| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is yaeL [C]
Identifier: 15603856
GI number: 15603856
Start: 2231151
End: 2232479
Strand: Direct
Name: yaeL [C]
Synonym: PM1991
Alternate gene names: 15603856
Gene position: 2231151-2232479 (Clockwise)
Preceding gene: 15603855
Following gene: 15603857
Centisome position: 98.83
GC content: 41.23
Gene sequence:
>1329_bases ATGTCATTTTTATGGTCATTTGCGTCGTTTATTATTGTTATTAGTGTACTTGTTGCAGTCCATGAGTATGGGCACTTTTG GGCTGCGAGAAAGTGCGGTATTCAGGTTCATCGTTTTTCAATTGGTTTTGGTAAAGTACTTTGGTCGCGCACAGATAAAC AGGGAACTGAATTTGTCATATCTGCGATTCCACTCGGTGGTTATGTCAAAATGCTAGATGGACGTAATGAAGTGGTTCCG CCTGAATTGAGCTCACGTGCATTTGATCAAAAAAGTGTACTACAGCGCGCTTTCGTGATTGCAGCAGGTCCTATCGCGAA CTTCTTATTTGCGATTCTGGCATATTTTACGATTTATACTGTGGGTATCCCGACAGTAAAACCTGTCATTGCGGACATTT CATCAAATTCTATTGCTGCCCAAGCCCAGATTGAACCGAATACACAAATTATGGCGGTAGATGGCACAAAAGTGAGCGAT TGGGAAACCATTAATATGTTGTTGGCAACTAAGATGGGAAATGATGAAATTCACCTAACGTTATCGCCTTTTGGCTCGTC TATTGAGCAACATAAAGTACTCAATACGAAAGACTGGCGTTTTGATCCTGAAAAAGAAAGTGCCATGAGCTCACTTGGTC TGCAACCTGTGAGAACTAAAGTGGACATGATTTTGTCTAAGGTCGAGGTCAACTCACCTGCCGATAAAGCAGGCTTAAAA GCCGGTGATCGCATTTATGCGGGAGAGCAGTTAATTAGTTGGCAACAATTTGTACAGTTTGTACAAGAAGGAAAACCGTT TAATGTTAAGGTTGAACGTGATGGTCAGTTTTCCTTTGTTGTTCTGACACCAGAATTAAACAAAAAAGGACGCTGGTATG TGGGGATTGCGCCGACGGCAGCCCCGATCTCTGATATATATCGAACCGAATTAAAATATGGTATTCTTGAGGCCTTACAG AAAGGGGTTGAGAAGACGATACAGCTTTCATGGTTAACGATAAAAGTGATTGGCAAGCTCTTTACCGGTGATCTGGCTTT GAAGAATTTAGGTGGTCCGATTTCTATTGCGAAAGGTGCGGGCATCTCTTCTGAAATTGGGTTGATTTATTACCTCGGTT TTATGGCATTGATCAGTGTGAATTTAGGCATAATGAACTTATTTCCATTACCTGTTCTTGATGGTGGTCATTTAGTCTTT TTAGCGGCTGAGGCGGTCCGAGGTAAACCACTCTCAGAACGTATTCAAAATTTGAGTTATCGAATTGGTGCAGCGATATT AATGGCTTTAATGGGATTTGCACTCTTTAATGATTTCTTACGTTTATAA
Upstream 100 bases:
>100_bases TGGTATTTTAGATCGGATTGATAGTTTAACGGCGGCCGTTCCGTTCTTTGCTTATTTTTACTTTTTCGTGATTTCATGAT GCATTAGGAACAACAGATTT
Downstream 100 bases:
>100_bases TTAATTTTACTCACAGGATAACATTCACGATGAAAAAACTTTTAATTGCGAGCTTATTATTTGGTTCAACCACTGCATTT GCTGCGCCGTTTGTAGTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MSFLWSFASFIIVISVLVAVHEYGHFWAARKCGIQVHRFSIGFGKVLWSRTDKQGTEFVISAIPLGGYVKMLDGRNEVVP PELSSRAFDQKSVLQRAFVIAAGPIANFLFAILAYFTIYTVGIPTVKPVIADISSNSIAAQAQIEPNTQIMAVDGTKVSD WETINMLLATKMGNDEIHLTLSPFGSSIEQHKVLNTKDWRFDPEKESAMSSLGLQPVRTKVDMILSKVEVNSPADKAGLK AGDRIYAGEQLISWQQFVQFVQEGKPFNVKVERDGQFSFVVLTPELNKKGRWYVGIAPTAAPISDIYRTELKYGILEALQ KGVEKTIQLSWLTIKVIGKLFTGDLALKNLGGPISIAKGAGISSEIGLIYYLGFMALISVNLGIMNLFPLPVLDGGHLVF LAAEAVRGKPLSERIQNLSYRIGAAILMALMGFALFNDFLRL
Sequences:
>Translated_442_residues MSFLWSFASFIIVISVLVAVHEYGHFWAARKCGIQVHRFSIGFGKVLWSRTDKQGTEFVISAIPLGGYVKMLDGRNEVVP PELSSRAFDQKSVLQRAFVIAAGPIANFLFAILAYFTIYTVGIPTVKPVIADISSNSIAAQAQIEPNTQIMAVDGTKVSD WETINMLLATKMGNDEIHLTLSPFGSSIEQHKVLNTKDWRFDPEKESAMSSLGLQPVRTKVDMILSKVEVNSPADKAGLK AGDRIYAGEQLISWQQFVQFVQEGKPFNVKVERDGQFSFVVLTPELNKKGRWYVGIAPTAAPISDIYRTELKYGILEALQ KGVEKTIQLSWLTIKVIGKLFTGDLALKNLGGPISIAKGAGISSEIGLIYYLGFMALISVNLGIMNLFPLPVLDGGHLVF LAAEAVRGKPLSERIQNLSYRIGAAILMALMGFALFNDFLRL >Mature_441_residues SFLWSFASFIIVISVLVAVHEYGHFWAARKCGIQVHRFSIGFGKVLWSRTDKQGTEFVISAIPLGGYVKMLDGRNEVVPP ELSSRAFDQKSVLQRAFVIAAGPIANFLFAILAYFTIYTVGIPTVKPVIADISSNSIAAQAQIEPNTQIMAVDGTKVSDW ETINMLLATKMGNDEIHLTLSPFGSSIEQHKVLNTKDWRFDPEKESAMSSLGLQPVRTKVDMILSKVEVNSPADKAGLKA GDRIYAGEQLISWQQFVQFVQEGKPFNVKVERDGQFSFVVLTPELNKKGRWYVGIAPTAAPISDIYRTELKYGILEALQK GVEKTIQLSWLTIKVIGKLFTGDLALKNLGGPISIAKGAGISSEIGLIYYLGFMALISVNLGIMNLFPLPVLDGGHLVFL AAEAVRGKPLSERIQNLSYRIGAAILMALMGFALFNDFLRL
