| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
Click here to switch to the map view.
The map label for this gene is yhiI [H]
Identifier: 15603848
GI number: 15603848
Start: 2223665
End: 2224771
Strand: Reverse
Name: yhiI [H]
Synonym: PM1983
Alternate gene names: 15603848
Gene position: 2224771-2223665 (Counterclockwise)
Preceding gene: 15603879
Following gene: 15603847
Centisome position: 98.55
GC content: 42.28
Gene sequence:
>1107_bases ATGTTATTTTTCAAAAGTCAAAATAACGGGGTGCTTTATACCATAAAGAACGGTCAATTTCTAGCAATTTTTTCACAACA GGTCCGATTTGTGCTACAATCTTGTTCACATTACATATCTTTCATTTATAAGGAGATCGTAATGAAAAAATGGCTCTTTA TGCTTCCACTCATTGTCATTGGATGTGGCGTTTACTGGACACACTATCATCATGATAACCAACATACCGATATTGTGTCT TCAAATGGGCGTTTGGAATTTTTACGATTAGATGTTGCCAGTTTGTATGCCGGACGCGTCGAACAAGTCTTGGTCAAAGA AGGCGACTATGTCAACAAAGATACGCTTCTAGCAACCCTCTCTTCTGATACGGTTAAAACCCAAGTCGATACGGCCTTCG CGCGAAAACAACAAGCCCAACAAGCAGTAAAACGCGTACAAGCACAACTCAGTGCACAACAGCAACAACTCAACACCGCC CTATTAGATGTCGATAATGCACATAAATTGCGCAAAAATCAGCTAATTTCCTCAAGCGAATTTGAAAAACGTCTTGCTTT ACGCGATGCTGCCCAAGCCAATTTACACGCATTAGACATCGCTGTACAAGAAGCACAAAGCAGCGTGGCGCAAGCGGATG CCCAATTACGGCAAGCACATGCTATTTTAGCAGATTTACAGATTAAAGCGCCTCAAGCAGGACGCGTTGTCTATAAATTA GTTGAAGTAGGCAATGTGATCGCTGCGGGACAAAAAGTCGTTAGCCTATTGGATCTTAATGAAGCCAGTATGTACTTGTT TTTTCCAGCCCCTATCGTCAATCAAATTCCCTTACAAAGTGAAGCACGTCTTGTATTTGACGGTCTCGAGGCTGTTTTCC CTGCCACCGTTAGCTATGTATCAAGTGATGCACAATTTACGCCTAAATTTGTTGAAACCACGACAGAACGGGAAAAATTG ATGTTTAAAGTCAAATTGCAGATCCCCTCAGATATCGCACAAAAATATGCTGACTATCTGAAAGGCGGTATGACGGGAAA TGGTTATATCCGGCTTTCCTCGTCCACTGAGTGGCCAGCCGAGCTACAACTTCACTTACCAGACTAA
Upstream 100 bases:
>100_bases ATTGGGGTTTAGCCTCCACATACCAAGCAAATCGACCGTTTGGCACCCCGATTTACCCTCACGATATGTGTGTGATGTCT AAGTTAAAAATTAAATGTGA
Downstream 100 bases:
>100_bases GCGCAGGAGGGAGTATGAACACAATTCGTGTCGTGAATGTGACCCATACTTACCAAAAAACGACCGCACTTGATCAAGTG TCACTCTCACTTCCTGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MLFFKSQNNGVLYTIKNGQFLAIFSQQVRFVLQSCSHYISFIYKEIVMKKWLFMLPLIVIGCGVYWTHYHHDNQHTDIVS SNGRLEFLRLDVASLYAGRVEQVLVKEGDYVNKDTLLATLSSDTVKTQVDTAFARKQQAQQAVKRVQAQLSAQQQQLNTA LLDVDNAHKLRKNQLISSSEFEKRLALRDAAQANLHALDIAVQEAQSSVAQADAQLRQAHAILADLQIKAPQAGRVVYKL VEVGNVIAAGQKVVSLLDLNEASMYLFFPAPIVNQIPLQSEARLVFDGLEAVFPATVSYVSSDAQFTPKFVETTTEREKL MFKVKLQIPSDIAQKYADYLKGGMTGNGYIRLSSSTEWPAELQLHLPD
Sequences:
>Translated_368_residues MLFFKSQNNGVLYTIKNGQFLAIFSQQVRFVLQSCSHYISFIYKEIVMKKWLFMLPLIVIGCGVYWTHYHHDNQHTDIVS SNGRLEFLRLDVASLYAGRVEQVLVKEGDYVNKDTLLATLSSDTVKTQVDTAFARKQQAQQAVKRVQAQLSAQQQQLNTA LLDVDNAHKLRKNQLISSSEFEKRLALRDAAQANLHALDIAVQEAQSSVAQADAQLRQAHAILADLQIKAPQAGRVVYKL VEVGNVIAAGQKVVSLLDLNEASMYLFFPAPIVNQIPLQSEARLVFDGLEAVFPATVSYVSSDAQFTPKFVETTTEREKL MFKVKLQIPSDIAQKYADYLKGGMTGNGYIRLSSSTEWPAELQLHLPD >Mature_368_residues MLFFKSQNNGVLYTIKNGQFLAIFSQQVRFVLQSCSHYISFIYKEIVMKKWLFMLPLIVIGCGVYWTHYHHDNQHTDIVS SNGRLEFLRLDVASLYAGRVEQVLVKEGDYVNKDTLLATLSSDTVKTQVDTAFARKQQAQQAVKRVQAQLSAQQQQLNTA LLDVDNAHKLRKNQLISSSEFEKRLALRDAAQANLHALDIAVQEAQSSVAQADAQLRQAHAILADLQIKAPQAGRVVYKL VEVGNVIAAGQKVVSLLDLNEASMYLFFPAPIVNQIPLQSEARLVFDGLEAVFPATVSYVSSDAQFTPKFVETTTEREKL MFKVKLQIPSDIAQKYADYLKGGMTGNGYIRLSSSTEWPAELQLHLPD
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789900, Length=344, Percent_Identity=31.1046511627907, Blast_Score=174, Evalue=1e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 41225; Mature: 41225
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFFKSQNNGVLYTIKNGQFLAIFSQQVRFVLQSCSHYISFIYKEIVMKKWLFMLPLIVI CEEEEECCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GCGVYWTHYHHDNQHTDIVSSNGRLEFLRLDVASLYAGRVEQVLVKEGDYVNKDTLLATL HCCHHEEEEECCCCCCCEEECCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEE SSDTVKTQVDTAFARKQQAQQAVKRVQAQLSAQQQQLNTALLDVDNAHKLRKNQLISSSE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHH FEKRLALRDAAQANLHALDIAVQEAQSSVAQADAQLRQAHAILADLQIKAPQAGRVVYKL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCHHHHHHH VEVGNVIAAGQKVVSLLDLNEASMYLFFPAPIVNQIPLQSEARLVFDGLEAVFPATVSYV HHHCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHH SSDAQFTPKFVETTTEREKLMFKVKLQIPSDIAQKYADYLKGGMTGNGYIRLSSSTEWPA CCCCCCCCHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC ELQLHLPD EEEEECCC >Mature Secondary Structure MLFFKSQNNGVLYTIKNGQFLAIFSQQVRFVLQSCSHYISFIYKEIVMKKWLFMLPLIVI CEEEEECCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GCGVYWTHYHHDNQHTDIVSSNGRLEFLRLDVASLYAGRVEQVLVKEGDYVNKDTLLATL HCCHHEEEEECCCCCCCEEECCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEE SSDTVKTQVDTAFARKQQAQQAVKRVQAQLSAQQQQLNTALLDVDNAHKLRKNQLISSSE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHH FEKRLALRDAAQANLHALDIAVQEAQSSVAQADAQLRQAHAILADLQIKAPQAGRVVYKL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCHHHHHHH VEVGNVIAAGQKVVSLLDLNEASMYLFFPAPIVNQIPLQSEARLVFDGLEAVFPATVSYV HHHCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHH SSDAQFTPKFVETTTEREKLMFKVKLQIPSDIAQKYADYLKGGMTGNGYIRLSSSTEWPA CCCCCCCCHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC ELQLHLPD EEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]