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The map label for this gene is 15603814

Identifier: 15603814

GI number: 15603814

Start: 2185304

End: 2186590

Strand: Reverse

Name: 15603814

Synonym: PM1949

Alternate gene names: NA

Gene position: 2186590-2185304 (Counterclockwise)

Preceding gene: 15603815

Following gene: 15603813

Centisome position: 96.86

GC content: 29.14

Gene sequence:

>1287_bases
ATGATTATGCATAGATTAGAAACAGTCCTTTTTTCAAATGGAGAACGTTTTCCTATATTGGTTAATGTTAAAACTGGTAT
TCCTGATTTTTATTCAACCTTATGGGTAACTGTAGAACTACGTAATCAATCCGCAGTAAACACAATTAGAAATAAGCTGG
GAACTATACAGTGGGTAATGAATTGGGAAAAACAGAATAATCTTGTTATTAGCGATCTAATTCATAACAAAGCACTCTTA
ACAGAAAACCAATTAGAATCTCTTATCCAACATATGAGAATAAATGTAAAAAAGCGAAAGAATGTAATCAATACAAAAAA
AAGTGTGTTAATGAAAGGTAGGACTCAATTTATTGATATTTATTCTGCCGTATCTCTTAGTCATCAATATAATAGACTAA
CAACGCTTTCAGAATACATATTATTTCTATCTAAAGTAATTAATGTATCTAATGAATATATTGAAAAATTGACGAAACTA
ATTACGTTAATTAAAGAGTCAAGACCTAAAAATCATAAAACATTATCTATCAAACCAGAAAGTGAGCTACCTGATGGATT
GTTAGATGAGTTTATGTCTATTGCGAACTTTTCTAATCCTAATAATCCATTTCAAGATATTGGAATTAGAAAAAGAAACC
ATTTGATGTTTATCTTATTAAAGGAATTAGGGATTAGAAGAGGAGAGCTATTATCAATTCAAATCCCATTTATTGATATA
GGAACAGCTAAATCCTCAATTACAATTAGACGAACGCATGATGATAAATTTGACACAAGGAAGAAGCAAGCTGTAAGTAA
AACGAAAGAAAGGCGACTTCCTATTTCACAAAATATAGCTCAACTTATCAATGACTATATTATGAACTATCGCTCTAAGA
TTCCTAACGCTAATAAACATCCATATTTATTTGTAACCCATCGAAAAGGAAAAACGCAAGGAAACCCAATTAGTACCAGT
TCTTTTGATAATGTTATTGTACCAACAATGAAAAAGATAGATTCTAAATTTTCTATTATTCATCCACATATTTTTCGTCA
TGAATGGAACTTAGATTTTTCACGAAAGGTGGATAAAAATAATCAAAATGTAAATCATGATTCTTCTCATAAAGATTTTA
TTTCTCCTGAAAAAGAAGCAAAGATGAGACAACATCTTATGGGGCATACATCCGAGAAATCAGGAAATATTTATAATCAA
CGTTATATAAGAGAAAAAGCTAACAAGATATTATTAGATCTTCAGATTCAGTTTCAAAAAAAGGTTGATAATTATGAATC
AGAATAA

Upstream 100 bases:

>100_bases
GAGAGAAGCCTTATAAAATAAGACTTCTCTTTTTTTACATTAATTTTGACACAACATCTTTAATTTGATAGTATTTATAT
ATGATATTTTTGTAAATTAA

Downstream 100 bases:

>100_bases
ACGTCTTAGACAGTCAAGAGATGGGTATGTATTTGATGAAAATGAAAACTCTTGGCATATAAGTAAAGACAAAACCATTA
ACTTTTCTCAACCCATATTA

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Integrase; Site-Specific Recombinase Phage Integrase Family; Integrase/Recombinase; Site Specific Recombinase; Tyrosine Recombinase XerD; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MIMHRLETVLFSNGERFPILVNVKTGIPDFYSTLWVTVELRNQSAVNTIRNKLGTIQWVMNWEKQNNLVISDLIHNKALL
TENQLESLIQHMRINVKKRKNVINTKKSVLMKGRTQFIDIYSAVSLSHQYNRLTTLSEYILFLSKVINVSNEYIEKLTKL
ITLIKESRPKNHKTLSIKPESELPDGLLDEFMSIANFSNPNNPFQDIGIRKRNHLMFILLKELGIRRGELLSIQIPFIDI
GTAKSSITIRRTHDDKFDTRKKQAVSKTKERRLPISQNIAQLINDYIMNYRSKIPNANKHPYLFVTHRKGKTQGNPISTS
SFDNVIVPTMKKIDSKFSIIHPHIFRHEWNLDFSRKVDKNNQNVNHDSSHKDFISPEKEAKMRQHLMGHTSEKSGNIYNQ
RYIREKANKILLDLQIQFQKKVDNYESE

Sequences:

