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The map label for this gene is soxA [H]

Identifier: 13488245

GI number: 13488245

Start: 198211

End: 199491

Strand: Direct

Name: soxA [H]

Synonym: mlr9217

Alternate gene names: 13488245

Gene position: 198211-199491 (Clockwise)

Preceding gene: 13488244

Following gene: 13488246

Centisome position: 56.32

GC content: 59.09

Gene sequence:

>1281_bases
ATGAAGTTTGTAGCGTTTCTCTTGGCGGGGCCAACTTGCCATCATCATGCCATGTGGCGCCATCCGCAAACAGAGAATCG
GTTTCTCGACCCCGCGTTCTGGGAAACGCTGGGGAGAACGCTCGAGGCAGGCAGATTTGACGGACTGTTCTTCGCGGATG
TTCTCTCTTTCCATAACGAAACCACTATGACGCGAGGCGGGCAGATGTCGTTGCTTGATCCTGTCCCGCTAGTGGCGATG
ATGGCCCGGGCGACGTCGCGCATTGGACTCGGTGTGACATTGTCGACGACTTTCCAAGACCCCTATGCGATAGCCCGAGT
GCTTTCCTCGCTTGATGTGCTAAGTGGTGGCCGCATCGCCTGGAACATTGTGACTTCCTTTAGCGACCTGGATGCGCAGA
TCTTTGGCGAGGAGGCGCTCCTTCCGCGCAGTGAACGTTACGAGCGCGCCGAGGAGGTCCTGAAAGTGTGCCTCGACTTG
TGGACGGGGTGGGCGGACGGCGCGCTCGTCCTTGACAAGGAGAGCGGCGACTTCATTGATGAGGCGAAGGTGCGCCGCAC
CGAGATCGCCGGGAAATACGTCGGAGCAAGGGGCGTATTCACCGTCCCACCGAGCCCTCAGCGACACCCGGTCATTATGC
AGGCCGGATCGTCACCGCGCGGCCGCGATTTTGCCGCCAGCCACGCCGAGCTTGTCTTTACGCTTCAGCACTCGTTGCCG
GACATGCAGGAATTTTATGCCGAGATGAAGGATCGCGTCGGCAGGGCGGGGCGGAATCCGGACGATTGCGCCATCCTTGT
CTCAGTGGACCCGATCGTCGGCGAAACGAACTCGCTTGCCCGCGAAAAGCAGGCTTACATCAATGACTTGGTCGACCCTC
ACGTCGGAATCCCCTTCATGTCTGACCACACCGGGCTCGATCTGTCGCAGTATCCGGTCGACAAGCCAATCATCGACATC
CCGGCAGAAACCGGCTCGCGCGGTTCCTTCGATATCATCCTTCAAGGCACCAAGGCCAACAATCTCACGCTCGGCGAAGC
GGCCAAGCATTTTGCCGTAAGCGAACTCTGCCCTCAAGTCGTGGGCACGCCCGAGACCGTGGCCGACCAGCTTCAGGATT
TCTTCGAAAATAAGGGCTGTGATGGCTTCATCGTTACGCCCACCGAAATGCCAGGCTCCTTCGAGGCCTTCACGCGATCG
GTCGTCCCGATCCTCCAGAAGCGCGGTCTATTCCGCAAGGAGTATCCGGGCTCGACTCTGAGGGAAACGATCAAAGCGTA
A

Upstream 100 bases:

>100_bases
AGTTACCTAGCTGGACGTTTTCTCCGTCGGCACGTCCCTTGCAATGAGAACAGCATATACATCAAAAGCCAAATTGAAGG
ATCCCAGAATGTCTCGCCAG

Downstream 100 bases:

>100_bases
GCGATCCGATGACGTGACAATTGGAACTACCGAAGCGGCGTTCCGGGTACCGAACTGACCACAGCTTAGACGGTCCCTTC
GATGAGGACTTCGACGACAT

Product: dibenzothiophene desulfurization enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MKFVAFLLAGPTCHHHAMWRHPQTENRFLDPAFWETLGRTLEAGRFDGLFFADVLSFHNETTMTRGGQMSLLDPVPLVAM
MARATSRIGLGVTLSTTFQDPYAIARVLSSLDVLSGGRIAWNIVTSFSDLDAQIFGEEALLPRSERYERAEEVLKVCLDL
WTGWADGALVLDKESGDFIDEAKVRRTEIAGKYVGARGVFTVPPSPQRHPVIMQAGSSPRGRDFAASHAELVFTLQHSLP
DMQEFYAEMKDRVGRAGRNPDDCAILVSVDPIVGETNSLAREKQAYINDLVDPHVGIPFMSDHTGLDLSQYPVDKPIIDI
PAETGSRGSFDIILQGTKANNLTLGEAAKHFAVSELCPQVVGTPETVADQLQDFFENKGCDGFIVTPTEMPGSFEAFTRS
VVPILQKRGLFRKEYPGSTLRETIKA

Sequences:

>Translated_426_residues
MKFVAFLLAGPTCHHHAMWRHPQTENRFLDPAFWETLGRTLEAGRFDGLFFADVLSFHNETTMTRGGQMSLLDPVPLVAM
MARATSRIGLGVTLSTTFQDPYAIARVLSSLDVLSGGRIAWNIVTSFSDLDAQIFGEEALLPRSERYERAEEVLKVCLDL
WTGWADGALVLDKESGDFIDEAKVRRTEIAGKYVGARGVFTVPPSPQRHPVIMQAGSSPRGRDFAASHAELVFTLQHSLP
DMQEFYAEMKDRVGRAGRNPDDCAILVSVDPIVGETNSLAREKQAYINDLVDPHVGIPFMSDHTGLDLSQYPVDKPIIDI
PAETGSRGSFDIILQGTKANNLTLGEAAKHFAVSELCPQVVGTPETVADQLQDFFENKGCDGFIVTPTEMPGSFEAFTRS
VVPILQKRGLFRKEYPGSTLRETIKA
>Mature_426_residues
MKFVAFLLAGPTCHHHAMWRHPQTENRFLDPAFWETLGRTLEAGRFDGLFFADVLSFHNETTMTRGGQMSLLDPVPLVAM
MARATSRIGLGVTLSTTFQDPYAIARVLSSLDVLSGGRIAWNIVTSFSDLDAQIFGEEALLPRSERYERAEEVLKVCLDL
WTGWADGALVLDKESGDFIDEAKVRRTEIAGKYVGARGVFTVPPSPQRHPVIMQAGSSPRGRDFAASHAELVFTLQHSLP
DMQEFYAEMKDRVGRAGRNPDDCAILVSVDPIVGETNSLAREKQAYINDLVDPHVGIPFMSDHTGLDLSQYPVDKPIIDI
PAETGSRGSFDIILQGTKANNLTLGEAAKHFAVSELCPQVVGTPETVADQLQDFFENKGCDGFIVTPTEMPGSFEAFTRS
VVPILQKRGLFRKEYPGSTLRETIKA

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. This enzyme metabolizes DBT-sulfone (DBTO2 or DBT 5,5-dioxide) to 2- hydroxybiphenyl (2-HBP) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]

Homologues:

Organism=Escherichia coli, GI1787247, Length=346, Percent_Identity=23.9884393063584, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR016215 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 46962; Mature: 46962

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFVAFLLAGPTCHHHAMWRHPQTENRFLDPAFWETLGRTLEAGRFDGLFFADVLSFHNE
CCEEEEEEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
TTMTRGGQMSLLDPVPLVAMMARATSRIGLGVTLSTTFQDPYAIARVLSSLDVLSGGRIA
CCCCCCCCEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEE
WNIVTSFSDLDAQIFGEEALLPRSERYERAEEVLKVCLDLWTGWADGALVLDKESGDFID
EEEECCHHHCCHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHH
EAKVRRTEIAGKYVGARGVFTVPPSPQRHPVIMQAGSSPRGRDFAASHAELVFTLQHSLP
HHHHHHHHHHHHEECCCCEEECCCCCCCCCEEEECCCCCCCCCHHCCCHHEEEEEHHCCC
DMQEFYAEMKDRVGRAGRNPDDCAILVSVDPIVGETNSLAREKQAYINDLVDPHVGIPFM
HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
SDHTGLDLSQYPVDKPIIDIPAETGSRGSFDIILQGTKANNLTLGEAAKHFAVSELCPQV
CCCCCCCHHHCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
VGTPETVADQLQDFFENKGCDGFIVTPTEMPGSFEAFTRSVVPILQKRGLFRKEYPGSTL
CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHH
RETIKA
HHHHCC
>Mature Secondary Structure
MKFVAFLLAGPTCHHHAMWRHPQTENRFLDPAFWETLGRTLEAGRFDGLFFADVLSFHNE
CCEEEEEEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
TTMTRGGQMSLLDPVPLVAMMARATSRIGLGVTLSTTFQDPYAIARVLSSLDVLSGGRIA
CCCCCCCCEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEE
WNIVTSFSDLDAQIFGEEALLPRSERYERAEEVLKVCLDLWTGWADGALVLDKESGDFID
EEEECCHHHCCHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHH
EAKVRRTEIAGKYVGARGVFTVPPSPQRHPVIMQAGSSPRGRDFAASHAELVFTLQHSLP
HHHHHHHHHHHHEECCCCEEECCCCCCCCCEEEECCCCCCCCCHHCCCHHEEEEEHHCCC
DMQEFYAEMKDRVGRAGRNPDDCAILVSVDPIVGETNSLAREKQAYINDLVDPHVGIPFM
HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
SDHTGLDLSQYPVDKPIIDIPAETGSRGSFDIILQGTKANNLTLGEAAKHFAVSELCPQV
CCCCCCCHHHCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
VGTPETVADQLQDFFENKGCDGFIVTPTEMPGSFEAFTRSVVPILQKRGLFRKEYPGSTL
CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHH
RETIKA
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]