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The map label for this gene is ypfJ [H]

Identifier: 15603838

GI number: 15603838

Start: 2208818

End: 2209645

Strand: Reverse

Name: ypfJ [H]

Synonym: PM1973

Alternate gene names: 15603838

Gene position: 2209645-2208818 (Counterclockwise)

Preceding gene: 15603845

Following gene: 15603837

Centisome position: 97.88

GC content: 45.53

Gene sequence:

>828_bases
ATGCGTTGGCGTGGTCGTAGAGAAAGCACAAATGTAGAAGATCGTCGTGCCTCAAGCGGTGGTTTAGGTGGCGGTAAGAA
AACAGGCATCTTAGGCATCATTATTTTACTCATTGGTGCCTATTACGGTGTAGACTTATCCAGTTTAGTCGGCACTCCCG
ATTTTGGCATGCAACAATCCAGTCCATTGGCGAGTGAAGAAGAACAAGAGCTCAACAGTTTATCTAGAGTAGTGCTTGCG
GATACAGAAACCGTATGGGGCAATTATTTTGCTAGACAGCAACAACGCTATCAAGCCCCTGTGATGGTGCTCTATAACCG
TGTGACTCACACCGCTTGTGGTACAGGGCAATCGGCTATGGGACCGTTTTATTGCCCAAATGATCGCAAAGTGTATCTGG
ATTTATCCTTTTATCAGGACATGAAAACGAAACTTGGTGCTGACGGCGAAGCAGCATTTGCTTATGTAATTGCACATGAA
GTGGGGCATCATATCCAAAACCTTCTTGGTATCTTACCGAAAGTACATCAACTGCAAGGACAAACAAGCCGAACCCAAGC
CAATCAACTTTCCGTTAAAGTAGAACTCCAAGCAGATTGCTTTGCCGGTGTTTGGGCATATCAAGCGTCAAAAACGGGCT
TATTTGAAACTGGTGATATTGAAAAAGCTTTCAATGCCGCTGAGGCGGTAGGAGATGATCGCCTACAAAAACGCAGTCAA
GGCTATGTCGTTCCCGATAGCTTTACCCATGGCACCTCAGCACAACGCTTACATTGGTTCAAACGTGGCTTAAACAGCGG
CGACCCTAATCAATGTAATACATTCTGA

Upstream 100 bases:

>100_bases
CAAATCTTTACATAACTTGAAAATTTTTGCATAAATTTGACCGCACTTTGAACAATCTAGGCTAAAATACGCTTTTGATG
ACAACAAGTGAGAACATATT

Downstream 100 bases:

>100_bases
TCTTTTTTAGCAAAGTGCGCTATTCATTGAAAACATGTTTATCGCACTTTTTTGTTCTTATTCCCTTCCTTACTATCTTC
TTTCTGCATTACCTTGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MRWRGRRESTNVEDRRASSGGLGGGKKTGILGIIILLIGAYYGVDLSSLVGTPDFGMQQSSPLASEEEQELNSLSRVVLA
DTETVWGNYFARQQQRYQAPVMVLYNRVTHTACGTGQSAMGPFYCPNDRKVYLDLSFYQDMKTKLGADGEAAFAYVIAHE
VGHHIQNLLGILPKVHQLQGQTSRTQANQLSVKVELQADCFAGVWAYQASKTGLFETGDIEKAFNAAEAVGDDRLQKRSQ
GYVVPDSFTHGTSAQRLHWFKRGLNSGDPNQCNTF

Sequences:

>Translated_275_residues
MRWRGRRESTNVEDRRASSGGLGGGKKTGILGIIILLIGAYYGVDLSSLVGTPDFGMQQSSPLASEEEQELNSLSRVVLA
DTETVWGNYFARQQQRYQAPVMVLYNRVTHTACGTGQSAMGPFYCPNDRKVYLDLSFYQDMKTKLGADGEAAFAYVIAHE
VGHHIQNLLGILPKVHQLQGQTSRTQANQLSVKVELQADCFAGVWAYQASKTGLFETGDIEKAFNAAEAVGDDRLQKRSQ
GYVVPDSFTHGTSAQRLHWFKRGLNSGDPNQCNTF
>Mature_275_residues
MRWRGRRESTNVEDRRASSGGLGGGKKTGILGIIILLIGAYYGVDLSSLVGTPDFGMQQSSPLASEEEQELNSLSRVVLA
DTETVWGNYFARQQQRYQAPVMVLYNRVTHTACGTGQSAMGPFYCPNDRKVYLDLSFYQDMKTKLGADGEAAFAYVIAHE
VGHHIQNLLGILPKVHQLQGQTSRTQANQLSVKVELQADCFAGVWAYQASKTGLFETGDIEKAFNAAEAVGDDRLQKRSQ
GYVVPDSFTHGTSAQRLHWFKRGLNSGDPNQCNTF

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=284, Percent_Identity=58.0985915492958, Blast_Score=332, Evalue=2e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 30306; Mature: 30306

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWRGRRESTNVEDRRASSGGLGGGKKTGILGIIILLIGAYYGVDLSSLVGTPDFGMQQS
CCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCC
SPLASEEEQELNSLSRVVLADTETVWGNYFARQQQRYQAPVMVLYNRVTHTACGTGQSAM
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC
GPFYCPNDRKVYLDLSFYQDMKTKLGADGEAAFAYVIAHEVGHHIQNLLGILPKVHQLQG
CCCCCCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QTSRTQANQLSVKVELQADCFAGVWAYQASKTGLFETGDIEKAFNAAEAVGDDRLQKRSQ
CCHHHHHCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHC
GYVVPDSFTHGTSAQRLHWFKRGLNSGDPNQCNTF
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRWRGRRESTNVEDRRASSGGLGGGKKTGILGIIILLIGAYYGVDLSSLVGTPDFGMQQS
CCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCC
SPLASEEEQELNSLSRVVLADTETVWGNYFARQQQRYQAPVMVLYNRVTHTACGTGQSAM
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC
GPFYCPNDRKVYLDLSFYQDMKTKLGADGEAAFAYVIAHEVGHHIQNLLGILPKVHQLQG
CCCCCCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QTSRTQANQLSVKVELQADCFAGVWAYQASKTGLFETGDIEKAFNAAEAVGDDRLQKRSQ
CCHHHHHCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHC
GYVVPDSFTHGTSAQRLHWFKRGLNSGDPNQCNTF
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]