| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is yfgA [C]
Identifier: 15603874
GI number: 15603874
Start: 2250746
End: 2251702
Strand: Direct
Name: yfgA [C]
Synonym: PM2009
Alternate gene names: 15603874
Gene position: 2250746-2251702 (Clockwise)
Preceding gene: 15603873
Following gene: 15603875
Centisome position: 99.7
GC content: 42.01
Gene sequence:
>957_bases ATGAATACTGCGACAAATAATATTGAGGAAAAAGTACTCACTCTCGGCGAACAATTCCGCCAAGCACGCGAGGCGCTTAA CCTTTCCATTGAAGATGTTTCTAAAAAAATCTCTCTTAGACCCTCTATTTTACAATTGATTGAAACGAATCAATTGGCTC AAAAGTCAATTCCAGCCACTTTTATGAGAGGTTATGTTCGCAGTTACGCTAAATTTCTCAAATTACCTGAATCCGTATGG GTACATGCAAGTTTTGGTGAAGATCATAAGAATGATCTAGGTAAAAATGCACGTGCAACCAGAGCGGTTAACCATTATTC CTCGCATAACCACTGGATTGGTTGGTTAAGTTTACTTGTTGTTCTCATTGTGGCGGGGATGACGGGTCTGTGGTGGTGGG AAAACTATACTCAGTCTAATGCCGAGCGCGAGAGTTTAGTGCAACATTACGTTGACACAACACCGCAAAGTAGCGTCGTA CAAAGCACACCAATAGCGAGTTCTACTGCATTGACGGATACTACACAAAATGCGACAGTGCTCAGTGCCTCAAGTGTAGT GATACCGACGACACAAACCACCTCTTCCACTGATCTTCCTGTGACGATCAGCCCAGTAAGTGACCAGCCGATCACGTCTG CAGATGTGTTAAAAGCGGAAATGGAAAAATTAGATGAAAAAAGCGAGAAAAATCTTCTTTCACATGAGACGGTGGTGACC CCTTCTCATGAATTGCACATTGAAGTCACTGGTGGTTGTTGGATTAGTGTGCAAAATGAGAGTGGAAAGATTCTTGCACA AAAAGAATACAAACAAGGTGATGTGTTGACGTTTAATGAAGGTGTGACTTATTCACTGATTATAGGTGCGCCAGCAAATG TTAAGATCACATATAAAGGCGAAGACTATCCGCTAAAAGTAGATGGTCGTGTCGCTCGATTTAAATTACCACAGTAA
Upstream 100 bases:
>100_bases ACACTTTTTCACATAGCTTATCTAGCGAATAGCTATTGCAAAAGCCCCTGTACAACTTTAAACTTTACCCTTTGGATTTT GTGTAAATAGATGGTGTGAA
Downstream 100 bases:
>100_bases TGTGGCTGATAAGGTAGCAAACAATTATGTTAGCCAAACCAACGATTAAGCGTAGAGAATCAACCAAAATCTATGTGGGG AACGTGCCGATTGGTGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MNTATNNIEEKVLTLGEQFRQAREALNLSIEDVSKKISLRPSILQLIETNQLAQKSIPATFMRGYVRSYAKFLKLPESVW VHASFGEDHKNDLGKNARATRAVNHYSSHNHWIGWLSLLVVLIVAGMTGLWWWENYTQSNAERESLVQHYVDTTPQSSVV QSTPIASSTALTDTTQNATVLSASSVVIPTTQTTSSTDLPVTISPVSDQPITSADVLKAEMEKLDEKSEKNLLSHETVVT PSHELHIEVTGGCWISVQNESGKILAQKEYKQGDVLTFNEGVTYSLIIGAPANVKITYKGEDYPLKVDGRVARFKLPQ
Sequences:
>Translated_318_residues MNTATNNIEEKVLTLGEQFRQAREALNLSIEDVSKKISLRPSILQLIETNQLAQKSIPATFMRGYVRSYAKFLKLPESVW VHASFGEDHKNDLGKNARATRAVNHYSSHNHWIGWLSLLVVLIVAGMTGLWWWENYTQSNAERESLVQHYVDTTPQSSVV QSTPIASSTALTDTTQNATVLSASSVVIPTTQTTSSTDLPVTISPVSDQPITSADVLKAEMEKLDEKSEKNLLSHETVVT PSHELHIEVTGGCWISVQNESGKILAQKEYKQGDVLTFNEGVTYSLIIGAPANVKITYKGEDYPLKVDGRVARFKLPQ >Mature_318_residues MNTATNNIEEKVLTLGEQFRQAREALNLSIEDVSKKISLRPSILQLIETNQLAQKSIPATFMRGYVRSYAKFLKLPESVW VHASFGEDHKNDLGKNARATRAVNHYSSHNHWIGWLSLLVVLIVAGMTGLWWWENYTQSNAERESLVQHYVDTTPQSSVV QSTPIASSTALTDTTQNATVLSASSVVIPTTQTTSSTDLPVTISPVSDQPITSADVLKAEMEKLDEKSEKNLLSHETVVT PSHELHIEVTGGCWISVQNESGKILAQKEYKQGDVLTFNEGVTYSLIIGAPANVKITYKGEDYPLKVDGRVARFKLPQ
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788864, Length=326, Percent_Identity=26.3803680981595, Blast_Score=99, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35238; Mature: 35238
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTATNNIEEKVLTLGEQFRQAREALNLSIEDVSKKISLRPSILQLIETNQLAQKSIPAT CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHH FMRGYVRSYAKFLKLPESVWVHASFGEDHKNDLGKNARATRAVNHYSSHNHWIGWLSLLV HHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHH VLIVAGMTGLWWWENYTQSNAERESLVQHYVDTTPQSSVVQSTPIASSTALTDTTQNATV HHHHHCCCHHEEECCHHHCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEECCCCCCCEE LSASSVVIPTTQTTSSTDLPVTISPVSDQPITSADVLKAEMEKLDEKSEKNLLSHETVVT EEECEEEEECCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEC PSHELHIEVTGGCWISVQNESGKILAQKEYKQGDVLTFNEGVTYSLIIGAPANVKITYKG CCCEEEEEEECCEEEEEECCCCCEEEECCCCCCCEEEECCCCEEEEEEECCCCEEEEECC EDYPLKVDGRVARFKLPQ CCCEEEECCEEEEEECCC >Mature Secondary Structure MNTATNNIEEKVLTLGEQFRQAREALNLSIEDVSKKISLRPSILQLIETNQLAQKSIPAT CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHH FMRGYVRSYAKFLKLPESVWVHASFGEDHKNDLGKNARATRAVNHYSSHNHWIGWLSLLV HHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHH VLIVAGMTGLWWWENYTQSNAERESLVQHYVDTTPQSSVVQSTPIASSTALTDTTQNATV HHHHHCCCHHEEECCHHHCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEECCCCCCCEE LSASSVVIPTTQTTSSTDLPVTISPVSDQPITSADVLKAEMEKLDEKSEKNLLSHETVVT EEECEEEEECCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEC PSHELHIEVTGGCWISVQNESGKILAQKEYKQGDVLTFNEGVTYSLIIGAPANVKITYKG CCCEEEEEEECCEEEEEECCCCCEEEECCCCCCCEEEECCCCEEEEEEECCCCEEEEECC EDYPLKVDGRVARFKLPQ CCCEEEECCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]