| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
Click here to switch to the map view.
The map label for this gene is 13488133
Identifier: 13488133
GI number: 13488133
Start: 223577
End: 224029
Strand: Reverse
Name: 13488133
Synonym: mll9244
Alternate gene names: NA
Gene position: 224029-223577 (Counterclockwise)
Preceding gene: 13488339
Following gene: 13488132
Centisome position: 63.66
GC content: 58.5
Gene sequence:
>453_bases GTGCCGATATTTAAAAACAAGACAGAAGACAGCGATGGCTGGCTTTCGATCCTGCTCGCACTGCGACTTCGCCAAATCGA GAACGAGTACCCGGACTATGCGAGTTTCGCCGACGCTACTGGGCTGTCGCGTGGCACGCTCTACCAGTTGCGGACGGGGA AGGGAAACCCGACGTTCGTTACTCTTGAGCGTCTGGCACGGCATCTGAAGGTGCCGGTGTGGACGCTGATCGGCCGGACT GGTGACGACGACAGCGTGAAGCGGGACATCGAGACGTTCGCCTTCAACTTCAACGAGATTGCGCGGCATATTGAGGCCAC GCGTGCTGTGAAACGCTCGATGACGGAGTTCAGCGGTGTACCTTCTTTGAAAGAGGCAGCCAGCCCCGCTGGGGCAAGTT CCGAGAAGAAGCGGCTACCTCCGGCCAAAAAGGGACGCAGGACAAACCGGTAG
Upstream 100 bases:
>100_bases TGATGGGGCGATGTGTCATCGTTTCGGTCTACCGACCTAACCACTAGACATTTTACGGAAAATAGCGGTCATATTCCGAC CGATAAGCAGGAGTGCAGCT
Downstream 100 bases:
>100_bases CATGCAAGTAAAGTAGAAGATGCTAAACAATCAGCGTAGATGCATTTGCTACGATAGGCAGCAAATCTATTCTATATTTC TTTGACTCGCATCAGAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MPIFKNKTEDSDGWLSILLALRLRQIENEYPDYASFADATGLSRGTLYQLRTGKGNPTFVTLERLARHLKVPVWTLIGRT GDDDSVKRDIETFAFNFNEIARHIEATRAVKRSMTEFSGVPSLKEAASPAGASSEKKRLPPAKKGRRTNR
Sequences:
>Translated_150_residues MPIFKNKTEDSDGWLSILLALRLRQIENEYPDYASFADATGLSRGTLYQLRTGKGNPTFVTLERLARHLKVPVWTLIGRT GDDDSVKRDIETFAFNFNEIARHIEATRAVKRSMTEFSGVPSLKEAASPAGASSEKKRLPPAKKGRRTNR >Mature_149_residues PIFKNKTEDSDGWLSILLALRLRQIENEYPDYASFADATGLSRGTLYQLRTGKGNPTFVTLERLARHLKVPVWTLIGRTG DDDSVKRDIETFAFNFNEIARHIEATRAVKRSMTEFSGVPSLKEAASPAGASSEKKRLPPAKKGRRTNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16837; Mature: 16706
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIFKNKTEDSDGWLSILLALRLRQIENEYPDYASFADATGLSRGTLYQLRTGKGNPTFV CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCCCCCEE TLERLARHLKVPVWTLIGRTGDDDSVKRDIETFAFNFNEIARHIEATRAVKRSMTEFSGV EHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC PSLKEAASPAGASSEKKRLPPAKKGRRTNR CCHHHHCCCCCCCCCHHCCCCHHCCCCCCC >Mature Secondary Structure PIFKNKTEDSDGWLSILLALRLRQIENEYPDYASFADATGLSRGTLYQLRTGKGNPTFV CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCCCCCEE TLERLARHLKVPVWTLIGRTGDDDSVKRDIETFAFNFNEIARHIEATRAVKRSMTEFSGV EHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC PSLKEAASPAGASSEKKRLPPAKKGRRTNR CCHHHHCCCCCCCCCHHCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA