Click here to switch to the map view.

The map label for this gene is yhbP [C]

Identifier: 15603823

GI number: 15603823

Start: 2197057

End: 2197506

Strand: Reverse

Name: yhbP [C]

Synonym: PM1958

Alternate gene names: 15603823

Gene position: 2197506-2197057 (Counterclockwise)

Preceding gene: 15603824

Following gene: 15603819

Centisome position: 97.34

GC content: 36.89

Gene sequence:

>450_bases
ATGCATAAGCGAGTAGTTGATTTTATTAAGAAACAATACTTATTTACTCTTGCCTGTACAGAAAATAATCTCCCTTGGGC
AAATGCCTTTTATTATGTTTTCGACGAAAAAGAAAATAGATTAATTTATATTACAGGTGATCAAACTCATCATGCGAAAG
TGCTTCGCAATAACTCGCGTGTTGCAGGTACCATTTTTGTTCCCACAAAATTTGTCCCCTCTCTACAAGGTGTACAATTT
ACAGGTCGCTCGAGTCAATTATTTTCAACACAAGCAGAACAAGCCCGTGCTTTATATAAAACTGAATATTCACATCACTT
AATTGATCAACTCACGGTTTGGCAAGTTGAACTGGAGTATGTTCGTTTAGTGGATAATTCACTCGGCTTATTTAGTACGA
TAGAATGGCGTAAAGGGCAAGTAGTGGAAGAAACAGACCACTATGCCTAA

Upstream 100 bases:

>100_bases
GTATTTATTATGAATAAGCTATTTACTCTCTGTACAAAATTGTGTCAAAATAAAAATAGTTTTTAACATTTTTCGTAAAA
AATAATAATGAGAAAAATAT

Downstream 100 bases:

>100_bases
AACGTGCAATACAAATAGGTTAATGTAGCTGTAATTGGCGACGAATTTTGCGTAAAAGTAAAAAGACCCACGGCCATAAC
AGCCCGCTCGCCAATGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MHKRVVDFIKKQYLFTLACTENNLPWANAFYYVFDEKENRLIYITGDQTHHAKVLRNNSRVAGTIFVPTKFVPSLQGVQF
TGRSSQLFSTQAEQARALYKTEYSHHLIDQLTVWQVELEYVRLVDNSLGLFSTIEWRKGQVVEETDHYA

Sequences:

>Translated_149_residues
MHKRVVDFIKKQYLFTLACTENNLPWANAFYYVFDEKENRLIYITGDQTHHAKVLRNNSRVAGTIFVPTKFVPSLQGVQF
TGRSSQLFSTQAEQARALYKTEYSHHLIDQLTVWQVELEYVRLVDNSLGLFSTIEWRKGQVVEETDHYA
>Mature_149_residues
MHKRVVDFIKKQYLFTLACTENNLPWANAFYYVFDEKENRLIYITGDQTHHAKVLRNNSRVAGTIFVPTKFVPSLQGVQF
TGRSSQLFSTQAEQARALYKTEYSHHLIDQLTVWQVELEYVRLVDNSLGLFSTIEWRKGQVVEETDHYA

Specific function: Unknown

COG id: COG3787

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0306 family

Homologues:

Organism=Escherichia coli, GI1789544, Length=138, Percent_Identity=25.3623188405797, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1958_PASMU (Q9CJN9)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_246897.1
- ProteinModelPortal:   Q9CJN9
- GeneID:   1245305
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM1958
- NMPDR:   fig|272843.1.peg.1959
- HOGENOM:   HBG495611
- OMA:   WCANCFY
- ProtClustDB:   CLSK2459786
- BioCyc:   PMUL272843:PM1958-MONOMER
- HAMAP:   MF_00764
- InterPro:   IPR011576
- InterPro:   IPR012349
- InterPro:   IPR009002
- InterPro:   IPR011194
- Gene3D:   G3DSA:2.30.110.10
- PIRSF:   PIRSF009554

Pfam domain/function: PF01243 Pyridox_oxidase; SSF50475 FMN_binding

EC number: NA

Molecular weight: Translated: 17435; Mature: 17435

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKRVVDFIKKQYLFTLACTENNLPWANAFYYVFDEKENRLIYITGDQTHHAKVLRNNSR
CCHHHHHHHHHHEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCCCHHEEECCCC
VAGTIFVPTKFVPSLQGVQFTGRSSQLFSTQAEQARALYKTEYSHHLIDQLTVWQVELEY
EEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHEEEEEEEEEE
VRLVDNSLGLFSTIEWRKGQVVEETDHYA
EEEECCCCCCEEEEECCCCCEECCCCCCC
>Mature Secondary Structure
MHKRVVDFIKKQYLFTLACTENNLPWANAFYYVFDEKENRLIYITGDQTHHAKVLRNNSR
CCHHHHHHHHHHEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCCCHHEEECCCC
VAGTIFVPTKFVPSLQGVQFTGRSSQLFSTQAEQARALYKTEYSHHLIDQLTVWQVELEY
EEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHEEEEEEEEEE
VRLVDNSLGLFSTIEWRKGQVVEETDHYA
EEEECCCCCCEEEEECCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100