| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488247
Identifier: 13488247
GI number: 13488247
Start: 203053
End: 204126
Strand: Direct
Name: 13488247
Synonym: mlr9221
Alternate gene names: NA
Gene position: 203053-204126 (Clockwise)
Preceding gene: 13488246
Following gene: 13488248
Centisome position: 57.7
GC content: 57.17
Gene sequence:
>1074_bases GTGCTGACAATGGTTTCTTCCCCGGCCCGCCCGATCGACTGCGACGTCCACGTGGCACTCCCAGACACTCGCGCGCTGCT ACCATATCTTGACGACTACTGGCGGGAGCACGTCATCCGCCGTGGTCTTGATCGCGAAGACTTAGAGCTCAGTTCGTATC CGCCAAGCCTCCCTCTATCGTGTCGCCCGGACTGGCGTCCCCAGCAAGGGCTTCCCGGTTCACAATTCGAGCAATTGCGG GATCAGGTACTTGACCCATTTCAGTCACGATTCGCCATTTGCAACGTGCTGCATGGCTCGCAGATCATGTTCAGCGAGGA CCTATCCGCAGCACTTTGTCGCGCCATAAACAACTGGATTAGCGCGGAATGGCTTGATCGCGACCCTCGACTTCGGGCGT CAATTGTCGTGCCGGTACACAGCCCTGAACTAGCAGTCGCAGAGATCGAACATCGCGCTGCCGATCTACGGTTCGTGCAG GTGCTCATGTTGGCTATGGGTGAGGTGCCACTTGGTAGGCGACAGAATTGGCCGATCTATGCCGCGGCCGAGCGCCACGA TTTGCCAATTGGCATCCATGCGGGAAGTAGTCTTCGCAATCCGCCCAGTCCCTTGGGCTGGTCGTCGCACTATATCGACG ACTACGTATCACAGGCACCGGGATTCTCTGGCGCTCTCAATAGCTTGGTGGTTGAAGGTGTTTTCAACAAATTTCCGCGC CTCAAGGTCGTATTGCTGGAGTCCGGTGTGACTTGGTTGCCGGCGCATCTATGGCGCGCGAATAAACAATGGCGCGGCGT ACGATCTGAAACTCCCTGGCTTACCCGCCCGCCGTCGGAGATTATTCGCGAGCATGTGCGGCTGACTGTCCAACCTTTCG ATGCCCCCCCAACAGACGGGCAGGTCCAGACGATCATCGATCAAATTGGCTCCGATGAAATGTTATTGTTCTCCACCGAC TATCCGCATTGGCATTTCGACGGAACCGATGCGGTTCCTCAGGGGCTATCGCACGAATCACTATCGAAGATGCTCGCGGA CAACGCTTTGGCGACCTATCCCCGCCTGAACTGA
Upstream 100 bases:
>100_bases AAAACTCCGACATGGGCCTGGTATCAAGAGCCCCAAACCACGCAACACGGCTGCAGTAGTAATGCATTGGTGAGTTACTC CTGCCAAGTCGCCAGACAAA
Downstream 100 bases:
>100_bases CCAAAGAACAGCGAAGATTACCAACATGGACACAAACCTGCTCAACCAGAAGCCGAAGGTCGCCGCTCCGAGCCATACGG GGTTTATTGACTGCGACATT
Product: hypothetical protein
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Metal-Dependent Hydrolase; Amidohydrolase Family; Barh Protein
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MLTMVSSPARPIDCDVHVALPDTRALLPYLDDYWREHVIRRGLDREDLELSSYPPSLPLSCRPDWRPQQGLPGSQFEQLR DQVLDPFQSRFAICNVLHGSQIMFSEDLSAALCRAINNWISAEWLDRDPRLRASIVVPVHSPELAVAEIEHRAADLRFVQ VLMLAMGEVPLGRRQNWPIYAAAERHDLPIGIHAGSSLRNPPSPLGWSSHYIDDYVSQAPGFSGALNSLVVEGVFNKFPR LKVVLLESGVTWLPAHLWRANKQWRGVRSETPWLTRPPSEIIREHVRLTVQPFDAPPTDGQVQTIIDQIGSDEMLLFSTD YPHWHFDGTDAVPQGLSHESLSKMLADNALATYPRLN
Sequences:
>Translated_357_residues MLTMVSSPARPIDCDVHVALPDTRALLPYLDDYWREHVIRRGLDREDLELSSYPPSLPLSCRPDWRPQQGLPGSQFEQLR DQVLDPFQSRFAICNVLHGSQIMFSEDLSAALCRAINNWISAEWLDRDPRLRASIVVPVHSPELAVAEIEHRAADLRFVQ VLMLAMGEVPLGRRQNWPIYAAAERHDLPIGIHAGSSLRNPPSPLGWSSHYIDDYVSQAPGFSGALNSLVVEGVFNKFPR LKVVLLESGVTWLPAHLWRANKQWRGVRSETPWLTRPPSEIIREHVRLTVQPFDAPPTDGQVQTIIDQIGSDEMLLFSTD YPHWHFDGTDAVPQGLSHESLSKMLADNALATYPRLN >Mature_357_residues MLTMVSSPARPIDCDVHVALPDTRALLPYLDDYWREHVIRRGLDREDLELSSYPPSLPLSCRPDWRPQQGLPGSQFEQLR DQVLDPFQSRFAICNVLHGSQIMFSEDLSAALCRAINNWISAEWLDRDPRLRASIVVPVHSPELAVAEIEHRAADLRFVQ VLMLAMGEVPLGRRQNWPIYAAAERHDLPIGIHAGSSLRNPPSPLGWSSHYIDDYVSQAPGFSGALNSLVVEGVFNKFPR LKVVLLESGVTWLPAHLWRANKQWRGVRSETPWLTRPPSEIIREHVRLTVQPFDAPPTDGQVQTIIDQIGSDEMLLFSTD YPHWHFDGTDAVPQGLSHESLSKMLADNALATYPRLN
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40316; Mature: 40316
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTMVSSPARPIDCDVHVALPDTRALLPYLDDYWREHVIRRGLDREDLELSSYPPSLPLS CCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC CRPDWRPQQGLPGSQFEQLRDQVLDPFQSRFAICNVLHGSQIMFSEDLSAALCRAINNWI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH SAEWLDRDPRLRASIVVPVHSPELAVAEIEHRAADLRFVQVLMLAMGEVPLGRRQNWPIY HHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE AAAERHDLPIGIHAGSSLRNPPSPLGWSSHYIDDYVSQAPGFSGALNSLVVEGVFNKFPR EECCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC LKVVLLESGVTWLPAHLWRANKQWRGVRSETPWLTRPPSEIIREHVRLTVQPFDAPPTDG EEEEEEECCCHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHEEEEEECCCCCCCC QVQTIIDQIGSDEMLLFSTDYPHWHFDGTDAVPQGLSHESLSKMLADNALATYPRLN HHHHHHHHCCCCCEEEEECCCCCEECCCCCHHCCCCCHHHHHHHHHHCHHHCCCCCC >Mature Secondary Structure MLTMVSSPARPIDCDVHVALPDTRALLPYLDDYWREHVIRRGLDREDLELSSYPPSLPLS CCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC CRPDWRPQQGLPGSQFEQLRDQVLDPFQSRFAICNVLHGSQIMFSEDLSAALCRAINNWI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH SAEWLDRDPRLRASIVVPVHSPELAVAEIEHRAADLRFVQVLMLAMGEVPLGRRQNWPIY HHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE AAAERHDLPIGIHAGSSLRNPPSPLGWSSHYIDDYVSQAPGFSGALNSLVVEGVFNKFPR EECCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC LKVVLLESGVTWLPAHLWRANKQWRGVRSETPWLTRPPSEIIREHVRLTVQPFDAPPTDG EEEEEEECCCHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHEEEEEECCCCCCCC QVQTIIDQIGSDEMLLFSTDYPHWHFDGTDAVPQGLSHESLSKMLADNALATYPRLN HHHHHHHHCCCCCEEEEECCCCCEECCCCCHHCCCCCHHHHHHHHHHCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA