAVVRRMVGYRRFEGLEAATLLAKLYRSA
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
RLFVNFFQPSFKLIAKQRDGARMRKTYSPPATPHQRLVADARTSDAVRSRLQEIYAGLDP
HHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCH
VLLLRDIRAVQERLAALADTSQAIRPDGTAQPIDLFLASLRTAWKDGAIRPTDRPIVKAK
HHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
RGRRRPDPLVKATADLRNWFEAEPWRTGSELLSRLQAEYPGDYPNKLLRTLQRRLKVWRS
HCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
EQADALLFGPLNNGPPIPEIARPN
CCCCEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]