>Translated_428_residues
MIMHRLETVLFSNGERFPILVNVKTGIPDFYSTLWVTVELRNQSAVNTIRNKLGTIQWVMNWEKQNNLVISDLIHNKALL
TENQLESLIQHMRINVKKRKNVINTKKSVLMKGRTQFIDIYSAVSLSHQYNRLTTLSEYILFLSKVINVSNEYIEKLTKL
ITLIKESRPKNHKTLSIKPESELPDGLLDEFMSIANFSNPNNPFQDIGIRKRNHLMFILLKELGIRRGELLSIQIPFIDI
GTAKSSITIRRTHDDKFDTRKKQAVSKTKERRLPISQNIAQLINDYIMNYRSKIPNANKHPYLFVTHRKGKTQGNPISTS
SFDNVIVPTMKKIDSKFSIIHPHIFRHEWNLDFSRKVDKNNQNVNHDSSHKDFISPEKEAKMRQHLMGHTSEKSGNIYNQ
RYIREKANKILLDLQIQFQKKVDNYESE
>Mature_428_residues
MIMHRLETVLFSNGERFPILVNVKTGIPDFYSTLWVTVELRNQSAVNTIRNKLGTIQWVMNWEKQNNLVISDLIHNKALL
TENQLESLIQHMRINVKKRKNVINTKKSVLMKGRTQFIDIYSAVSLSHQYNRLTTLSEYILFLSKVINVSNEYIEKLTKL
ITLIKESRPKNHKTLSIKPESELPDGLLDEFMSIANFSNPNNPFQDIGIRKRNHLMFILLKELGIRRGELLSIQIPFIDI
GTAKSSITIRRTHDDKFDTRKKQAVSKTKERRLPISQNIAQLINDYIMNYRSKIPNANKHPYLFVTHRKGKTQGNPISTS
SFDNVIVPTMKKIDSKFSIIHPHIFRHEWNLDFSRKVDKNNQNVNHDSSHKDFISPEKEAKMRQHLMGHTSEKSGNIYNQ
RYIREKANKILLDLQIQFQKKVDNYESE

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50031; Mature: 50031

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMHRLETVLFSNGERFPILVNVKTGIPDFYSTLWVTVELRNQSAVNTIRNKLGTIQWVM
CCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHEEEEEEEECCCHHHHHHHHHHCCEEEEE
NWEKQNNLVISDLIHNKALLTENQLESLIQHMRINVKKRKNVINTKKSVLMKGRTQFIDI
EECCCCCEEEEHHHHCHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHH
YSAVSLSHQYNRLTTLSEYILFLSKVINVSNEYIEKLTKLITLIKESRPKNHKTLSIKPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCC
SELPDGLLDEFMSIANFSNPNNPFQDIGIRKRNHLMFILLKELGIRRGELLSIQIPFIDI
CCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEEEHHHCCCCCCEEEEEECEEEE
GTAKSSITIRRTHDDKFDTRKKQAVSKTKERRLPISQNIAQLINDYIMNYRSKIPNANKH
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PYLFVTHRKGKTQGNPISTSSFDNVIVPTMKKIDSKFSIIHPHIFRHEWNLDFSRKVDKN
CEEEEEECCCCCCCCCCCCCCCCCEECHHHHHHCCCCEEECCHHEEEECCCCHHHCCCCC
NQNVNHDSSHKDFISPEKEAKMRQHLMGHTSEKSGNIYNQRYIREKANKILLDLQIQFQK
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCEEEEEEEEEHHH
KVDNYESE
HCCCCCCC
>Mature Secondary Structure
MIMHRLETVLFSNGERFPILVNVKTGIPDFYSTLWVTVELRNQSAVNTIRNKLGTIQWVM
CCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHEEEEEEEECCCHHHHHHHHHHCCEEEEE
NWEKQNNLVISDLIHNKALLTENQLESLIQHMRINVKKRKNVINTKKSVLMKGRTQFIDI
EECCCCCEEEEHHHHCHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHH
YSAVSLSHQYNRLTTLSEYILFLSKVINVSNEYIEKLTKLITLIKESRPKNHKTLSIKPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCC
SELPDGLLDEFMSIANFSNPNNPFQDIGIRKRNHLMFILLKELGIRRGELLSIQIPFIDI
CCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEEEHHHCCCCCCEEEEEECEEEE
GTAKSSITIRRTHDDKFDTRKKQAVSKTKERRLPISQNIAQLINDYIMNYRSKIPNANKH
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PYLFVTHRKGKTQGNPISTSSFDNVIVPTMKKIDSKFSIIHPHIFRHEWNLDFSRKVDKN
CEEEEEECCCCCCCCCCCCCCCCCEECHHHHHHCCCCEEECCHHEEEECCCCHHHCCCCC
NQNVNHDSSHKDFISPEKEAKMRQHLMGHTSEKSGNIYNQRYIREKANKILLDLQIQFQK
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCEEEEEEEEEHHH
KVDNYESE
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA