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The map label for this gene is skp

Identifier: 15603858

GI number: 15603858

Start: 2234993

End: 2235574

Strand: Direct

Name: skp

Synonym: PM1993

Alternate gene names: 15603858

Gene position: 2234993-2235574 (Clockwise)

Preceding gene: 15603857

Following gene: 15603859

Centisome position: 99.0

GC content: 37.11

Gene sequence:

>582_bases
ATGAAAAAAGCAGTCAAAGTTACCGCACTTTCTTTAGCATTAGCCTTTACTTCGTCTTTAGCCATGGCCACAGAAAATAT
TGCATTTATCAGTGGGGATTATTTATTTCAAAATCACCCAGATCGTAAAATGGTGGCAGAAAAATTAGAGTCAGAGTTTA
AAGCCAGAGTAGAAAAACTCACTGCAAATAAAAAAAGCATTGATGAAAAAATTGCCGCTTCTCAAAAGAAAGTTGAAGCC
AAAGTTGCTGCATTACAAAAAGATGCCCCGAAATTACGCAGTGCAGATATTAAAAAACGTGAAGAAGAAATCAATAAACT
CGGCAATAGCGAGCAAGAAGCGATCAATAAACTCGTTACTGCACATGATGAAGAAGTCAGTAAATATCAAGACGACTATG
CAAAACGTGAACGTGAAGAAACCGCAAAATTAGTGGATAGCATTCAAAACGCGGTAAATACGGTTGCAAGAGAGAAAAAC
TACACATTAGTACTGAATGAAGGTGCAGTCGTGTTTGCTGCAGATGCAAAAAATATTACTGAAGATGTTCTAAAAGTCAT
TCCTGCGACACAGGCGAAATAA

Upstream 100 bases:

>100_bases
TGGAACTTATGTAAAAAATTGTAGTCTAAACAGCCATCTGTGCCGTCAGCGTTCGGCACAGTATTTATTCATATCTTTAT
TGAAATAGGAAAAGAAACCA

Downstream 100 bases:

>100_bases
TGCAAGTTTATTCCCTCCAAGAATTAGCACAACAGATCGGCGCTACCATTCGTGGTAACGCCGATGTTGTTGTAGAAAGT
ATTGCGCCTTTAGATAAGGC

Product: Skp

Products: NA

Alternate protein names: p28

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MKKAVKVTALSLALAFTSSLAMATENIAFISGDYLFQNHPDRKMVAEKLESEFKARVEKLTANKKSIDEKIAASQKKVEA
KVAALQKDAPKLRSADIKKREEEINKLGNSEQEAINKLVTAHDEEVSKYQDDYAKREREETAKLVDSIQNAVNTVAREKN
YTLVLNEGAVVFAADAKNITEDVLKVIPATQAK

Sequences:

>Translated_193_residues
MKKAVKVTALSLALAFTSSLAMATENIAFISGDYLFQNHPDRKMVAEKLESEFKARVEKLTANKKSIDEKIAASQKKVEA
KVAALQKDAPKLRSADIKKREEEINKLGNSEQEAINKLVTAHDEEVSKYQDDYAKREREETAKLVDSIQNAVNTVAREKN
YTLVLNEGAVVFAADAKNITEDVLKVIPATQAK
>Mature_193_residues
MKKAVKVTALSLALAFTSSLAMATENIAFISGDYLFQNHPDRKMVAEKLESEFKARVEKLTANKKSIDEKIAASQKKVEA
KVAALQKDAPKLRSADIKKREEEINKLGNSEQEAINKLVTAHDEEVSKYQDDYAKREREETAKLVDSIQNAVNTVAREKN
YTLVLNEGAVVFAADAKNITEDVLKVIPATQAK

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the skp family

Homologues:

None

Paralogues:

None

Copy number: 580 Molecules/Cell In: Growth-Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): OM25_PASMU (Q51922)

Other databases:

- EMBL:   X74357
- EMBL:   AE004439
- PIR:   S47341
- RefSeq:   NP_246932.1
- ProteinModelPortal:   Q51922
- SMR:   Q51922
- GeneID:   1245340
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM1993
- NMPDR:   fig|272843.1.peg.1994
- HOGENOM:   HBG495360
- OMA:   GYTYVLD
- ProtClustDB:   CLSK870690
- BioCyc:   PMUL272843:PM1993-MONOMER
- InterPro:   IPR005632
- SMART:   SM00935

Pfam domain/function: PF03938 OmpH; SSF111384 OM_chaperone_Skp/OmpH

EC number: NA

Molecular weight: Translated: 21409; Mature: 21409

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAVKVTALSLALAFTSSLAMATENIAFISGDYLFQNHPDRKMVAEKLESEFKARVEKL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHH
TANKKSIDEKIAASQKKVEAKVAALQKDAPKLRSADIKKREEEINKLGNSEQEAINKLVT
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AHDEEVSKYQDDYAKREREETAKLVDSIQNAVNTVAREKNYTLVLNEGAVVFAADAKNIT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCHHHH
EDVLKVIPATQAK
HHHHHHHCCCCCC
>Mature Secondary Structure
MKKAVKVTALSLALAFTSSLAMATENIAFISGDYLFQNHPDRKMVAEKLESEFKARVEKL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHH
TANKKSIDEKIAASQKKVEAKVAALQKDAPKLRSADIKKREEEINKLGNSEQEAINKLVT
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AHDEEVSKYQDDYAKREREETAKLVDSIQNAVNTVAREKNYTLVLNEGAVVFAADAKNIT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCHHHH
EDVLKVIPATQAK
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7642134; 11248100