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The map label for this gene is dppC [H]

Identifier: 13488242

GI number: 13488242

Start: 192177

End: 193001

Strand: Direct

Name: dppC [H]

Synonym: mlr9213

Alternate gene names: 13488242

Gene position: 192177-193001 (Clockwise)

Preceding gene: 13488241

Following gene: 13488243

Centisome position: 54.61

GC content: 63.76

Gene sequence:

>825_bases
ATGCTCGATATCAAACGCATACCGATCCCGGCGCTGATCGGGATCGTGCTGACGGCCATGTTTGTCCTGGCGGCGATCTT
CGGCCCGTTGATCGCTCCGCACGGCAATGGCGAGATCATCGGCGATGTCTGGGAACCGATGACTGCGGCGCACTGGCTTG
GCACCGACAATCTCGGCCGTGACCTATTGTCCCGCATGATCTACGGCGCCCGCATCACGCTGTTCATCGCCGTGCTGGCG
ACGGCGCTGTCGTTCTCGCTCGGCGCCATCCTCGGCTTCTCAGCCGCGGTGTTCGGCGGCTGGTTCGACATGCTCCTGTC
GCGCCTCGTCGACCTGCTGATGTCGATCCCGACACTGATCATGGGCCTGGTCGTGCTCTCGGTGCTGCCCTCCAACCTGG
TGACGCTGATCCTGGTCATGGGCATTCTCGACTCAACCCGGGTCTACCGGCTGTCGCGGGCGGTCGCCGTGGACATCAAC
GTGATGGACTATGTCGAGGCCGCCAAGCTGCGCGGCGAAGGCAGCGGCTGGATCATTTTCCGCGAGATCCTGCCCAACGC
GCTGTCGCCGCTGGTGTCCGAACTTGGACTGCGCTTCATCTATGCGGTGCTGTTTTTGTCGACGCTCTCCTTCCTCGGCC
TTGGCGTGCAGCCGCCAGATGCCGACTGGGGCGCCATGGTCAAGGAGAACAAGGACGGCATCGTGTTCGGCATCGGGGCG
GCGCTGATCCCGGCGGCGGCGATCGCCATGCTGGCGATTTCAGTCAATCTCGTCGCCGACTGGGTGCTCAACCGCACGAC
CAGTTTGAAGGGAGGACGCGGCTGA

Upstream 100 bases:

>100_bases
CCTGATCTTCGCCGCCGTCTATATCAGCCTCAACATCATCGCGGACATTGCGGCGATCGTCGCTAATCCACGGCTCAGAC
ATCCGAAATAGGCGCCGGGC

Downstream 100 bases:

>100_bases
TGGCTGACACGAAAACGAAACCCGGCGTGCTGCTCGACATCCGCAATCTGCGCATCGAGGCCACTGTCTATCCGCCAGGC
GAGTCGCCGAGGAATATCAC

Product: dipeptide transport system permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MLDIKRIPIPALIGIVLTAMFVLAAIFGPLIAPHGNGEIIGDVWEPMTAAHWLGTDNLGRDLLSRMIYGARITLFIAVLA
TALSFSLGAILGFSAAVFGGWFDMLLSRLVDLLMSIPTLIMGLVVLSVLPSNLVTLILVMGILDSTRVYRLSRAVAVDIN
VMDYVEAAKLRGEGSGWIIFREILPNALSPLVSELGLRFIYAVLFLSTLSFLGLGVQPPDADWGAMVKENKDGIVFGIGA
ALIPAAAIAMLAISVNLVADWVLNRTTSLKGGRG

Sequences:

>Translated_274_residues
MLDIKRIPIPALIGIVLTAMFVLAAIFGPLIAPHGNGEIIGDVWEPMTAAHWLGTDNLGRDLLSRMIYGARITLFIAVLA
TALSFSLGAILGFSAAVFGGWFDMLLSRLVDLLMSIPTLIMGLVVLSVLPSNLVTLILVMGILDSTRVYRLSRAVAVDIN
VMDYVEAAKLRGEGSGWIIFREILPNALSPLVSELGLRFIYAVLFLSTLSFLGLGVQPPDADWGAMVKENKDGIVFGIGA
ALIPAAAIAMLAISVNLVADWVLNRTTSLKGGRG
>Mature_274_residues
MLDIKRIPIPALIGIVLTAMFVLAAIFGPLIAPHGNGEIIGDVWEPMTAAHWLGTDNLGRDLLSRMIYGARITLFIAVLA
TALSFSLGAILGFSAAVFGGWFDMLLSRLVDLLMSIPTLIMGLVVLSVLPSNLVTLILVMGILDSTRVYRLSRAVAVDIN
VMDYVEAAKLRGEGSGWIIFREILPNALSPLVSELGLRFIYAVLFLSTLSFLGLGVQPPDADWGAMVKENKDGIVFGIGA
ALIPAAAIAMLAISVNLVADWVLNRTTSLKGGRG

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=259, Percent_Identity=32.8185328185328, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1787054, Length=252, Percent_Identity=31.3492063492063, Blast_Score=137, Evalue=7e-34,
Organism=Escherichia coli, GI1789964, Length=247, Percent_Identity=36.8421052631579, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1787549, Length=257, Percent_Identity=29.9610894941634, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1789889, Length=212, Percent_Identity=29.7169811320755, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1787498, Length=262, Percent_Identity=28.6259541984733, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1788505, Length=190, Percent_Identity=27.3684210526316, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29228; Mature: 29228

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]