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain
Homologues:
Organism=Escherichia coli, GI1786373, Length=449, Percent_Identity=53.2293986636971, Blast_Score=480, Evalue=1e-137,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1991_PASMU (Q9CJL2)
Other databases:
- EMBL: AE004439 - RefSeq: NP_246930.1 - ProteinModelPortal: Q9CJL2 - MEROPS: M50.004 - GeneID: 1245338 - GenomeReviews: AE004439_GR - KEGG: pmu:PM1991 - NMPDR: fig|272843.1.peg.1992 - HOGENOM: HBG664087 - OMA: HGTEFVV - ProtClustDB: CLSK870688 - BioCyc: PMUL272843:PM1991-MONOMER - GO: GO:0006508 - InterPro: IPR001478 - InterPro: IPR004387 - InterPro: IPR008915 - SMART: SM00228 - TIGRFAMs: TIGR00054
Pfam domain/function: PF00595 PDZ; PF02163 Peptidase_M50; SSF50156 PDZ
EC number: NA
Molecular weight: Translated: 48609; Mature: 48478
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS50106 PDZ; PS00142 ZINC_PROTEASE
Important sites: ACT_SITE 22-22
Signals:
None
Transmembrane regions:
HASH(0xd6eda80)-; HASH(0xea4c760)-; HASH(0xf1eff90)-;
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLWSFASFIIVISVLVAVHEYGHFWAARKCGIQVHRFSIGFGKVLWSRTDKQGTEFVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCCCCCEEEE SAIPLGGYVKMLDGRNEVVPPELSSRAFDQKSVLQRAFVIAAGPIANFLFAILAYFTIYT EEECCCCEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VGIPTVKPVIADISSNSIAAQAQIEPNTQIMAVDGTKVSDWETINMLLATKMGNDEIHLT CCCCCHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHEEEEEEECCCCEEEEE LSPFGSSIEQHKVLNTKDWRFDPEKESAMSSLGLQPVRTKVDMILSKVEVNSPADKAGLK ECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHCCC AGDRIYAGEQLISWQQFVQFVQEGKPFNVKVERDGQFSFVVLTPELNKKGRWYVGIAPTA CCCEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEECCCC APISDIYRTELKYGILEALQKGVEKTIQLSWLTIKVIGKLFTGDLALKNLGGPISIAKGA CHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHCCHHHHHCCCCEEEECCC GISSEIGLIYYLGFMALISVNLGIMNLFPLPVLDGGHLVFLAAEAVRGKPLSERIQNLSY CCCCCHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCEEEEEEHHHCCCCHHHHHHHHHH RIGAAILMALMGFALFNDFLRL HHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure SFLWSFASFIIVISVLVAVHEYGHFWAARKCGIQVHRFSIGFGKVLWSRTDKQGTEFVI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCCCCCEEEE SAIPLGGYVKMLDGRNEVVPPELSSRAFDQKSVLQRAFVIAAGPIANFLFAILAYFTIYT EEECCCCEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VGIPTVKPVIADISSNSIAAQAQIEPNTQIMAVDGTKVSDWETINMLLATKMGNDEIHLT CCCCCHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHEEEEEEECCCCEEEEE LSPFGSSIEQHKVLNTKDWRFDPEKESAMSSLGLQPVRTKVDMILSKVEVNSPADKAGLK ECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHCCC AGDRIYAGEQLISWQQFVQFVQEGKPFNVKVERDGQFSFVVLTPELNKKGRWYVGIAPTA CCCEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEECCCC APISDIYRTELKYGILEALQKGVEKTIQLSWLTIKVIGKLFTGDLALKNLGGPISIAKGA CHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHCCHHHHHCCCCEEEECCC GISSEIGLIYYLGFMALISVNLGIMNLFPLPVLDGGHLVFLAAEAVRGKPLSERIQNLSY CCCCCHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCEEEEEEHHHCCCCHHHHHHHHHH RIGAAILMALMGFALFNDFLRL HHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11248100