| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 1057 [H]
Identifier: 15603877
GI number: 15603877
Start: 2254152
End: 2254763
Strand: Direct
Name: 1057 [H]
Synonym: PM2012
Alternate gene names: 15603877
Gene position: 2254152-2254763 (Clockwise)
Preceding gene: 15603876
Following gene: 15603878
Centisome position: 99.85
GC content: 39.05
Gene sequence:
>612_bases ATGGCTTATACTGCGGAAGAAGAACAAGAGCTAAATGAGATTAAAACATGGTGGAAGGAAAATTATAAAACTTTAATCGC CTCGGTCATTATTGCATTTGGTGGTGTGTTCGGTTGGAATTACTGGCAAAGTCATCAGTTAAATAAAATTCAACAAACTT CAGCTCAGTATGAACAGGCACTGTATAGTACAGCAGATTTTGCTAGCAAGAGTGCGCAAATTGAGCAGTTTGTACAAGCG AACAGCAAAACCAGTTATGCGGTTTTAGCCTTGTTAGAAAAGGCAAAAGTTGAAGTGGAAAAAAAGGAGTTTGCCCAAGC AGAGCAATCCTTAAAACAAGCCCTAGCGCAGTCAACAGATGAAAACTTATCCTCGATTACAGCATTACGTTTAGCATCAG TACAATACCAACAACAAGCCTTTGACATGGCATTAGACAGCTTGAAACAGGTGAAAGAAAGCAGTTGGGATAGTCGTAAA AACTTACTGATTGGTGATATTTTATTAGCCAAAGGGGATAAGGTGGCGGCAAAAGCCAGTTATCAACAAGCGTTAAATAA TGCCTCACCATTAGAAGCACAGTGGTTACAAGTGCGGTTGAATAATTTATAA
Upstream 100 bases:
>100_bases GGTTAAACACTTACTTGGTGGAGCCGAGCAACAAACACTTGCATTAGATGATATTGTTGATTACATTAAGAACAATTTTT AATCGAGAAGGAAGAGGAAA
Downstream 100 bases:
>100_bases ATTTACTTGAAAGGCTTGGAAGGTATTTTCCAAGCCTTTTTTCTTTCTCTTTTTTTGTTAACCCAAGGCATATTTAGGGT AAATAAGCTGTGTTGATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MAYTAEEEQELNEIKTWWKENYKTLIASVIIAFGGVFGWNYWQSHQLNKIQQTSAQYEQALYSTADFASKSAQIEQFVQA NSKTSYAVLALLEKAKVEVEKKEFAQAEQSLKQALAQSTDENLSSITALRLASVQYQQQAFDMALDSLKQVKESSWDSRK NLLIGDILLAKGDKVAAKASYQQALNNASPLEAQWLQVRLNNL
Sequences:
>Translated_203_residues MAYTAEEEQELNEIKTWWKENYKTLIASVIIAFGGVFGWNYWQSHQLNKIQQTSAQYEQALYSTADFASKSAQIEQFVQA NSKTSYAVLALLEKAKVEVEKKEFAQAEQSLKQALAQSTDENLSSITALRLASVQYQQQAFDMALDSLKQVKESSWDSRK NLLIGDILLAKGDKVAAKASYQQALNNASPLEAQWLQVRLNNL >Mature_202_residues AYTAEEEQELNEIKTWWKENYKTLIASVIIAFGGVFGWNYWQSHQLNKIQQTSAQYEQALYSTADFASKSAQIEQFVQAN SKTSYAVLALLEKAKVEVEKKEFAQAEQSLKQALAQSTDENLSSITALRLASVQYQQQAFDMALDSLKQVKESSWDSRKN LLIGDILLAKGDKVAAKASYQQALNNASPLEAQWLQVRLNNL
Specific function: Unknown
COG id: COG2976
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0070 family [H]
Homologues:
Organism=Escherichia coli, GI1788860, Length=198, Percent_Identity=33.8383838383838, Blast_Score=120, Evalue=5e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018704 - InterPro: IPR011990 [H]
Pfam domain/function: PF09976 DUF2133 [H]
EC number: NA
Molecular weight: Translated: 22893; Mature: 22762
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYTAEEEQELNEIKTWWKENYKTLIASVIIAFGGVFGWNYWQSHQLNKIQQTSAQYEQA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LYSTADFASKSAQIEQFVQANSKTSYAVLALLEKAKVEVEKKEFAQAEQSLKQALAQSTD HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH ENLSSITALRLASVQYQQQAFDMALDSLKQVKESSWDSRKNLLIGDILLAKGDKVAAKAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHCCCHHHHHHH YQQALNNASPLEAQWLQVRLNNL HHHHHCCCCCCHHHHHHHHHCCC >Mature Secondary Structure AYTAEEEQELNEIKTWWKENYKTLIASVIIAFGGVFGWNYWQSHQLNKIQQTSAQYEQA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LYSTADFASKSAQIEQFVQANSKTSYAVLALLEKAKVEVEKKEFAQAEQSLKQALAQSTD HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH ENLSSITALRLASVQYQQQAFDMALDSLKQVKESSWDSRKNLLIGDILLAKGDKVAAKAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHCCCHHHHHHH YQQALNNASPLEAQWLQVRLNNL HHHHHCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA