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The map label for this gene is ibeB [H]

Identifier: 15603845

GI number: 15603845

Start: 2218391

End: 2219782

Strand: Reverse

Name: ibeB [H]

Synonym: PM1980

Alternate gene names: 15603845

Gene position: 2219782-2218391 (Counterclockwise)

Preceding gene: 15603846

Following gene: 15603838

Centisome position: 98.33

GC content: 44.18

Gene sequence:

>1392_bases
ATGCAAAAAACAATGATGACTTTTCTGCTCAGCAGCATGCTACTGGGCTGTCAGCAGACCGAAGTGGATTTACAGTCTAA
TATCCAATTACCTGATGTTTATCAATATGCACGCCTAGAAAAGGGGGCGCCAATCGTCCAAAATTGGTGGGAAAGCTGGC
AAGATCCACAACTTAGCCGTTTAATCCAGCAAGGTTTAGCACAAAACCACCAACTTGCGATCGCTAAAAGTAAAATACAA
GAAGCACAAGCAATCGTGAAAATCGCACAATCCACGCGTTTCCCTACTATTGGTGCCCTTGCCAATAGCGGTAAATCTCA
CCTTGATATTGAACAAATTGATATCACGCCAAGCGGTGTATTAGGTGGCATACGTGTTGCTTGGGAGCCTGATATTTTTG
GACAAAAACGCAGTGATACTGATGCTGCGCAAGCCACCGTATTGGGCGCTCAACAACAGTTTTATGCTGCGCAAATCCTT
GTGGCAAGTGAAATTGCCCATTATTACTTGCAAGCGCTCCACAACAAAAAACAACAAGCGTTATTACAACGTACTCAAAT
GGCGCTAAAAGCCTTACAAAACTATATTGAGGGACGCTTTAATGCGGGGCAAGCTAGTGCTTATGAGCGCAATGAAATCA
AAATAAAACGCCACTCTCTTGCAGCCAAACAAGCGATACTCGATGCCCAATTTATTGCCGCCCAAAATGCGATTGCCGTG
CTGATTGGAGAAACGCCACAACACTTTAAGTTGGATATTGGGCAAATGCAAAACGTGGATATCCTCTCTCACTTACCGCG
ACCACCAAAAGGGATACAACCTGCTGATTTACTGCATCAGCGTCCTGATATTCAAGCCCAAACTGCCAATGTGAAAGCCC
ACGCAGCTAAATTAGCCAGTGCTAAAGCGGATTTATTTCCCCGCTTCACACTCGATTTCCTCTGGCAAACCGGACGTATT
AAATTAGACGCGGACTTACCGACATTACAAGCTTGGCAAAACGTTGTCAGCGCAGGAATCCAGTTACCGATTTTCACTGC
AGGACGTATCCAAGCGAACATTCAGGCAAGCGATGAACGCTTACAACAAGCCTTACTTCAATATGATCGCACTTTATTAC
AAGCTCTAGCAGAAGTCGAAAATCACTATCAACAACAATTTTCACTCACTCAGCAAGCACGTTTATTAACACAGGCAAGT
CGCACTCAGCAACAGCAAGTACGTGATACACAGAAATTGTTTCAATATGGCGACTATACCTTTGATCGTGTATTGCAAGC
GCGCCTCGATGCCTTGACCTTAGAAGAAAAACAGCTTGAAAATCAACTGGCTTGTGCCATGAATTTAGTCTTGTTATACA
AAGCTATCGGCGTTGGTTGGCAATCGCAATAA

Upstream 100 bases:

>100_bases
GCCGAAAGTATTGATGATAAGCCTAATGGGCGCATTTTTTATTGTAGTGGCGATTTTCCGTTTTAGACACATGCTCGCGC
GTCAAAGCTAAGGAGCGATT

Downstream 100 bases:

>100_bases
TGCCTTCTACTTTCCTGATACGAAAAAAAGCCTAGCAAATTCGCTAGGCTCTCATGTCACAAGTTTTACGTCTTATTGCT
CTTCATTTTGCTGGAAGAAC

Product: IbeB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MQKTMMTFLLSSMLLGCQQTEVDLQSNIQLPDVYQYARLEKGAPIVQNWWESWQDPQLSRLIQQGLAQNHQLAIAKSKIQ
EAQAIVKIAQSTRFPTIGALANSGKSHLDIEQIDITPSGVLGGIRVAWEPDIFGQKRSDTDAAQATVLGAQQQFYAAQIL
VASEIAHYYLQALHNKKQQALLQRTQMALKALQNYIEGRFNAGQASAYERNEIKIKRHSLAAKQAILDAQFIAAQNAIAV
LIGETPQHFKLDIGQMQNVDILSHLPRPPKGIQPADLLHQRPDIQAQTANVKAHAAKLASAKADLFPRFTLDFLWQTGRI
KLDADLPTLQAWQNVVSAGIQLPIFTAGRIQANIQASDERLQQALLQYDRTLLQALAEVENHYQQQFSLTQQARLLTQAS
RTQQQQVRDTQKLFQYGDYTFDRVLQARLDALTLEEKQLENQLACAMNLVLLYKAIGVGWQSQ

Sequences:

>Translated_463_residues
MQKTMMTFLLSSMLLGCQQTEVDLQSNIQLPDVYQYARLEKGAPIVQNWWESWQDPQLSRLIQQGLAQNHQLAIAKSKIQ
EAQAIVKIAQSTRFPTIGALANSGKSHLDIEQIDITPSGVLGGIRVAWEPDIFGQKRSDTDAAQATVLGAQQQFYAAQIL
VASEIAHYYLQALHNKKQQALLQRTQMALKALQNYIEGRFNAGQASAYERNEIKIKRHSLAAKQAILDAQFIAAQNAIAV
LIGETPQHFKLDIGQMQNVDILSHLPRPPKGIQPADLLHQRPDIQAQTANVKAHAAKLASAKADLFPRFTLDFLWQTGRI
KLDADLPTLQAWQNVVSAGIQLPIFTAGRIQANIQASDERLQQALLQYDRTLLQALAEVENHYQQQFSLTQQARLLTQAS
RTQQQQVRDTQKLFQYGDYTFDRVLQARLDALTLEEKQLENQLACAMNLVLLYKAIGVGWQSQ
>Mature_463_residues
MQKTMMTFLLSSMLLGCQQTEVDLQSNIQLPDVYQYARLEKGAPIVQNWWESWQDPQLSRLIQQGLAQNHQLAIAKSKIQ
EAQAIVKIAQSTRFPTIGALANSGKSHLDIEQIDITPSGVLGGIRVAWEPDIFGQKRSDTDAAQATVLGAQQQFYAAQIL
VASEIAHYYLQALHNKKQQALLQRTQMALKALQNYIEGRFNAGQASAYERNEIKIKRHSLAAKQAILDAQFIAAQNAIAV
LIGETPQHFKLDIGQMQNVDILSHLPRPPKGIQPADLLHQRPDIQAQTANVKAHAAKLASAKADLFPRFTLDFLWQTGRI
KLDADLPTLQAWQNVVSAGIQLPIFTAGRIQANIQASDERLQQALLQYDRTLLQALAEVENHYQQQFSLTQQARLLTQAS
RTQQQQVRDTQKLFQYGDYTFDRVLQARLDALTLEEKQLENQLACAMNLVLLYKAIGVGWQSQ

Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI1786785, Length=469, Percent_Identity=25.1599147121535, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI2367348, Length=438, Percent_Identity=24.4292237442922, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010131 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 51946; Mature: 51946

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKTMMTFLLSSMLLGCQQTEVDLQSNIQLPDVYQYARLEKGAPIVQNWWESWQDPQLSR
CCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCHHHHH
LIQQGLAQNHQLAIAKSKIQEAQAIVKIAQSTRFPTIGALANSGKSHLDIEQIDITPSGV
HHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEECCCCCCC
LGGIRVAWEPDIFGQKRSDTDAAQATVLGAQQQFYAAQILVASEIAHYYLQALHNKKQQA
CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
LLQRTQMALKALQNYIEGRFNAGQASAYERNEIKIKRHSLAAKQAILDAQFIAAQNAIAV
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCEEE
LIGETPQHFKLDIGQMQNVDILSHLPRPPKGIQPADLLHQRPDIQAQTANVKAHAAKLAS
EECCCCCCEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHCCCCCCEECCCHHHHHHHHHH
AKADLFPRFTLDFLWQTGRIKLDADLPTLQAWQNVVSAGIQLPIFTAGRIQANIQASDER
HHHHHCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCEEEECCCEEEECCHHHHH
LQQALLQYDRTLLQALAEVENHYQQQFSLTQQARLLTQASRTQQQQVRDTQKLFQYGDYT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
FDRVLQARLDALTLEEKQLENQLACAMNLVLLYKAIGVGWQSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQKTMMTFLLSSMLLGCQQTEVDLQSNIQLPDVYQYARLEKGAPIVQNWWESWQDPQLSR
CCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCHHHHH
LIQQGLAQNHQLAIAKSKIQEAQAIVKIAQSTRFPTIGALANSGKSHLDIEQIDITPSGV
HHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEECCCCCCC
LGGIRVAWEPDIFGQKRSDTDAAQATVLGAQQQFYAAQILVASEIAHYYLQALHNKKQQA
CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
LLQRTQMALKALQNYIEGRFNAGQASAYERNEIKIKRHSLAAKQAILDAQFIAAQNAIAV
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCEEE
LIGETPQHFKLDIGQMQNVDILSHLPRPPKGIQPADLLHQRPDIQAQTANVKAHAAKLAS
EECCCCCCEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHCCCCCCEECCCHHHHHHHHHH
AKADLFPRFTLDFLWQTGRIKLDADLPTLQAWQNVVSAGIQLPIFTAGRIQANIQASDER
HHHHHCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCEEEECCCEEEECCHHHHH
LQQALLQYDRTLLQALAEVENHYQQQFSLTQQARLLTQASRTQQQQVRDTQKLFQYGDYT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
FDRVLQARLDALTLEEKQLENQLACAMNLVLLYKAIGVGWQSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]