| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488130
Identifier: 13488130
GI number: 13488130
Start: 216638
End: 217258
Strand: Reverse
Name: 13488130
Synonym: mll9232
Alternate gene names: NA
Gene position: 217258-216638 (Counterclockwise)
Preceding gene: 13488131
Following gene: 13488129
Centisome position: 61.74
GC content: 53.62
Gene sequence:
>621_bases ATGAACGCCGGGGTCGGAAATGAGTGGCGCTCGGGCTATGTTGTCTGTCATTTTACTATGGGCTACATCGTCAGGGCAAA AGGGCCGAGCGACAGGCAAATTGTGCGCACGCATCGATTTATGAAGCGAAATGGAAAGGGCGAAGTGGACAACCCGCTTC GCGCCAACATCGCGACGGTCCTCGAGGCCGAACGCCGACAAAGGCGACTTCGTCACCAGGACATGGCGAAGTTGTTTCAT ACTTCGCCTGGTAAGGGTCTCGCCTACCGGACCTATATCAAAACTGCTCGGCGTAAGAACAATGTCACCTTGCGTACCCT AGACATGATGGCCCGTTCTCTTCGGATCTCGATTGCGACGTTGTTGACAGCCAAAACCGATATCGAGCCCTGGGTTCATG AGCTTGGAGACCAATCAATCCGGAAGCGCCTTGGCGCCATTATCAACAGTGAGCGCGAGCGCCGAAACCTTTTGCGCTAT CAGATGGCAGAGTTGATCGGCGTCTCGGAGATTACATTCGCGAAGTTGGAACGCGGCGCTGGAAATATCAGTGTCGATAC AATTGCTGGCATCGCTAAATCGCTATGTCTGGATCCCACGGCATTTCTGTTCCAAGACTAG
Upstream 100 bases:
>100_bases GGCTGGAATTGGCGCAGAGGATCTCGATGTTCAGTTCCGCCAGAGTTCGGCCGAACTGTGTCCTGCCGCGGCCAGCGCGC GCAATCGCTAAGGCTTACGA
Downstream 100 bases:
>100_bases ATGTCGTGTTGCCTCAAGGAATTTTGTTACCGGCTGCCTCATCAAGAATGTTACCCGCTCGCCAGACGTGCGGAGTCTGA AGCGACATACGGCGCTAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MNAGVGNEWRSGYVVCHFTMGYIVRAKGPSDRQIVRTHRFMKRNGKGEVDNPLRANIATVLEAERRQRRLRHQDMAKLFH TSPGKGLAYRTYIKTARRKNNVTLRTLDMMARSLRISIATLLTAKTDIEPWVHELGDQSIRKRLGAIINSERERRNLLRY QMAELIGVSEITFAKLERGAGNISVDTIAGIAKSLCLDPTAFLFQD
Sequences:
>Translated_206_residues MNAGVGNEWRSGYVVCHFTMGYIVRAKGPSDRQIVRTHRFMKRNGKGEVDNPLRANIATVLEAERRQRRLRHQDMAKLFH TSPGKGLAYRTYIKTARRKNNVTLRTLDMMARSLRISIATLLTAKTDIEPWVHELGDQSIRKRLGAIINSERERRNLLRY QMAELIGVSEITFAKLERGAGNISVDTIAGIAKSLCLDPTAFLFQD >Mature_206_residues MNAGVGNEWRSGYVVCHFTMGYIVRAKGPSDRQIVRTHRFMKRNGKGEVDNPLRANIATVLEAERRQRRLRHQDMAKLFH TSPGKGLAYRTYIKTARRKNNVTLRTLDMMARSLRISIATLLTAKTDIEPWVHELGDQSIRKRLGAIINSERERRNLLRY QMAELIGVSEITFAKLERGAGNISVDTIAGIAKSLCLDPTAFLFQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23426; Mature: 23426
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAGVGNEWRSGYVVCHFTMGYIVRAKGPSDRQIVRTHRFMKRNGKGEVDNPLRANIATV CCCCCCCCCCCCEEEEEEEECEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LEAERRQRRLRHQDMAKLFHTSPGKGLAYRTYIKTARRKNNVTLRTLDMMARSLRISIAT HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH LLTAKTDIEPWVHELGDQSIRKRLGAIINSERERRNLLRYQMAELIGVSEITFAKLERGA HHHHCCCCHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC GNISVDTIAGIAKSLCLDPTAFLFQD CCCCHHHHHHHHHHHHCCCHHHHHCC >Mature Secondary Structure MNAGVGNEWRSGYVVCHFTMGYIVRAKGPSDRQIVRTHRFMKRNGKGEVDNPLRANIATV CCCCCCCCCCCCEEEEEEEECEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LEAERRQRRLRHQDMAKLFHTSPGKGLAYRTYIKTARRKNNVTLRTLDMMARSLRISIAT HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH LLTAKTDIEPWVHELGDQSIRKRLGAIINSERERRNLLRYQMAELIGVSEITFAKLERGA HHHHCCCCHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC GNISVDTIAGIAKSLCLDPTAFLFQD CCCCHHHHHHHHHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA